RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 C5orf38Q86SI9 138 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 TEN1Q86WV5 123 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 C15orf53Q8NAA6 179 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 NDUFA12Q9UI09 145 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 CHD6Q8TD26 2715 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 TRGV11A0A075B6L2 103 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 IGHV4-4A0A075B6R2 117 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 MYMXA0A1B0GTQ4 84 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 PRR20EP86478 221 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 PRR20CP86479 221 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 PRR20DP86480 221 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 PRR20BP86481 221 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 PRR20AP86496 221 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 UBE2WQ96B02 151 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 FXYD5Q96DB9 178 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 SPANXA1Q9NS26 97 aa2.8□□□□□ -1.96
PCDH11X-208ENST00000504220 TRBV25-1A0A075B6N4 114 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 UBE2E1P51965 193 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 SUMO4Q6EEV6 95 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 UNQ9165/PRO28630Q6UXU0 137 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 CEND1Q8N111 149 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 DYNAPQ8N1N2 210 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 PPDPFLQ8WWR9 84 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 RPL39LQ96EH5 51 aaKnown RBP2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 PRO1854Q9UHT4 67 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 COL12A1Q99715 3063 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 F8VRH5 84 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 IGLV2-23P01705 113 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 HOXB4P17483 251 aaPredicted RBP2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 BBC3Q96PG8 261 aaPredicted RBP2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 AGPAT4-IT1Q9H0P7 198 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 PEMTQ9UBM1 199 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 CSMD2Q7Z408 3487 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 LEPROTO15243 131 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 IGFL3Q6UXB1 125 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 Q8N2B8 174 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 MAPKAPK5-AS1Q8N8E1 139 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 ZNF491Q8N8L2 437 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 SPATA3Q8NHX4 192 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 MLST8Q9BVC4 326 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 SMIM2Q9BVW6 85 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 MRPL36Q9P0J6 103 aaKnown RBP2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 Q9UF83 564 aa2.79□□□□□ -1.96
PCDH11X-208ENST00000504220 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 IGKV1OR2-108A0A075B7D4 117 aa2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 IGKV3D-7A0A0C4DH55 119 aa2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 A0A0J9YXV3 536 aa2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 IGKV2-29A2NJV5 120 aaPredicted RBP2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 PRSS46E5RG02 174 aa2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 E7EUB6 86 aa2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 DAD1P61803 113 aa2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 LGALS9BQ3B8N2 356 aa2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 LGALS9CQ6DKI2 356 aa2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 FOXL2NBQ6ZUU3 175 aa2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 ANKRD29Q8N6D5 301 aa2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 Q8N8P6 123 aa2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 DAZ1Q9NQZ3 744 aaKnown RBP2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 VPS13CQ709C8 3753 aa2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 RPL39P62891 51 aaKnown RBP2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 LOXL1Q08397 574 aaPredicted RBP2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 DEFB136Q30KP8 78 aa2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 PATE2Q6UY27 113 aa2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 LYPD1Q8N2G4 141 aa2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 RNF223E7ERA6 249 aa2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 FHL2Q14192 279 aa2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 C11orf52Q96A22 123 aa2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 HELZ2Q9BYK8 2649 aaKnown RBP2.78□□□□□ -1.96
PCDH11X-208ENST00000504220 IGLV10-54A0A075B6I4 117 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 PRAC2D3DTV9 90 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 UBE2D1P51668 147 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 ZNF843Q8N446 348 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 PRR26Q8N8Z3 221 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 GFRA4Q9GZZ7 299 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 ZNF492Q9P255 531 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 CTSZQ9UBR2 303 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 FAM215AQ9Y5M1 114 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 CFAP46Q8IYW2 2715 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 TRBV7-1A0A0A6YYK4 115 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 IGHV4-28A0A0C4DH34 117 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 A0A0J9YY99 117 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 A8MU10 97 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 SOCS3O14543 225 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 UQCRQO14949 82 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 IGKV1-17P01599 117 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 C1orf195Q5TG92 126 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 MRPL53Q96EL3 112 aaKnown RBP2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 ZNF503Q96F45 646 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 IGF2BP2-AS1Q96M15 143 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 OPRPNQ99935 248 aaPredicted RBP2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 CUBNO60494 3623 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 XCL1P47992 114 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 PDE6HQ13956 83 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 DEFB105AQ8NG35 78 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 Q9H8V8 135 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 RETNQ9HD89 108 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 IGSF10Q6WRI0 2623 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 IGHV1OR15-1A0A075B7D0 117 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 CFC1BP0CG36 223 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 CFC1P0CG37 223 aa2.77□□□□□ -1.97
PCDH11X-208ENST00000504220 BLCAPP62952 87 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms