RNA–Protein interactions for RNA: ENST00000503000.1

ZFYVE28-202, Transcript of zinc finger FYVE-type containing 28, humanhuman

TSL 1 (best) BASIC

Gene ZFYVE28, Length 1,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28-202ENST00000503000 NOP10Q9NPE3 64 aaKnown RBP16.63■□□□□ 0.25
ZFYVE28-202ENST00000503000 Q9UF83 564 aa16.63■□□□□ 0.25
ZFYVE28-202ENST00000503000 C2CD3Q4AC94 2353 aa16.62■□□□□ 0.25
ZFYVE28-202ENST00000503000 TRBV10-1A0A0K0K1A3 114 aa16.62■□□□□ 0.25
ZFYVE28-202ENST00000503000 A6NDN8 102 aa16.62■□□□□ 0.25
ZFYVE28-202ENST00000503000 CIDEAO60543 219 aa16.62■□□□□ 0.25
ZFYVE28-202ENST00000503000 CITED1Q99966 193 aa16.62■□□□□ 0.25
ZFYVE28-202ENST00000503000 OVOL2Q9BRP0 275 aa16.62■□□□□ 0.25
ZFYVE28-202ENST00000503000 CHAC1Q9BUX1 264 aa16.62■□□□□ 0.25
ZFYVE28-202ENST00000503000 VCX2Q9H322 139 aa16.62■□□□□ 0.25
ZFYVE28-202ENST00000503000 IGLV4-3A0A075B6K6 122 aa16.61■□□□□ 0.25
ZFYVE28-202ENST00000503000 PLAC8L1A1L4L8 177 aa16.61■□□□□ 0.25
ZFYVE28-202ENST00000503000 TAX1BP3O14907 124 aa16.61■□□□□ 0.25
ZFYVE28-202ENST00000503000 COTL1Q14019 142 aa16.61■□□□□ 0.25
ZFYVE28-202ENST00000503000 NFE4Q86UQ8 179 aa16.61■□□□□ 0.25
ZFYVE28-202ENST00000503000 ZNF479Q96JC4 524 aa16.61■□□□□ 0.25
ZFYVE28-202ENST00000503000 MYMXA0A1B0GTQ4 84 aa16.6■□□□□ 0.25
ZFYVE28-202ENST00000503000 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.6■□□□□ 0.25
ZFYVE28-202ENST00000503000 PRADC1Q9BSG0 188 aa16.6■□□□□ 0.25
ZFYVE28-202ENST00000503000 CHCHD7Q9BUK0 85 aa16.6■□□□□ 0.25
ZFYVE28-202ENST00000503000 HIVEP1P15822 2718 aa16.59■□□□□ 0.25
ZFYVE28-202ENST00000503000 OPRPNQ99935 248 aaPredicted RBP16.59■□□□□ 0.25
ZFYVE28-202ENST00000503000 SPANXA1Q9NS26 97 aa16.59■□□□□ 0.25
ZFYVE28-202ENST00000503000 TRBV7-3A0A075B6L6 115 aa16.59■□□□□ 0.25
ZFYVE28-202ENST00000503000 TAL2Q16559 108 aa16.59■□□□□ 0.25
ZFYVE28-202ENST00000503000 K7EQD1 137 aa16.58■□□□□ 0.24
ZFYVE28-202ENST00000503000 NIPBLQ6KC79 2804 aaeCLIP16.57■□□□□ 0.24
ZFYVE28-202ENST00000503000 EMP1P54849 157 aa16.57■□□□□ 0.24
ZFYVE28-202ENST00000503000 RPL36AP83881 106 aaKnown RBP16.57■□□□□ 0.24
ZFYVE28-202ENST00000503000 ZNRF2Q8NHG8 242 aa16.57■□□□□ 0.24
ZFYVE28-202ENST00000503000 RPL36ALQ969Q0 106 aaKnown RBP16.57■□□□□ 0.24
ZFYVE28-202ENST00000503000 JMJD1CQ15652 2540 aa16.57■□□□□ 0.24
ZFYVE28-202ENST00000503000 AMELXQ99217 191 aa16.56■□□□□ 0.24
ZFYVE28-202ENST00000503000 TMEM170BQ5T4T1 132 aa16.56■□□□□ 0.24
ZFYVE28-202ENST00000503000 Q6ZVH6 145 aa16.56■□□□□ 0.24
ZFYVE28-202ENST00000503000 PHLDA1Q8WV24 401 aaPredicted RBP16.56■□□□□ 0.24
ZFYVE28-202ENST00000503000 TRGV2A0A075B6R0 118 aa16.54■□□□□ 0.24
ZFYVE28-202ENST00000503000 UBE2D4Q9Y2X8 147 aa16.54■□□□□ 0.24
ZFYVE28-202ENST00000503000 IGHV3-38A0A0C4DH36 116 aa16.54■□□□□ 0.24
ZFYVE28-202ENST00000503000 H3BRM9 83 aa16.54■□□□□ 0.24
ZFYVE28-202ENST00000503000 DAZ4Q86SG3 579 aaKnown RBP16.54■□□□□ 0.24
ZFYVE28-202ENST00000503000 DAZ3Q9NR90 486 aaKnown RBP16.54■□□□□ 0.24
ZFYVE28-202ENST00000503000 GAGE12BA1L429 117 aa16.53■□□□□ 0.24
ZFYVE28-202ENST00000503000 GAGE7O76087 117 aa16.53■□□□□ 0.24
ZFYVE28-202ENST00000503000 GAGE12FP0CL80 117 aa16.53■□□□□ 0.24
ZFYVE28-202ENST00000503000 GAGE12GP0CL81 117 aa16.53■□□□□ 0.24
ZFYVE28-202ENST00000503000 GAGE12IP0CL82 117 aa16.53■□□□□ 0.24
ZFYVE28-202ENST00000503000 TM2D2Q9BX73 214 aa16.53■□□□□ 0.24
ZFYVE28-202ENST00000503000 GCSHP23434 173 aa16.52■□□□□ 0.24
ZFYVE28-202ENST00000503000 CEND1Q8N111 149 aa16.52■□□□□ 0.24
ZFYVE28-202ENST00000503000 SLC25A29Q8N8R3 303 aa16.52■□□□□ 0.24
ZFYVE28-202ENST00000503000 FAM104AQ969W3 186 aa16.52■□□□□ 0.24
ZFYVE28-202ENST00000503000 ZNF815PA8K554 130 aa16.52■□□□□ 0.23
ZFYVE28-202ENST00000503000 TIMM21Q9BVV7 248 aa16.52■□□□□ 0.23
ZFYVE28-202ENST00000503000 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.5■□□□□ 0.23
ZFYVE28-202ENST00000503000 IGKV2-29A2NJV5 120 aaPredicted RBP16.5■□□□□ 0.23
ZFYVE28-202ENST00000503000 UBE2D3P61077 147 aa16.5■□□□□ 0.23
ZFYVE28-202ENST00000503000 UBE2D2P62837 147 aa16.5■□□□□ 0.23
ZFYVE28-202ENST00000503000 SPATA3Q8NHX4 192 aa16.5■□□□□ 0.23
ZFYVE28-202ENST00000503000 TRBV6-4A0A1B0GX49 114 aa16.5■□□□□ 0.23
ZFYVE28-202ENST00000503000 SMIM9A6NGZ8 99 aa16.5■□□□□ 0.23
ZFYVE28-202ENST00000503000 A0A0J9YXV3 536 aa16.49■□□□□ 0.23
ZFYVE28-202ENST00000503000 TMEM223A0PJW6 202 aa16.49■□□□□ 0.23
ZFYVE28-202ENST00000503000 MRPS36P82909 103 aaKnown RBP16.49■□□□□ 0.23
ZFYVE28-202ENST00000503000 ZNF22P17026 224 aaPredicted RBP16.48■□□□□ 0.23
ZFYVE28-202ENST00000503000 UBE2V1Q13404 147 aa16.48■□□□□ 0.23
ZFYVE28-202ENST00000503000 CEMP1Q6PRD7 247 aaPredicted RBP16.48■□□□□ 0.23
ZFYVE28-202ENST00000503000 WFDC9Q8NEX5 89 aa16.48■□□□□ 0.23
ZFYVE28-202ENST00000503000 HIST1H4GQ99525 98 aa16.48■□□□□ 0.23
ZFYVE28-202ENST00000503000 PTTG1IPP53801 180 aa16.48■□□□□ 0.23
ZFYVE28-202ENST00000503000 FXYD2P54710 66 aa16.48■□□□□ 0.23
ZFYVE28-202ENST00000503000 VAMP3Q15836 100 aa16.48■□□□□ 0.23
ZFYVE28-202ENST00000503000 KIR2DL5BQ8NHK3 375 aa16.48■□□□□ 0.23
ZFYVE28-202ENST00000503000 LEPROTO15243 131 aa16.47■□□□□ 0.23
ZFYVE28-202ENST00000503000 NOTCH3Q9UM47 2321 aa16.47■□□□□ 0.23
ZFYVE28-202ENST00000503000 SMIM13P0DJ93 91 aa16.46■□□□□ 0.23
ZFYVE28-202ENST00000503000 SMAGPQ0VAQ4 97 aa16.46■□□□□ 0.23
ZFYVE28-202ENST00000503000 SCGB1D4Q6XE38 83 aa16.46■□□□□ 0.23
ZFYVE28-202ENST00000503000 TRGV4A0A0C4DH28 118 aa16.46■□□□□ 0.22
ZFYVE28-202ENST00000503000 GAGE12JA6NER3 117 aa16.46■□□□□ 0.22
ZFYVE28-202ENST00000503000 C9orf118A6NHY6 69 aa16.46■□□□□ 0.22
ZFYVE28-202ENST00000503000 GAGE4Q13068 117 aa16.46■□□□□ 0.22
ZFYVE28-202ENST00000503000 GAGE5Q13069 117 aa16.46■□□□□ 0.22
ZFYVE28-202ENST00000503000 GAGE13Q4V321 117 aa16.46■□□□□ 0.22
ZFYVE28-202ENST00000503000 J3QQQ9 107 aa16.45■□□□□ 0.22
ZFYVE28-202ENST00000503000 DGAT2L7PQ6IED9 249 aa16.45■□□□□ 0.22
ZFYVE28-202ENST00000503000 GTSF1LQ9H1H1 148 aa16.45■□□□□ 0.22
ZFYVE28-202ENST00000503000 TINCRA0A1B0GVN0 87 aa16.44■□□□□ 0.22
ZFYVE28-202ENST00000503000 LGALS3P17931 250 aaKnown RBP16.44■□□□□ 0.22
ZFYVE28-202ENST00000503000 Q6ZUT4 128 aa16.44■□□□□ 0.22
ZFYVE28-202ENST00000503000 LINC00612Q8N6U2 182 aa16.44■□□□□ 0.22
ZFYVE28-202ENST00000503000 PLEKHB2Q96CS7 222 aa16.44■□□□□ 0.22
ZFYVE28-202ENST00000503000 CSDC2Q9Y534 153 aaKnown RBP16.44■□□□□ 0.22
ZFYVE28-202ENST00000503000 WIPF1O43516 503 aa16.43■□□□□ 0.22
ZFYVE28-202ENST00000503000 APOC4P55056 127 aa16.43■□□□□ 0.22
ZFYVE28-202ENST00000503000 X6R8D5 127 aa16.43■□□□□ 0.22
ZFYVE28-202ENST00000503000 FHL2Q14192 279 aa16.42■□□□□ 0.22
ZFYVE28-202ENST00000503000 TSPEAR-AS2P59090 65 aa16.42■□□□□ 0.22
ZFYVE28-202ENST00000503000 NTM-AS1Q6ZSK4 140 aa16.42■□□□□ 0.22
ZFYVE28-202ENST00000503000 RNASE13Q5GAN3 156 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms