RNA–Protein interactions for RNA: ENST00000498751.1

SYNE1-231, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 578 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-231ENST00000498751 CHTOPQ9Y3Y2 248 aaKnown RBP5.48□□□□□ -1.53
SYNE1-231ENST00000498751 FN1P02751 2386 aaKnown RBP5.48□□□□□ -1.53
SYNE1-231ENST00000498751 IGLV4-69A0A075B6H9 119 aa5.47□□□□□ -1.53
SYNE1-231ENST00000498751 TRBV7-3A0A075B6L6 115 aa5.47□□□□□ -1.53
SYNE1-231ENST00000498751 PRSS29PA6NIE9 313 aa5.47□□□□□ -1.53
SYNE1-231ENST00000498751 C11orf86A6NJI1 115 aa5.47□□□□□ -1.53
SYNE1-231ENST00000498751 A8MZ25 164 aa5.47□□□□□ -1.53
SYNE1-231ENST00000498751 E9PLD3 99 aa5.47□□□□□ -1.53
SYNE1-231ENST00000498751 MRPS36P82909 103 aaKnown RBP5.47□□□□□ -1.53
SYNE1-231ENST00000498751 COL5A1-AS1Q5SY13 56 aa5.47□□□□□ -1.53
SYNE1-231ENST00000498751 ZC2HC1BQ5TFG8 222 aa5.47□□□□□ -1.53
SYNE1-231ENST00000498751 Q6ZSN1 163 aa5.47□□□□□ -1.53
SYNE1-231ENST00000498751 FAM19A3Q7Z5A8 133 aa5.47□□□□□ -1.53
SYNE1-231ENST00000498751 GTSF1LQ9H1H1 148 aa5.47□□□□□ -1.53
SYNE1-231ENST00000498751 SPANXA1Q9NS26 97 aa5.47□□□□□ -1.53
SYNE1-231ENST00000498751 MRPL16Q9NX20 251 aaKnown RBP5.47□□□□□ -1.53
SYNE1-231ENST00000498751 ZMAT5Q9UDW3 170 aaKnown RBP5.47□□□□□ -1.53
SYNE1-231ENST00000498751 TNFRSF18Q9Y5U5 241 aa5.47□□□□□ -1.53
SYNE1-231ENST00000498751 NSD1Q96L73 2696 aaPredicted RBP5.47□□□□□ -1.53
SYNE1-231ENST00000498751 H0Y8G0 127 aa5.46□□□□□ -1.54
SYNE1-231ENST00000498751 H7C423 109 aa5.46□□□□□ -1.54
SYNE1-231ENST00000498751 K7EQD1 137 aa5.46□□□□□ -1.54
SYNE1-231ENST00000498751 LINC00694P0DN24 101 aa5.46□□□□□ -1.54
SYNE1-231ENST00000498751 UBE2D3P61077 147 aa5.46□□□□□ -1.54
SYNE1-231ENST00000498751 UBE2D2P62837 147 aa5.46□□□□□ -1.54
SYNE1-231ENST00000498751 TAL2Q16559 108 aa5.46□□□□□ -1.54
SYNE1-231ENST00000498751 DAZ4Q86SG3 579 aaKnown RBP5.46□□□□□ -1.54
SYNE1-231ENST00000498751 STPG4Q8N801 248 aa5.46□□□□□ -1.54
SYNE1-231ENST00000498751 OR4C5Q8NGB2 326 aa5.46□□□□□ -1.54
SYNE1-231ENST00000498751 FAM104AQ969W3 186 aa5.46□□□□□ -1.54
SYNE1-231ENST00000498751 CHCHD7Q9BUK0 85 aa5.46□□□□□ -1.54
SYNE1-231ENST00000498751 WFDC10AQ9H1F0 79 aa5.46□□□□□ -1.54
SYNE1-231ENST00000498751 CST9LQ9H4G1 147 aa5.46□□□□□ -1.54
SYNE1-231ENST00000498751 DAZ3Q9NR90 486 aaKnown RBP5.46□□□□□ -1.54
SYNE1-231ENST00000498751 HECTD1Q9ULT8 2610 aa5.46□□□□□ -1.54
SYNE1-231ENST00000498751 NACAE9PAV3 2078 aa5.46□□□□□ -1.54
SYNE1-231ENST00000498751 IGLV4-3A0A075B6K6 122 aa5.45□□□□□ -1.54
SYNE1-231ENST00000498751 TRGV1A0A0A0MS02 117 aa5.45□□□□□ -1.54
SYNE1-231ENST00000498751 PRM2P04554 102 aa5.45□□□□□ -1.54
SYNE1-231ENST00000498751 HTN1P15515 57 aa5.45□□□□□ -1.54
SYNE1-231ENST00000498751 SEC11AP67812 179 aa5.45□□□□□ -1.54
SYNE1-231ENST00000498751 RPL36AP83881 106 aaKnown RBP5.45□□□□□ -1.54
SYNE1-231ENST00000498751 HSD52Q0P140 79 aa5.45□□□□□ -1.54
SYNE1-231ENST00000498751 COTL1Q14019 142 aa5.45□□□□□ -1.54
SYNE1-231ENST00000498751 BVES-AS1Q5T3Y7 98 aa5.45□□□□□ -1.54
SYNE1-231ENST00000498751 NEGR1Q7Z3B1 354 aa5.45□□□□□ -1.54
SYNE1-231ENST00000498751 RPL36ALQ969Q0 106 aaKnown RBP5.45□□□□□ -1.54
SYNE1-231ENST00000498751 ZNF479Q96JC4 524 aa5.45□□□□□ -1.54
SYNE1-231ENST00000498751 UBE2D4Q9Y2X8 147 aa5.45□□□□□ -1.54
SYNE1-231ENST00000498751 X6R8D5 127 aa5.45□□□□□ -1.54
SYNE1-231ENST00000498751 MTORP42345 2549 aa5.44□□□□□ -1.54
SYNE1-231ENST00000498751 IGKV2D-26A0A0A0MRZ7 120 aa5.44□□□□□ -1.54
SYNE1-231ENST00000498751 LYRM9A8MSI8 78 aa5.44□□□□□ -1.54
SYNE1-231ENST00000498751 APOC4P55056 127 aa5.44□□□□□ -1.54
SYNE1-231ENST00000498751 RPL39P62891 51 aaKnown RBP5.44□□□□□ -1.54
SYNE1-231ENST00000498751 EGFEM1PQ0D2K5 195 aa5.44□□□□□ -1.54
SYNE1-231ENST00000498751 SMAGPQ0VAQ4 97 aa5.44□□□□□ -1.54
SYNE1-231ENST00000498751 TMEM97Q5BJF2 176 aa5.44□□□□□ -1.54
SYNE1-231ENST00000498751 Q6ZTI0 123 aa5.44□□□□□ -1.54
SYNE1-231ENST00000498751 SBSPONQ8IVN8 264 aa5.44□□□□□ -1.54
SYNE1-231ENST00000498751 NOP10Q9NPE3 64 aaKnown RBP5.44□□□□□ -1.54
SYNE1-231ENST00000498751 SORL1Q92673 2214 aa5.44□□□□□ -1.54
SYNE1-231ENST00000498751 TRBV25-1A0A075B6N4 114 aa5.43□□□□□ -1.54
SYNE1-231ENST00000498751 RPL35AP18077 110 aaKnown RBP5.43□□□□□ -1.54
SYNE1-231ENST00000498751 GAGE1Q13065 139 aa5.43□□□□□ -1.54
SYNE1-231ENST00000498751 FHL2Q14192 279 aa5.43□□□□□ -1.54
SYNE1-231ENST00000498751 KRTAP24-1Q3LI83 254 aa5.43□□□□□ -1.54
SYNE1-231ENST00000498751 MPV17L2Q567V2 206 aa5.43□□□□□ -1.54
SYNE1-231ENST00000498751 PCP2Q8IVA1 136 aa5.43□□□□□ -1.54
SYNE1-231ENST00000498751 SLC25A29Q8N8R3 303 aa5.43□□□□□ -1.54
SYNE1-231ENST00000498751 SPATA3Q8NHX4 192 aa5.43□□□□□ -1.54
SYNE1-231ENST00000498751 TM2D2Q9BX73 214 aa5.43□□□□□ -1.54
SYNE1-231ENST00000498751 HIVEP1P15822 2718 aa5.43□□□□□ -1.54
SYNE1-231ENST00000498751 C2CD3Q4AC94 2353 aa5.43□□□□□ -1.54
SYNE1-231ENST00000498751 IGHV3OR16-12A0A075B7B8 117 aa5.42□□□□□ -1.54
SYNE1-231ENST00000498751 IGLV5-45A0A087WSX0 123 aa5.42□□□□□ -1.54
SYNE1-231ENST00000498751 KRTAP9-7A8MTY7 169 aa5.42□□□□□ -1.54
SYNE1-231ENST00000498751 MIFP14174 115 aa5.42□□□□□ -1.54
SYNE1-231ENST00000498751 TIRAPP58753 221 aa5.42□□□□□ -1.54
SYNE1-231ENST00000498751 HERVK_113P61574 105 aa5.42□□□□□ -1.54
SYNE1-231ENST00000498751 OR11H2Q8NH07 326 aa5.42□□□□□ -1.54
SYNE1-231ENST00000498751 ZNRF2Q8NHG8 242 aa5.42□□□□□ -1.54
SYNE1-231ENST00000498751 VCX2Q9H322 139 aa5.42□□□□□ -1.54
SYNE1-231ENST00000498751 Q9UF83 564 aa5.42□□□□□ -1.54
SYNE1-231ENST00000498751 SETXQ7Z333 2677 aaKnown RBP5.41□□□□□ -1.54
SYNE1-231ENST00000498751 NF1P21359 2839 aa5.41□□□□□ -1.54
SYNE1-231ENST00000498751 IGHV3-73A0A0B4J1V6 119 aa5.41□□□□□ -1.54
SYNE1-231ENST00000498751 MYMXA0A1B0GTQ4 84 aa5.41□□□□□ -1.54
SYNE1-231ENST00000498751 TEX48A0A1B0GUV7 120 aa5.41□□□□□ -1.54
SYNE1-231ENST00000498751 A0A1B0GV90 55 aa5.41□□□□□ -1.54
SYNE1-231ENST00000498751 TINCRA0A1B0GVN0 87 aa5.41□□□□□ -1.54
SYNE1-231ENST00000498751 TMEM223A0PJW6 202 aa5.41□□□□□ -1.54
SYNE1-231ENST00000498751 ZNF25P17030 456 aaPredicted RBP5.41□□□□□ -1.54
SYNE1-231ENST00000498751 NMUP48645 174 aa5.41□□□□□ -1.54
SYNE1-231ENST00000498751 NTM-AS1Q6ZSK4 140 aa5.41□□□□□ -1.54
SYNE1-231ENST00000498751 LINC00469Q8N7U9 141 aa5.41□□□□□ -1.54
SYNE1-231ENST00000498751 ORAOV1Q8WV07 137 aa5.41□□□□□ -1.54
SYNE1-231ENST00000498751 TRGV2A0A075B6R0 118 aa5.4□□□□□ -1.54
SYNE1-231ENST00000498751 GAGE12BA1L429 117 aa5.4□□□□□ -1.54
SYNE1-231ENST00000498751 GAGE7O76087 117 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms