RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 BCL2P10415 239 aa7.08□□□□□ -1.28
LSAMP-206ENST00000498645 AMTP48728 403 aa7.08□□□□□ -1.28
LSAMP-206ENST00000498645 COTL1Q14019 142 aa7.08□□□□□ -1.28
LSAMP-206ENST00000498645 TWIST1Q15672 202 aa7.08□□□□□ -1.28
LSAMP-206ENST00000498645 WDR73Q6P4I2 378 aa7.08□□□□□ -1.28
LSAMP-206ENST00000498645 SDIM1Q6ZPB5 146 aa7.08□□□□□ -1.28
LSAMP-206ENST00000498645 SMIM12Q96EX1 92 aa7.08□□□□□ -1.28
LSAMP-206ENST00000498645 NIT2Q9NQR4 276 aa7.08□□□□□ -1.28
LSAMP-206ENST00000498645 AP5S1Q9NUS5 200 aa7.08□□□□□ -1.28
LSAMP-206ENST00000498645 HMCN2Q8NDA2 5059 aa7.08□□□□□ -1.28
LSAMP-206ENST00000498645 IGHV3-64A0A075B6Q5 118 aa7.07□□□□□ -1.28
LSAMP-206ENST00000498645 TRAV26-2A0A0B4J265 109 aa7.07□□□□□ -1.28
LSAMP-206ENST00000498645 A0A1B0GUV1 79 aa7.07□□□□□ -1.28
LSAMP-206ENST00000498645 PGLYRP4Q96LB8 373 aa7.07□□□□□ -1.28
LSAMP-206ENST00000498645 BIN3Q9NQY0 253 aa7.07□□□□□ -1.28
LSAMP-206ENST00000498645 FAT3Q8TDW7 4589 aa7.07□□□□□ -1.28
LSAMP-206ENST00000498645 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.06□□□□□ -1.28
LSAMP-206ENST00000498645 CHTF8P0CG12 524 aa7.06□□□□□ -1.28
LSAMP-206ENST00000498645 CTRLP40313 264 aa7.06□□□□□ -1.28
LSAMP-206ENST00000498645 CNBPP62633 177 aaKnown RBP7.06□□□□□ -1.28
LSAMP-206ENST00000498645 NUDT10Q8NFP7 164 aa7.06□□□□□ -1.28
LSAMP-206ENST00000498645 NUDT11Q96G61 164 aa7.06□□□□□ -1.28
LSAMP-206ENST00000498645 RNASE7Q9H1E1 156 aaKnown RBP7.06□□□□□ -1.28
LSAMP-206ENST00000498645 RPP21Q9H633 154 aaKnown RBP7.06□□□□□ -1.28
LSAMP-206ENST00000498645 PLA2G2DQ9UNK4 145 aa7.06□□□□□ -1.28
LSAMP-206ENST00000498645 GAGE12HA6NDE8 117 aa7.05□□□□□ -1.28
LSAMP-206ENST00000498645 AMMECR1LQ6DCA0 310 aa7.05□□□□□ -1.28
LSAMP-206ENST00000498645 C9orf62Q8N4C0 152 aa7.05□□□□□ -1.28
LSAMP-206ENST00000498645 SLPIP03973 132 aa7.04□□□□□ -1.28
LSAMP-206ENST00000498645 HIGD2BQ4VC39 106 aa7.04□□□□□ -1.28
LSAMP-206ENST00000498645 RNASEKQ6P5S7 137 aaKnown RBP7.04□□□□□ -1.28
LSAMP-206ENST00000498645 GATD1Q8NB37 220 aa7.04□□□□□ -1.28
LSAMP-206ENST00000498645 RPL39LQ96EH5 51 aaKnown RBP7.04□□□□□ -1.28
LSAMP-206ENST00000498645 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.03□□□□□ -1.28
LSAMP-206ENST00000498645 A0A087WYN8 130 aa7.03□□□□□ -1.28
LSAMP-206ENST00000498645 IGKV2-29A2NJV5 120 aaPredicted RBP7.03□□□□□ -1.28
LSAMP-206ENST00000498645 K7EN84 100 aa7.03□□□□□ -1.28
LSAMP-206ENST00000498645 FOXA3P55318 350 aaPredicted RBP7.03□□□□□ -1.28
LSAMP-206ENST00000498645 Q6ZNX1 250 aa7.03□□□□□ -1.28
LSAMP-206ENST00000498645 SMIM15Q7Z3B0 74 aa7.03□□□□□ -1.28
LSAMP-206ENST00000498645 C15orf56Q8N910 161 aa7.03□□□□□ -1.28
LSAMP-206ENST00000498645 OCC1Q8TAD7 63 aa7.03□□□□□ -1.28
LSAMP-206ENST00000498645 APCSP02743 223 aa7.02□□□□□ -1.29
LSAMP-206ENST00000498645 CEBPGP53567 150 aa7.02□□□□□ -1.29
LSAMP-206ENST00000498645 CIRBPQ14011 172 aaKnown RBP7.02□□□□□ -1.29
LSAMP-206ENST00000498645 CFAP161Q6P656 301 aa7.02□□□□□ -1.29
LSAMP-206ENST00000498645 SLC51BQ86UW2 128 aa7.02□□□□□ -1.29
LSAMP-206ENST00000498645 SPACA4Q8TDM5 124 aa7.02□□□□□ -1.29
LSAMP-206ENST00000498645 GTSF1Q8WW33 167 aa7.02□□□□□ -1.29
LSAMP-206ENST00000498645 CNFNQ9BYD5 112 aa7.02□□□□□ -1.29
LSAMP-206ENST00000498645 UBR4Q5T4S7 5183 aa7.01□□□□□ -1.29
LSAMP-206ENST00000498645 IGKV2-24A0A0C4DH68 120 aa7.01□□□□□ -1.29
LSAMP-206ENST00000498645 TAGLN2P37802 199 aaKnown RBP7.01□□□□□ -1.29
LSAMP-206ENST00000498645 COX6A2Q02221 97 aa7.01□□□□□ -1.29
LSAMP-206ENST00000498645 TCTE3Q8IZS6 198 aa7.01□□□□□ -1.29
LSAMP-206ENST00000498645 CHCHD10Q8WYQ3 142 aaPredicted RBP7.01□□□□□ -1.29
LSAMP-206ENST00000498645 RNF185Q96GF1 192 aa7.01□□□□□ -1.29
LSAMP-206ENST00000498645 SDHAF1A6NFY7 115 aa7□□□□□ -1.29
LSAMP-206ENST00000498645 GATCO43716 136 aaKnown RBP7□□□□□ -1.29
LSAMP-206ENST00000498645 FGF6P10767 208 aa7□□□□□ -1.29
LSAMP-206ENST00000498645 RPS10P46783 165 aaKnown RBP7□□□□□ -1.29
LSAMP-206ENST00000498645 MAJINQ3KP22 176 aa7□□□□□ -1.29
LSAMP-206ENST00000498645 PHOX2AO14813 284 aa6.99□□□□□ -1.29
LSAMP-206ENST00000498645 NCR2O95944 276 aa6.99□□□□□ -1.29
LSAMP-206ENST00000498645 PMCHP20382 165 aa6.99□□□□□ -1.29
LSAMP-206ENST00000498645 Q6ZRU5 148 aa6.99□□□□□ -1.29
LSAMP-206ENST00000498645 PRSS3P2Q8NHM4 247 aa6.99□□□□□ -1.29
LSAMP-206ENST00000498645 C7orf33Q8WU49 177 aa6.99□□□□□ -1.29
LSAMP-206ENST00000498645 A8MWL6 223 aa6.98□□□□□ -1.29
LSAMP-206ENST00000498645 NDUFS6O75380 124 aaKnown RBP6.98□□□□□ -1.29
LSAMP-206ENST00000498645 XCL1P47992 114 aa6.98□□□□□ -1.29
LSAMP-206ENST00000498645 TEX261Q6UWH6 196 aa6.98□□□□□ -1.29
LSAMP-206ENST00000498645 ALKAL2Q6UX46 152 aa6.98□□□□□ -1.29
LSAMP-206ENST00000498645 LYPD6BQ8NI32 183 aa6.98□□□□□ -1.29
LSAMP-206ENST00000498645 BORCS7Q96B45 105 aa6.98□□□□□ -1.29
LSAMP-206ENST00000498645 TMEM101Q96IK0 257 aa6.98□□□□□ -1.29
LSAMP-206ENST00000498645 BTF3L4Q96K17 158 aa6.98□□□□□ -1.29
LSAMP-206ENST00000498645 PLAC8Q9NZF1 115 aa6.98□□□□□ -1.29
LSAMP-206ENST00000498645 GVQW2A0A096LPI5 108 aaPredicted RBP6.97□□□□□ -1.29
LSAMP-206ENST00000498645 TMEM250H0YL14 139 aa6.97□□□□□ -1.29
LSAMP-206ENST00000498645 H7C423 109 aa6.97□□□□□ -1.29
LSAMP-206ENST00000498645 I3L3M4 83 aa6.97□□□□□ -1.29
LSAMP-206ENST00000498645 CCL25O15444 150 aa6.97□□□□□ -1.29
LSAMP-206ENST00000498645 GAS8-AS1O95177 125 aa6.97□□□□□ -1.29
LSAMP-206ENST00000498645 MT1HL1P0DM35 61 aa6.97□□□□□ -1.29
LSAMP-206ENST00000498645 FOXI1Q12951 378 aa6.97□□□□□ -1.29
LSAMP-206ENST00000498645 STPG4Q8N801 248 aa6.97□□□□□ -1.29
LSAMP-206ENST00000498645 TMEM242Q9NWH2 141 aa6.97□□□□□ -1.29
LSAMP-206ENST00000498645 A0A096LNI7 61 aa6.96□□□□□ -1.3
LSAMP-206ENST00000498645 ZNF25P17030 456 aaPredicted RBP6.96□□□□□ -1.3
LSAMP-206ENST00000498645 BLOC1S1P78537 153 aa6.96□□□□□ -1.3
LSAMP-206ENST00000498645 FAM231DQ6ZW35 169 aa6.96□□□□□ -1.3
LSAMP-206ENST00000498645 OR5A1Q8NGJ0 315 aa6.96□□□□□ -1.3
LSAMP-206ENST00000498645 LINC00526Q96FQ7 95 aa6.96□□□□□ -1.3
LSAMP-206ENST00000498645 ST20Q9HBF5 79 aa6.96□□□□□ -1.3
LSAMP-206ENST00000498645 hCG_2014768A0A024R1R8 64 aa6.95□□□□□ -1.3
LSAMP-206ENST00000498645 LINC00959A0A1B0GUT2 108 aa6.95□□□□□ -1.3
LSAMP-206ENST00000498645 FAM231BA6NCW3 169 aa6.95□□□□□ -1.3
LSAMP-206ENST00000498645 TSHBP01222 138 aa6.95□□□□□ -1.3
LSAMP-206ENST00000498645 AKAP14Q86UN6 197 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms