RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 DEFA6Q01524 100 aa9.47□□□□□ -0.89
SGCA-203ENST00000502555 GYPEP15421 78 aa9.46□□□□□ -0.9
SGCA-203ENST00000502555 HTN3P15516 51 aa9.46□□□□□ -0.9
SGCA-203ENST00000502555 Q6ZTC4 211 aa9.46□□□□□ -0.9
SGCA-203ENST00000502555 PHLDA1Q8WV24 401 aaPredicted RBP9.46□□□□□ -0.9
SGCA-203ENST00000502555 TOMM6Q96B49 74 aa9.46□□□□□ -0.9
SGCA-203ENST00000502555 VSIG2Q96IQ7 327 aa9.46□□□□□ -0.9
SGCA-203ENST00000502555 CYSLTR1Q9Y271 337 aa9.46□□□□□ -0.9
SGCA-203ENST00000502555 TRAV26-1A0A087WT03 109 aa9.45□□□□□ -0.9
SGCA-203ENST00000502555 IGHV3-38A0A0C4DH36 116 aa9.45□□□□□ -0.9
SGCA-203ENST00000502555 H3BNG1 76 aa9.45□□□□□ -0.9
SGCA-203ENST00000502555 ATP5LO75964 103 aa9.45□□□□□ -0.9
SGCA-203ENST00000502555 NANOS2P60321 138 aaKnown RBP9.45□□□□□ -0.9
SGCA-203ENST00000502555 TMEM97Q5BJF2 176 aa9.45□□□□□ -0.9
SGCA-203ENST00000502555 C2orf66Q6UXQ4 117 aa9.45□□□□□ -0.9
SGCA-203ENST00000502555 GTSF1LQ9H1H1 148 aa9.45□□□□□ -0.9
SGCA-203ENST00000502555 SH2D6Q7Z4S9 175 aa9.44□□□□□ -0.9
SGCA-203ENST00000502555 C20orf203Q8NBC4 194 aa9.44□□□□□ -0.9
SGCA-203ENST00000502555 TENM3Q9P273 2699 aa9.43□□□□□ -0.9
SGCA-203ENST00000502555 A0A0J9YY99 117 aa9.43□□□□□ -0.9
SGCA-203ENST00000502555 KRTDAPP60985 99 aa9.43□□□□□ -0.9
SGCA-203ENST00000502555 ATP6V0E2Q8NHE4 81 aa9.43□□□□□ -0.9
SGCA-203ENST00000502555 IFI27L1Q96BM0 104 aa9.43□□□□□ -0.9
SGCA-203ENST00000502555 CHCHD7Q9BUK0 85 aa9.43□□□□□ -0.9
SGCA-203ENST00000502555 MAP1LC3CQ9BXW4 147 aa9.43□□□□□ -0.9
SGCA-203ENST00000502555 DEFB131BA0A096LNP1 70 aa9.42□□□□□ -0.9
SGCA-203ENST00000502555 TRAV10A0A0B4J240 114 aa9.42□□□□□ -0.9
SGCA-203ENST00000502555 C3orf79P0CE67 100 aa9.42□□□□□ -0.9
SGCA-203ENST00000502555 MRPL23Q16540 153 aaKnown RBP9.42□□□□□ -0.9
SGCA-203ENST00000502555 LINC00173Q6ZV60 143 aa9.42□□□□□ -0.9
SGCA-203ENST00000502555 ERASQ7Z444 233 aa9.42□□□□□ -0.9
SGCA-203ENST00000502555 DEFB104AQ8WTQ1 72 aa9.42□□□□□ -0.9
SGCA-203ENST00000502555 SCGB3A1Q96QR1 104 aa9.42□□□□□ -0.9
SGCA-203ENST00000502555 ICOSQ9Y6W8 199 aa9.42□□□□□ -0.9
SGCA-203ENST00000502555 SYS1-DBNDD2H3BUS1 97 aa9.41□□□□□ -0.9
SGCA-203ENST00000502555 SMIM6P0DI80 62 aa9.41□□□□□ -0.9
SGCA-203ENST00000502555 JOSD1Q15040 202 aaPredicted RBP9.41□□□□□ -0.9
SGCA-203ENST00000502555 NTM-AS1Q6ZSK4 140 aa9.41□□□□□ -0.9
SGCA-203ENST00000502555 TIMM17AQ99595 171 aa9.41□□□□□ -0.9
SGCA-203ENST00000502555 TRBV25-1A0A075B6N4 114 aa9.4□□□□□ -0.9
SGCA-203ENST00000502555 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.4□□□□□ -0.9
SGCA-203ENST00000502555 RPL39P62891 51 aaKnown RBP9.4□□□□□ -0.9
SGCA-203ENST00000502555 PET117Q6UWS5 81 aa9.4□□□□□ -0.9
SGCA-203ENST00000502555 SPATA12Q7Z6I5 190 aa9.4□□□□□ -0.9
SGCA-203ENST00000502555 TMEM141Q96I45 108 aa9.4□□□□□ -0.9
SGCA-203ENST00000502555 TMEM243Q9BU79 118 aa9.4□□□□□ -0.9
SGCA-203ENST00000502555 TRBV6-8A0A0A6YYG3 113 aa9.39□□□□□ -0.91
SGCA-203ENST00000502555 C20orf202A1L168 122 aa9.39□□□□□ -0.91
SGCA-203ENST00000502555 IGIPA6NJ69 53 aa9.39□□□□□ -0.91
SGCA-203ENST00000502555 H7C423 109 aa9.39□□□□□ -0.91
SGCA-203ENST00000502555 NPSP0C0P6 89 aa9.39□□□□□ -0.91
SGCA-203ENST00000502555 SMAGPQ0VAQ4 97 aa9.39□□□□□ -0.91
SGCA-203ENST00000502555 PYY3Q5JQD4 70 aa9.39□□□□□ -0.91
SGCA-203ENST00000502555 SPANXA1Q9NS26 97 aa9.39□□□□□ -0.91
SGCA-203ENST00000502555 PYGO1Q9Y3Y4 419 aa9.39□□□□□ -0.91
SGCA-203ENST00000502555 A0A096LPF7 62 aa9.38□□□□□ -0.91
SGCA-203ENST00000502555 TIMM21Q9BVV7 248 aa9.38□□□□□ -0.91
SGCA-203ENST00000502555 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.37□□□□□ -0.91
SGCA-203ENST00000502555 IGKV2-29A2NJV5 120 aaPredicted RBP9.37□□□□□ -0.91
SGCA-203ENST00000502555 TIRAPP58753 221 aa9.37□□□□□ -0.91
SGCA-203ENST00000502555 PAPPA-AS1Q5QFB9 102 aa9.37□□□□□ -0.91
SGCA-203ENST00000502555 Q6ZN92 141 aa9.37□□□□□ -0.91
SGCA-203ENST00000502555 MRPL52Q86TS9 123 aaKnown RBP9.37□□□□□ -0.91
SGCA-203ENST00000502555 SCGB1D1O95968 90 aa9.36□□□□□ -0.91
SGCA-203ENST00000502555 PRSS1P07477 247 aa9.36□□□□□ -0.91
SGCA-203ENST00000502555 LINC01545Q5VT33 79 aa9.36□□□□□ -0.91
SGCA-203ENST00000502555 Q8N976 141 aa9.36□□□□□ -0.91
SGCA-203ENST00000502555 UBE2D4Q9Y2X8 147 aa9.36□□□□□ -0.91
SGCA-203ENST00000502555 TRAV12-1A0A0B4J245 112 aa9.35□□□□□ -0.91
SGCA-203ENST00000502555 UBE2L6O14933 153 aa9.35□□□□□ -0.91
SGCA-203ENST00000502555 LGALS9CQ6DKI2 356 aa9.35□□□□□ -0.91
SGCA-203ENST00000502555 C15orf53Q8NAA6 179 aa9.35□□□□□ -0.91
SGCA-203ENST00000502555 BAALCQ8WXS3 180 aa9.35□□□□□ -0.91
SGCA-203ENST00000502555 CSDC2Q9Y534 153 aaKnown RBP9.35□□□□□ -0.91
SGCA-203ENST00000502555 IGLV4-3A0A075B6K6 122 aa9.34□□□□□ -0.91
SGCA-203ENST00000502555 H0Y8G0 127 aa9.34□□□□□ -0.91
SGCA-203ENST00000502555 FGF6P10767 208 aa9.34□□□□□ -0.91
SGCA-203ENST00000502555 ZNF25P17030 456 aaPredicted RBP9.34□□□□□ -0.91
SGCA-203ENST00000502555 MRPS36P82909 103 aaKnown RBP9.34□□□□□ -0.91
SGCA-203ENST00000502555 CHCHD5Q9BSY4 110 aa9.34□□□□□ -0.91
SGCA-203ENST00000502555 MEGF8Q7Z7M0 2845 aa9.34□□□□□ -0.91
SGCA-203ENST00000502555 ODF1Q14990 250 aa9.33□□□□□ -0.92
SGCA-203ENST00000502555 PMVKQ15126 192 aa9.33□□□□□ -0.92
SGCA-203ENST00000502555 LELP1Q5T871 98 aa9.33□□□□□ -0.92
SGCA-203ENST00000502555 AMMECR1LQ6DCA0 310 aa9.33□□□□□ -0.92
SGCA-203ENST00000502555 STAB2Q8WWQ8 2551 aa9.33□□□□□ -0.92
SGCA-203ENST00000502555 A0A087WX48 190 aa9.32□□□□□ -0.92
SGCA-203ENST00000502555 PKIAP61925 76 aa9.32□□□□□ -0.92
SGCA-203ENST00000502555 DGAT2L7PQ6IED9 249 aa9.32□□□□□ -0.92
SGCA-203ENST00000502555 LINC00518Q8N0U6 118 aa9.32□□□□□ -0.92
SGCA-203ENST00000502555 OR5A1Q8NGJ0 315 aa9.32□□□□□ -0.92
SGCA-203ENST00000502555 PRSS29PA6NIE9 313 aa9.31□□□□□ -0.92
SGCA-203ENST00000502555 GAGE6Q13070 117 aa9.31□□□□□ -0.92
SGCA-203ENST00000502555 LYPD5Q6UWN5 251 aa9.31□□□□□ -0.92
SGCA-203ENST00000502555 TEX43Q6ZNM6 134 aa9.31□□□□□ -0.92
SGCA-203ENST00000502555 Q6ZUT4 128 aa9.31□□□□□ -0.92
SGCA-203ENST00000502555 TMEM101Q96IK0 257 aa9.31□□□□□ -0.92
SGCA-203ENST00000502555 AMELXQ99217 191 aa9.31□□□□□ -0.92
SGCA-203ENST00000502555 C12orf57Q99622 126 aa9.31□□□□□ -0.92
SGCA-203ENST00000502555 VCX2Q9H322 139 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms