RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 TMEM223A0PJW6 202 aa12.1□□□□□ -0.47
COL6A1-206ENST00000498614 MDFICQ9P1T7 246 aa12.1□□□□□ -0.47
COL6A1-206ENST00000498614 TRAV2A0A0B4J234 112 aa12.09□□□□□ -0.47
COL6A1-206ENST00000498614 H7C2G1 150 aa12.09□□□□□ -0.47
COL6A1-206ENST00000498614 LEPROTO15243 131 aa12.09□□□□□ -0.47
COL6A1-206ENST00000498614 IGHV3-33P01772 117 aa12.09□□□□□ -0.47
COL6A1-206ENST00000498614 TMEM263Q8WUH6 116 aaKnown RBP12.09□□□□□ -0.47
COL6A1-206ENST00000498614 IGHV3-16A0A0C4DH30 117 aa12.08□□□□□ -0.47
COL6A1-206ENST00000498614 C9JAW5 83 aa12.08□□□□□ -0.47
COL6A1-206ENST00000498614 M0QY20 66 aa12.08□□□□□ -0.47
COL6A1-206ENST00000498614 P0DMU3 169 aa12.08□□□□□ -0.47
COL6A1-206ENST00000498614 FAM231AP0DMU4 169 aa12.08□□□□□ -0.47
COL6A1-206ENST00000498614 FAM231CP0DMU5 169 aa12.08□□□□□ -0.47
COL6A1-206ENST00000498614 SNRPD3P62318 126 aaKnown RBP12.08□□□□□ -0.47
COL6A1-206ENST00000498614 ZNF56Q15929 161 aa12.08□□□□□ -0.47
COL6A1-206ENST00000498614 A0A0J9YX75 114 aa12.08□□□□□ -0.48
COL6A1-206ENST00000498614 SLC25A20O43772 301 aa12.08□□□□□ -0.48
COL6A1-206ENST00000498614 C9orf85Q96MD7 179 aa12.08□□□□□ -0.48
COL6A1-206ENST00000498614 VCX2Q9H322 139 aa12.08□□□□□ -0.48
COL6A1-206ENST00000498614 J3QLI3 93 aa12.07□□□□□ -0.48
COL6A1-206ENST00000498614 K7EQG2 157 aa12.07□□□□□ -0.48
COL6A1-206ENST00000498614 MUSTN1Q8IVN3 82 aa12.07□□□□□ -0.48
COL6A1-206ENST00000498614 VPREB3Q9UKI3 123 aa12.07□□□□□ -0.48
COL6A1-206ENST00000498614 TMEM89A2RUT3 159 aa12.07□□□□□ -0.48
COL6A1-206ENST00000498614 ZNF22P17026 224 aaPredicted RBP12.07□□□□□ -0.48
COL6A1-206ENST00000498614 SPINK13Q1W4C9 94 aa12.07□□□□□ -0.48
COL6A1-206ENST00000498614 NSUN5P1Q3KNT7 163 aa12.07□□□□□ -0.48
COL6A1-206ENST00000498614 SMR3AQ99954 134 aa12.06□□□□□ -0.48
COL6A1-206ENST00000498614 ERG28Q9UKR5 140 aa12.06□□□□□ -0.48
COL6A1-206ENST00000498614 A0A0J9YXV3 536 aa12.06□□□□□ -0.48
COL6A1-206ENST00000498614 RHODO00212 210 aa12.06□□□□□ -0.48
COL6A1-206ENST00000498614 ELANEP08246 267 aa12.06□□□□□ -0.48
COL6A1-206ENST00000498614 RHOHQ15669 191 aa12.06□□□□□ -0.48
COL6A1-206ENST00000498614 ZNF702PQ9H963 129 aa12.06□□□□□ -0.48
COL6A1-206ENST00000498614 HOXD3P31249 432 aaPredicted RBP12.05□□□□□ -0.48
COL6A1-206ENST00000498614 Q8N1Y9 231 aa12.05□□□□□ -0.48
COL6A1-206ENST00000498614 RNF183Q96D59 192 aa12.05□□□□□ -0.48
COL6A1-206ENST00000498614 A0A0B4J2C4 111 aa12.05□□□□□ -0.48
COL6A1-206ENST00000498614 SORL1Q92673 2214 aa12.04□□□□□ -0.48
COL6A1-206ENST00000498614 Q6YL49 198 aa12.04□□□□□ -0.48
COL6A1-206ENST00000498614 C20orf203Q8NBC4 194 aa12.04□□□□□ -0.48
COL6A1-206ENST00000498614 ANK3Q12955 4377 aaKnown RBP12.04□□□□□ -0.48
COL6A1-206ENST00000498614 ODF3Q96PU9 254 aa12.04□□□□□ -0.48
COL6A1-206ENST00000498614 IGLV4-3A0A075B6K6 122 aa12.03□□□□□ -0.48
COL6A1-206ENST00000498614 MTORP42345 2549 aa12.03□□□□□ -0.48
COL6A1-206ENST00000498614 TMEM262E9PQX1 116 aa12.03□□□□□ -0.48
COL6A1-206ENST00000498614 M0R2P5 195 aa12.03□□□□□ -0.48
COL6A1-206ENST00000498614 DEFB136Q30KP8 78 aa12.03□□□□□ -0.48
COL6A1-206ENST00000498614 C18orf65Q6ZTR6 163 aa12.03□□□□□ -0.48
COL6A1-206ENST00000498614 IGHV1OR15-1A0A075B7D0 117 aa12.02□□□□□ -0.49
COL6A1-206ENST00000498614 ADARB2-AS1A8MUL3 147 aa12.02□□□□□ -0.49
COL6A1-206ENST00000498614 FSHBP01225 129 aa12.02□□□□□ -0.49
COL6A1-206ENST00000498614 Q1RN00 199 aa12.02□□□□□ -0.49
COL6A1-206ENST00000498614 A0A0J9YXY3 114 aa12.01□□□□□ -0.49
COL6A1-206ENST00000498614 M0QXV9 152 aa12.01□□□□□ -0.49
COL6A1-206ENST00000498614 UBE2E2Q96LR5 201 aa12.01□□□□□ -0.49
COL6A1-206ENST00000498614 I3L3M4 83 aa12.01□□□□□ -0.49
COL6A1-206ENST00000498614 KRTAP1-1Q07627 177 aa12.01□□□□□ -0.49
COL6A1-206ENST00000498614 CITED1Q99966 193 aa12.01□□□□□ -0.49
COL6A1-206ENST00000498614 HIVEP1P15822 2718 aa12.01□□□□□ -0.49
COL6A1-206ENST00000498614 SLURP1P55000 103 aa12□□□□□ -0.49
COL6A1-206ENST00000498614 ZFAND6Q6FIF0 208 aa12□□□□□ -0.49
COL6A1-206ENST00000498614 NTN5Q8WTR8 489 aaPredicted RBP12□□□□□ -0.49
COL6A1-206ENST00000498614 TRAV16A0A0A6YYK6 109 aaPredicted RBP12□□□□□ -0.49
COL6A1-206ENST00000498614 CYSRT1A8MQ03 144 aa12□□□□□ -0.49
COL6A1-206ENST00000498614 ATXN8Q156A1 80 aa11.99□□□□□ -0.49
COL6A1-206ENST00000498614 LINC01620Q4KN68 170 aa11.99□□□□□ -0.49
COL6A1-206ENST00000498614 ANAPC13Q9BS18 74 aa11.99□□□□□ -0.49
COL6A1-206ENST00000498614 SPXQ9BT56 116 aa11.99□□□□□ -0.49
COL6A1-206ENST00000498614 KNCNA6PVL3 124 aa11.99□□□□□ -0.49
COL6A1-206ENST00000498614 IGHV3-30-3P0DP02 117 aa11.99□□□□□ -0.49
COL6A1-206ENST00000498614 TEX29Q8N6K0 151 aa11.99□□□□□ -0.49
COL6A1-206ENST00000498614 FAM104AQ969W3 186 aa11.98□□□□□ -0.49
COL6A1-206ENST00000498614 LITAFQ99732 161 aa11.98□□□□□ -0.49
COL6A1-206ENST00000498614 TRIAP1O43715 76 aa11.98□□□□□ -0.49
COL6A1-206ENST00000498614 HTN1P15515 57 aa11.98□□□□□ -0.49
COL6A1-206ENST00000498614 DUX3Q96PT4 197 aa11.98□□□□□ -0.49
COL6A1-206ENST00000498614 YAE1D1Q9NRH1 226 aa11.98□□□□□ -0.49
COL6A1-206ENST00000498614 NF1P21359 2839 aa11.98□□□□□ -0.49
COL6A1-206ENST00000498614 TRAV8-3A0A0A6YYJ7 113 aa11.97□□□□□ -0.49
COL6A1-206ENST00000498614 RBMY1A1P0DJD3 496 aaKnown RBP11.97□□□□□ -0.49
COL6A1-206ENST00000498614 RBMY1CP0DJD4 496 aa11.97□□□□□ -0.49
COL6A1-206ENST00000498614 RBMY1FQ15415 496 aaKnown RBP11.97□□□□□ -0.49
COL6A1-206ENST00000498614 HIST2H2BDQ6DRA6 164 aa11.97□□□□□ -0.49
COL6A1-206ENST00000498614 CEMP1Q6PRD7 247 aaPredicted RBP11.97□□□□□ -0.49
COL6A1-206ENST00000498614 TIMM21Q9BVV7 248 aa11.97□□□□□ -0.49
COL6A1-206ENST00000498614 IGHV3-73A0A0B4J1V6 119 aa11.96□□□□□ -0.49
COL6A1-206ENST00000498614 TEX49A0A1B0GTD5 131 aa11.96□□□□□ -0.49
COL6A1-206ENST00000498614 CRLF1O75462 422 aa11.96□□□□□ -0.49
COL6A1-206ENST00000498614 CD28P10747 220 aa11.96□□□□□ -0.49
COL6A1-206ENST00000498614 RNASE13Q5GAN3 156 aaKnown RBP11.96□□□□□ -0.49
COL6A1-206ENST00000498614 PRSS2P07478 247 aa11.96□□□□□ -0.5
COL6A1-206ENST00000498614 DEFB131AP59861 70 aa11.96□□□□□ -0.5
COL6A1-206ENST00000498614 ADAMTSL4-AS1Q5T5F5 129 aa11.96□□□□□ -0.5
COL6A1-206ENST00000498614 RNF152Q8N8N0 203 aa11.96□□□□□ -0.5
COL6A1-206ENST00000498614 HIVEP2P31629 2446 aa11.95□□□□□ -0.5
COL6A1-206ENST00000498614 TRAV4A0A0B4J268 109 aa11.95□□□□□ -0.5
COL6A1-206ENST00000498614 TRBV30A0A0K0K1B3 111 aa11.95□□□□□ -0.5
COL6A1-206ENST00000498614 PROK1P58294 105 aa11.95□□□□□ -0.5
COL6A1-206ENST00000498614 KHDC1LQ5JSQ8 128 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms