RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 PGLYRP4Q96LB8 373 aa10.54□□□□□ -0.72
NR1H3-227ENST00000498548 HLA-DQA1P01909 254 aa10.53□□□□□ -0.72
NR1H3-227ENST00000498548 CNFNQ9BYD5 112 aa10.53□□□□□ -0.72
NR1H3-227ENST00000498548 FAM229AH3BQW9 127 aa10.52□□□□□ -0.73
NR1H3-227ENST00000498548 MIAQ16674 131 aa10.52□□□□□ -0.73
NR1H3-227ENST00000498548 FAM231DQ6ZW35 169 aa10.52□□□□□ -0.73
NR1H3-227ENST00000498548 C20orf203Q8NBC4 194 aa10.52□□□□□ -0.73
NR1H3-227ENST00000498548 RPL39LQ96EH5 51 aaKnown RBP10.52□□□□□ -0.73
NR1H3-227ENST00000498548 TMEM243Q9BU79 118 aa10.52□□□□□ -0.73
NR1H3-227ENST00000498548 SMDT1Q9H4I9 107 aa10.52□□□□□ -0.73
NR1H3-227ENST00000498548 CARHSP1Q9Y2V2 147 aaKnown RBP10.52□□□□□ -0.73
NR1H3-227ENST00000498548 IGLV4-60A0A075B6I1 120 aa10.51□□□□□ -0.73
NR1H3-227ENST00000498548 C9JQL5 133 aa10.51□□□□□ -0.73
NR1H3-227ENST00000498548 USP17L23D6RBM5 183 aa10.51□□□□□ -0.73
NR1H3-227ENST00000498548 SRP19P09132 144 aaKnown RBP10.51□□□□□ -0.73
NR1H3-227ENST00000498548 PEA15Q15121 130 aa10.51□□□□□ -0.73
NR1H3-227ENST00000498548 KRTAP26-1Q6PEX3 210 aa10.51□□□□□ -0.73
NR1H3-227ENST00000498548 Q6ZSA8 131 aa10.51□□□□□ -0.73
NR1H3-227ENST00000498548 SMIM7Q9BQ49 75 aa10.51□□□□□ -0.73
NR1H3-227ENST00000498548 SEC11CQ9BY50 192 aa10.51□□□□□ -0.73
NR1H3-227ENST00000498548 GFRA4Q9GZZ7 299 aa10.51□□□□□ -0.73
NR1H3-227ENST00000498548 PRR34Q9NV39 138 aa10.51□□□□□ -0.73
NR1H3-227ENST00000498548 IGLV10-54A0A075B6I4 117 aa10.5□□□□□ -0.73
NR1H3-227ENST00000498548 ZNF727A8MUV8 499 aa10.5□□□□□ -0.73
NR1H3-227ENST00000498548 A8MWL6 223 aa10.5□□□□□ -0.73
NR1H3-227ENST00000498548 ADCYAP1P18509 176 aa10.5□□□□□ -0.73
NR1H3-227ENST00000498548 REG3AQ06141 175 aa10.5□□□□□ -0.73
NR1H3-227ENST00000498548 AMTP48728 403 aa10.49□□□□□ -0.73
NR1H3-227ENST00000498548 COTL1Q14019 142 aa10.49□□□□□ -0.73
NR1H3-227ENST00000498548 SMIM15Q7Z3B0 74 aa10.49□□□□□ -0.73
NR1H3-227ENST00000498548 LINC01551Q86U37 167 aa10.49□□□□□ -0.73
NR1H3-227ENST00000498548 UBE2L6O14933 153 aa10.48□□□□□ -0.73
NR1H3-227ENST00000498548 APOC3P02656 99 aa10.48□□□□□ -0.73
NR1H3-227ENST00000498548 PRSS1P07477 247 aa10.48□□□□□ -0.73
NR1H3-227ENST00000498548 C14orf177Q52M58 125 aa10.48□□□□□ -0.73
NR1H3-227ENST00000498548 F8W036 122 aa10.47□□□□□ -0.73
NR1H3-227ENST00000498548 GAS8-AS1O95177 125 aa10.47□□□□□ -0.73
NR1H3-227ENST00000498548 SCXQ7RTU7 201 aa10.47□□□□□ -0.73
NR1H3-227ENST00000498548 A0A1B0GUV1 79 aa10.46□□□□□ -0.73
NR1H3-227ENST00000498548 NDUFS6O75380 124 aaKnown RBP10.46□□□□□ -0.73
NR1H3-227ENST00000498548 SCO1O75880 301 aa10.46□□□□□ -0.73
NR1H3-227ENST00000498548 CT83Q5H943 113 aa10.46□□□□□ -0.73
NR1H3-227ENST00000498548 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.45□□□□□ -0.74
NR1H3-227ENST00000498548 IGKV3OR2-268A0A0C4DH90 116 aa10.45□□□□□ -0.74
NR1H3-227ENST00000498548 IGKV2-29A2NJV5 120 aaPredicted RBP10.45□□□□□ -0.74
NR1H3-227ENST00000498548 HIGD1CA8MV81 97 aa10.45□□□□□ -0.74
NR1H3-227ENST00000498548 LINC00528Q8N1L1 170 aa10.45□□□□□ -0.74
NR1H3-227ENST00000498548 SVBPQ8N300 66 aa10.45□□□□□ -0.74
NR1H3-227ENST00000498548 TSKUQ8WUA8 353 aa10.45□□□□□ -0.74
NR1H3-227ENST00000498548 BORCS7Q96B45 105 aa10.45□□□□□ -0.74
NR1H3-227ENST00000498548 OSTCQ9NRP0 149 aa10.45□□□□□ -0.74
NR1H3-227ENST00000498548 A0A1B0GUT8 65 aa10.43□□□□□ -0.74
NR1H3-227ENST00000498548 SDHAF1A6NFY7 115 aa10.43□□□□□ -0.74
NR1H3-227ENST00000498548 PMCHP20382 165 aa10.43□□□□□ -0.74
NR1H3-227ENST00000498548 TMEM241Q24JQ0 296 aa10.43□□□□□ -0.74
NR1H3-227ENST00000498548 CIRBP-AS1Q8TBR5 109 aa10.43□□□□□ -0.74
NR1H3-227ENST00000498548 RNF185Q96GF1 192 aa10.43□□□□□ -0.74
NR1H3-227ENST00000498548 CHAC1Q9BUX1 264 aa10.43□□□□□ -0.74
NR1H3-227ENST00000498548 V9GYV3 84 aa10.43□□□□□ -0.74
NR1H3-227ENST00000498548 TRAV8-4A0A0B4J246 113 aa10.42□□□□□ -0.74
NR1H3-227ENST00000498548 RPL23P62829 140 aaKnown RBP10.42□□□□□ -0.74
NR1H3-227ENST00000498548 ISOC2Q96AB3 205 aa10.42□□□□□ -0.74
NR1H3-227ENST00000498548 SNAPINO95295 136 aa10.41□□□□□ -0.74
NR1H3-227ENST00000498548 APCSP02743 223 aa10.41□□□□□ -0.74
NR1H3-227ENST00000498548 RAB4AP20338 218 aa10.41□□□□□ -0.74
NR1H3-227ENST00000498548 AMMECR1LQ6DCA0 310 aa10.41□□□□□ -0.74
NR1H3-227ENST00000498548 RNASEKQ6P5S7 137 aaKnown RBP10.41□□□□□ -0.74
NR1H3-227ENST00000498548 AMN1Q8IY45 258 aa10.41□□□□□ -0.74
NR1H3-227ENST00000498548 CLRN3Q8NCR9 226 aa10.41□□□□□ -0.74
NR1H3-227ENST00000498548 NUP35Q8NFH5 326 aa10.41□□□□□ -0.74
NR1H3-227ENST00000498548 TMEM191AQ9H0A3 160 aa10.41□□□□□ -0.74
NR1H3-227ENST00000498548 FAM231BA6NCW3 169 aa10.4□□□□□ -0.74
NR1H3-227ENST00000498548 GAGE12HA6NDE8 117 aa10.4□□□□□ -0.74
NR1H3-227ENST00000498548 SMKR1H3BMG3 65 aa10.4□□□□□ -0.74
NR1H3-227ENST00000498548 I3L3M4 83 aa10.4□□□□□ -0.74
NR1H3-227ENST00000498548 NCR2O95944 276 aa10.4□□□□□ -0.74
NR1H3-227ENST00000498548 PLA2G1BP04054 148 aaKnown RBP10.4□□□□□ -0.74
NR1H3-227ENST00000498548 RPS10P46783 165 aaKnown RBP10.4□□□□□ -0.74
NR1H3-227ENST00000498548 ADIRFQ15847 76 aa10.4□□□□□ -0.74
NR1H3-227ENST00000498548 DGAT2L7PQ6IED9 249 aa10.4□□□□□ -0.74
NR1H3-227ENST00000498548 C9orf163Q8N9P6 203 aa10.4□□□□□ -0.74
NR1H3-227ENST00000498548 ST20Q9HBF5 79 aa10.4□□□□□ -0.74
NR1H3-227ENST00000498548 FLG2Q5D862 2391 aaPredicted RBP10.39□□□□□ -0.75
NR1H3-227ENST00000498548 TRBV6-5A0A0K0K1A5 114 aa10.39□□□□□ -0.75
NR1H3-227ENST00000498548 hDV102S1A0JD36 115 aa10.39□□□□□ -0.75
NR1H3-227ENST00000498548 FGF6P10767 208 aa10.39□□□□□ -0.75
NR1H3-227ENST00000498548 FAM74A3Q4VXF1 159 aa10.39□□□□□ -0.75
NR1H3-227ENST00000498548 TMEM242Q9NWH2 141 aa10.39□□□□□ -0.75
NR1H3-227ENST00000498548 TSHBP01222 138 aa10.38□□□□□ -0.75
NR1H3-227ENST00000498548 RIGQ13278 110 aa10.38□□□□□ -0.75
NR1H3-227ENST00000498548 NAT8Q9UHE5 227 aa10.38□□□□□ -0.75
NR1H3-227ENST00000498548 PANO1I0J062 215 aa10.37□□□□□ -0.75
NR1H3-227ENST00000498548 SLPIP03973 132 aa10.37□□□□□ -0.75
NR1H3-227ENST00000498548 H7C423 109 aa10.36□□□□□ -0.75
NR1H3-227ENST00000498548 ESDP10768 282 aa10.36□□□□□ -0.75
NR1H3-227ENST00000498548 POLR2KP53803 58 aaKnown RBP10.36□□□□□ -0.75
NR1H3-227ENST00000498548 MRAP2Q96G30 205 aa10.36□□□□□ -0.75
NR1H3-227ENST00000498548 NAT8BQ9UHF3 227 aa10.36□□□□□ -0.75
NR1H3-227ENST00000498548 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.36□□□□□ -0.75
NR1H3-227ENST00000498548 MYCBP2O75592 4640 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms