RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 RTL8CO15255 209 aa7.53□□□□□ -1.2
VCAN-205ENST00000503923 APCSP02743 223 aa7.53□□□□□ -1.2
VCAN-205ENST00000503923 AMTP48728 403 aa7.53□□□□□ -1.2
VCAN-205ENST00000503923 POLR2KP53803 58 aaKnown RBP7.53□□□□□ -1.2
VCAN-205ENST00000503923 SUMO2P61956 95 aaKnown RBP7.53□□□□□ -1.2
VCAN-205ENST00000503923 LINC00336Q6ZUF6 198 aa7.53□□□□□ -1.2
VCAN-205ENST00000503923 ORMDL3Q8N138 153 aa7.53□□□□□ -1.2
VCAN-205ENST00000503923 C20orf78Q9BR46 151 aa7.53□□□□□ -1.2
VCAN-205ENST00000503923 TMEM243Q9BU79 118 aa7.53□□□□□ -1.2
VCAN-205ENST00000503923 DNAH17Q9UFH2 4485 aa7.53□□□□□ -1.2
VCAN-205ENST00000503923 TRBV27A0A0K0K1C4 114 aa7.52□□□□□ -1.21
VCAN-205ENST00000503923 IBA57-AS1B1ANH7 110 aa7.52□□□□□ -1.21
VCAN-205ENST00000503923 TNFRSF6BO95407 300 aa7.52□□□□□ -1.21
VCAN-205ENST00000503923 ELOBQ15370 118 aa7.52□□□□□ -1.21
VCAN-205ENST00000503923 COX19Q49B96 90 aa7.52□□□□□ -1.21
VCAN-205ENST00000503923 TMEM136Q6ZRR5 245 aa7.52□□□□□ -1.21
VCAN-205ENST00000503923 NFE4Q86UQ8 179 aa7.52□□□□□ -1.21
VCAN-205ENST00000503923 Q8N3U1 123 aa7.52□□□□□ -1.21
VCAN-205ENST00000503923 DEFB104AQ8WTQ1 72 aa7.52□□□□□ -1.21
VCAN-205ENST00000503923 UBE2L6O14933 153 aa7.51□□□□□ -1.21
VCAN-205ENST00000503923 NPYP01303 97 aa7.51□□□□□ -1.21
VCAN-205ENST00000503923 HLA-DQA1P01909 254 aa7.51□□□□□ -1.21
VCAN-205ENST00000503923 RPL32P62910 135 aaKnown RBP7.51□□□□□ -1.21
VCAN-205ENST00000503923 GAGE6Q13070 117 aa7.51□□□□□ -1.21
VCAN-205ENST00000503923 LAGE3Q14657 143 aa7.51□□□□□ -1.21
VCAN-205ENST00000503923 MPV17L2Q567V2 206 aa7.51□□□□□ -1.21
VCAN-205ENST00000503923 ATRAIDQ6UW56 229 aa7.51□□□□□ -1.21
VCAN-205ENST00000503923 PRELID3AQ96N28 172 aa7.51□□□□□ -1.21
VCAN-205ENST00000503923 GNB1LQ9BYB4 327 aa7.51□□□□□ -1.21
VCAN-205ENST00000503923 LAMTOR2Q9Y2Q5 125 aa7.51□□□□□ -1.21
VCAN-205ENST00000503923 TSHBP01222 138 aa7.5□□□□□ -1.21
VCAN-205ENST00000503923 KIR2DL4Q99706 377 aa7.5□□□□□ -1.21
VCAN-205ENST00000503923 TRAV8-3A0A0A6YYJ7 113 aa7.49□□□□□ -1.21
VCAN-205ENST00000503923 TGIF2-C20orf24A0A0A6YYL0 155 aa7.49□□□□□ -1.21
VCAN-205ENST00000503923 PRSS29PA6NIE9 313 aa7.49□□□□□ -1.21
VCAN-205ENST00000503923 H7C423 109 aa7.49□□□□□ -1.21
VCAN-205ENST00000503923 TCAPO15273 167 aa7.49□□□□□ -1.21
VCAN-205ENST00000503923 MT-ND6P03923 174 aa7.49□□□□□ -1.21
VCAN-205ENST00000503923 FCER1GP30273 86 aa7.49□□□□□ -1.21
VCAN-205ENST00000503923 RBX1P62877 108 aa7.49□□□□□ -1.21
VCAN-205ENST00000503923 SMIM2Q9BVW6 85 aa7.49□□□□□ -1.21
VCAN-205ENST00000503923 KLK12Q9UKR0 248 aa7.49□□□□□ -1.21
VCAN-205ENST00000503923 FAT2Q9NYQ8 4349 aa7.49□□□□□ -1.21
VCAN-205ENST00000503923 A0A1B0GUV1 79 aa7.48□□□□□ -1.21
VCAN-205ENST00000503923 PRSS47A8MTI9 375 aa7.48□□□□□ -1.21
VCAN-205ENST00000503923 ANGP03950 147 aaKnown RBP7.48□□□□□ -1.21
VCAN-205ENST00000503923 ESDP10768 282 aa7.48□□□□□ -1.21
VCAN-205ENST00000503923 Q6ZRN7 208 aaPredicted RBP7.48□□□□□ -1.21
VCAN-205ENST00000503923 Q8N976 141 aa7.48□□□□□ -1.21
VCAN-205ENST00000503923 MAP1LC3AQ9H492 121 aa7.48□□□□□ -1.21
VCAN-205ENST00000503923 Q9HAA7 133 aa7.48□□□□□ -1.21
VCAN-205ENST00000503923 SMCO4Q9NRQ5 59 aa7.48□□□□□ -1.21
VCAN-205ENST00000503923 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.47□□□□□ -1.21
VCAN-205ENST00000503923 IGKV2-29A2NJV5 120 aaPredicted RBP7.47□□□□□ -1.21
VCAN-205ENST00000503923 CRPP02741 224 aa7.47□□□□□ -1.21
VCAN-205ENST00000503923 Q0VG73 95 aa7.47□□□□□ -1.21
VCAN-205ENST00000503923 AMMECR1LQ6DCA0 310 aa7.47□□□□□ -1.21
VCAN-205ENST00000503923 UBE2WQ96B02 151 aa7.47□□□□□ -1.21
VCAN-205ENST00000503923 TM2D2Q9BX73 214 aa7.47□□□□□ -1.21
VCAN-205ENST00000503923 MRPL18Q9H0U6 180 aaKnown RBP7.47□□□□□ -1.21
VCAN-205ENST00000503923 FGF6P10767 208 aa7.46□□□□□ -1.22
VCAN-205ENST00000503923 ZNF25P17030 456 aaPredicted RBP7.46□□□□□ -1.22
VCAN-205ENST00000503923 TNP2Q05952 138 aa7.46□□□□□ -1.22
VCAN-205ENST00000503923 FABP9Q0Z7S8 132 aa7.46□□□□□ -1.22
VCAN-205ENST00000503923 KIAA1644Q3SXP7 199 aa7.46□□□□□ -1.22
VCAN-205ENST00000503923 C20orf203Q8NBC4 194 aa7.46□□□□□ -1.22
VCAN-205ENST00000503923 RMI2Q96E14 147 aa7.46□□□□□ -1.22
VCAN-205ENST00000503923 YPEL4Q96NS1 127 aa7.46□□□□□ -1.22
VCAN-205ENST00000503923 IGLV4-60A0A075B6I1 120 aa7.45□□□□□ -1.22
VCAN-205ENST00000503923 LOC389332A0A1B0GUA5 103 aa7.45□□□□□ -1.22
VCAN-205ENST00000503923 PSCAO43653 123 aa7.45□□□□□ -1.22
VCAN-205ENST00000503923 RAB5AP20339 215 aa7.45□□□□□ -1.22
VCAN-205ENST00000503923 SMAGPQ0VAQ4 97 aa7.45□□□□□ -1.22
VCAN-205ENST00000503923 RNASEKQ6P5S7 137 aaKnown RBP7.45□□□□□ -1.22
VCAN-205ENST00000503923 ENHOQ6UWT2 76 aa7.45□□□□□ -1.22
VCAN-205ENST00000503923 CBLN2Q8IUK8 224 aa7.45□□□□□ -1.22
VCAN-205ENST00000503923 LINC00269Q8N2A0 174 aa7.45□□□□□ -1.22
VCAN-205ENST00000503923 Q8N8P6 123 aa7.45□□□□□ -1.22
VCAN-205ENST00000503923 TMEM18Q96B42 140 aa7.45□□□□□ -1.22
VCAN-205ENST00000503923 PRR34Q9NV39 138 aa7.45□□□□□ -1.22
VCAN-205ENST00000503923 TRAPPC1Q9Y5R8 145 aa7.45□□□□□ -1.22
VCAN-205ENST00000503923 COX11Q9Y6N1 276 aa7.45□□□□□ -1.22
VCAN-205ENST00000503923 REG3AQ06141 175 aa7.44□□□□□ -1.22
VCAN-205ENST00000503923 MIAQ16674 131 aa7.44□□□□□ -1.22
VCAN-205ENST00000503923 MRPL52Q86TS9 123 aaKnown RBP7.44□□□□□ -1.22
VCAN-205ENST00000503923 TMEM101Q96IK0 257 aa7.44□□□□□ -1.22
VCAN-205ENST00000503923 ALKBH7Q9BT30 221 aaPredicted RBP7.44□□□□□ -1.22
VCAN-205ENST00000503923 NXT2Q9NPJ8 142 aaKnown RBP7.44□□□□□ -1.22
VCAN-205ENST00000503923 EPPK1P58107 5090 aaKnown RBP7.44□□□□□ -1.22
VCAN-205ENST00000503923 IGKV2D-24A0A075B6R9 120 aa7.43□□□□□ -1.22
VCAN-205ENST00000503923 CLPSL2Q6UWE3 100 aa7.43□□□□□ -1.22
VCAN-205ENST00000503923 OR5A1Q8NGJ0 315 aa7.43□□□□□ -1.22
VCAN-205ENST00000503923 C1orf43Q9BWL3 253 aa7.43□□□□□ -1.22
VCAN-205ENST00000503923 A0A1B0GVY2 172 aa7.42□□□□□ -1.22
VCAN-205ENST00000503923 K7EMI3 77 aa7.42□□□□□ -1.22
VCAN-205ENST00000503923 EREGO14944 169 aa7.42□□□□□ -1.22
VCAN-205ENST00000503923 IFI27P40305 119 aaPredicted RBP7.42□□□□□ -1.22
VCAN-205ENST00000503923 DGAT2L7PQ6IED9 249 aa7.42□□□□□ -1.22
VCAN-205ENST00000503923 UBE2D4Q9Y2X8 147 aa7.42□□□□□ -1.22
VCAN-205ENST00000503923 CSDC2Q9Y534 153 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms