RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 Q6ZRP5 223 aa8.65□□□□□ -1.02
CCDC58-207ENST00000498466 BAGE2Q86Y30 109 aa8.65□□□□□ -1.02
CCDC58-207ENST00000498466 LINC00474Q9P2X8 69 aa8.65□□□□□ -1.02
CCDC58-207ENST00000498466 S100A9P06702 114 aaKnown RBP8.64□□□□□ -1.03
CCDC58-207ENST00000498466 MLST8Q9BVC4 326 aa8.64□□□□□ -1.03
CCDC58-207ENST00000498466 TPPP3Q9BW30 176 aa8.64□□□□□ -1.03
CCDC58-207ENST00000498466 ALG5Q9Y673 324 aa8.64□□□□□ -1.03
CCDC58-207ENST00000498466 PAGE4O60829 102 aa8.63□□□□□ -1.03
CCDC58-207ENST00000498466 AMTP48728 403 aa8.63□□□□□ -1.03
CCDC58-207ENST00000498466 Q5BKY6 102 aa8.63□□□□□ -1.03
CCDC58-207ENST00000498466 RASL11AQ6T310 242 aa8.63□□□□□ -1.03
CCDC58-207ENST00000498466 PGLYRP4Q96LB8 373 aa8.63□□□□□ -1.03
CCDC58-207ENST00000498466 GVQW2A0A096LPI5 108 aaPredicted RBP8.62□□□□□ -1.03
CCDC58-207ENST00000498466 SCO2A0A1W2PP80 73 aa8.62□□□□□ -1.03
CCDC58-207ENST00000498466 COTL1Q14019 142 aa8.62□□□□□ -1.03
CCDC58-207ENST00000498466 CHCHD10Q8WYQ3 142 aaPredicted RBP8.62□□□□□ -1.03
CCDC58-207ENST00000498466 MUC2Q02817 5179 aa8.61□□□□□ -1.03
CCDC58-207ENST00000498466 FXYD6-FXYD2A0A087WZ82 144 aa8.61□□□□□ -1.03
CCDC58-207ENST00000498466 NIT2Q9NQR4 276 aa8.61□□□□□ -1.03
CCDC58-207ENST00000498466 PKIGQ9Y2B9 76 aa8.61□□□□□ -1.03
CCDC58-207ENST00000498466 FAM231BA6NCW3 169 aa8.6□□□□□ -1.03
CCDC58-207ENST00000498466 FER1L6-AS1Q8NA97 138 aa8.6□□□□□ -1.03
CCDC58-207ENST00000498466 MED28Q9H204 178 aa8.6□□□□□ -1.03
CCDC58-207ENST00000498466 PFDN1O60925 122 aa8.59□□□□□ -1.03
CCDC58-207ENST00000498466 AMMECR1LQ6DCA0 310 aa8.59□□□□□ -1.03
CCDC58-207ENST00000498466 A0A1B0GV50 99 aa8.58□□□□□ -1.04
CCDC58-207ENST00000498466 IGLC6P0CF74 106 aa8.58□□□□□ -1.04
CCDC58-207ENST00000498466 CACNG7P62955 275 aa8.58□□□□□ -1.04
CCDC58-207ENST00000498466 RNASEKQ6P5S7 137 aaKnown RBP8.58□□□□□ -1.04
CCDC58-207ENST00000498466 LINC00526Q96FQ7 95 aa8.58□□□□□ -1.04
CCDC58-207ENST00000498466 CARD19Q96LW7 228 aa8.58□□□□□ -1.04
CCDC58-207ENST00000498466 GIPP09681 153 aaPredicted RBP8.57□□□□□ -1.04
CCDC58-207ENST00000498466 TRGC1P0CF51 173 aa8.57□□□□□ -1.04
CCDC58-207ENST00000498466 FOXI1Q12951 378 aa8.57□□□□□ -1.04
CCDC58-207ENST00000498466 TMUB2Q71RG4 321 aa8.57□□□□□ -1.04
CCDC58-207ENST00000498466 XCL1P47992 114 aa8.56□□□□□ -1.04
CCDC58-207ENST00000498466 RPS20P60866 119 aaKnown RBP8.56□□□□□ -1.04
CCDC58-207ENST00000498466 OR2D3Q8NGH3 330 aa8.56□□□□□ -1.04
CCDC58-207ENST00000498466 SFT2D1Q8WV19 159 aa8.56□□□□□ -1.04
CCDC58-207ENST00000498466 KRTAP9-2Q9BYQ4 174 aa8.56□□□□□ -1.04
CCDC58-207ENST00000498466 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.55□□□□□ -1.04
CCDC58-207ENST00000498466 IGHV1-58A0A0C4DH39 117 aa8.55□□□□□ -1.04
CCDC58-207ENST00000498466 IGKV2-29A2NJV5 120 aaPredicted RBP8.55□□□□□ -1.04
CCDC58-207ENST00000498466 RPL35P42766 123 aaKnown RBP8.55□□□□□ -1.04
CCDC58-207ENST00000498466 ZNF664Q8N3J9 261 aa8.55□□□□□ -1.04
CCDC58-207ENST00000498466 KRTAP4-8Q9BYQ9 185 aa8.55□□□□□ -1.04
CCDC58-207ENST00000498466 F2Z2F3 143 aa8.54□□□□□ -1.04
CCDC58-207ENST00000498466 NTF3P20783 257 aa8.54□□□□□ -1.04
CCDC58-207ENST00000498466 PTTG1IPP53801 180 aa8.54□□□□□ -1.04
CCDC58-207ENST00000498466 GAGE2BQ13066 116 aa8.54□□□□□ -1.04
CCDC58-207ENST00000498466 FAM213BQ8TBF2 198 aa8.54□□□□□ -1.04
CCDC58-207ENST00000498466 CYTL1Q9NRR1 136 aa8.54□□□□□ -1.04
CCDC58-207ENST00000498466 PSORS1C2Q9UIG4 136 aa8.54□□□□□ -1.04
CCDC58-207ENST00000498466 TRAV26-2A0A0B4J265 109 aa8.53□□□□□ -1.04
CCDC58-207ENST00000498466 XKRY2A2RUG3 117 aa8.53□□□□□ -1.04
CCDC58-207ENST00000498466 ZNF561-AS1K7EIQ3 104 aa8.53□□□□□ -1.04
CCDC58-207ENST00000498466 MT-ND6P03923 174 aa8.53□□□□□ -1.04
CCDC58-207ENST00000498466 FGF6P10767 208 aa8.53□□□□□ -1.04
CCDC58-207ENST00000498466 SYCNQ0VAF6 134 aa8.53□□□□□ -1.04
CCDC58-207ENST00000498466 LYZL1Q6UWQ5 148 aa8.53□□□□□ -1.04
CCDC58-207ENST00000498466 Q6ZNX1 250 aa8.53□□□□□ -1.04
CCDC58-207ENST00000498466 KCNRGQ8N5I3 272 aa8.53□□□□□ -1.04
CCDC58-207ENST00000498466 OR5A1Q8NGJ0 315 aa8.53□□□□□ -1.04
CCDC58-207ENST00000498466 H7C423 109 aa8.52□□□□□ -1.05
CCDC58-207ENST00000498466 CCL25O15444 150 aa8.52□□□□□ -1.05
CCDC58-207ENST00000498466 APCSP02743 223 aa8.52□□□□□ -1.05
CCDC58-207ENST00000498466 MBD3L1Q8WWY6 194 aa8.52□□□□□ -1.05
CCDC58-207ENST00000498466 LOC107984640A0A0U1RRK4 108 aa8.51□□□□□ -1.05
CCDC58-207ENST00000498466 LINC00959A0A1B0GUT2 108 aa8.51□□□□□ -1.05
CCDC58-207ENST00000498466 A0A1W2PNN7 141 aa8.51□□□□□ -1.05
CCDC58-207ENST00000498466 ARPC5O15511 151 aa8.51□□□□□ -1.05
CCDC58-207ENST00000498466 NCR2O95944 276 aa8.51□□□□□ -1.05
CCDC58-207ENST00000498466 IFNA1P01562 189 aa8.51□□□□□ -1.05
CCDC58-207ENST00000498466 CENPWQ5EE01 88 aa8.51□□□□□ -1.05
CCDC58-207ENST00000498466 C1orf137Q5JT78 98 aa8.51□□□□□ -1.05
CCDC58-207ENST00000498466 PRR26Q8N8Z3 221 aa8.51□□□□□ -1.05
CCDC58-207ENST00000498466 GATD1Q8NB37 220 aa8.51□□□□□ -1.05
CCDC58-207ENST00000498466 BTF3L4Q96K17 158 aa8.51□□□□□ -1.05
CCDC58-207ENST00000498466 A0A0U1RQV1 116 aa8.5□□□□□ -1.05
CCDC58-207ENST00000498466 C19orf71A6NCJ1 209 aa8.5□□□□□ -1.05
CCDC58-207ENST00000498466 ZNF25P17030 456 aaPredicted RBP8.5□□□□□ -1.05
CCDC58-207ENST00000498466 CAMPP49913 170 aa8.5□□□□□ -1.05
CCDC58-207ENST00000498466 TWIST1Q15672 202 aa8.5□□□□□ -1.05
CCDC58-207ENST00000498466 TMEM101Q96IK0 257 aa8.5□□□□□ -1.05
CCDC58-207ENST00000498466 UMAD1C9J7I0 102 aa8.49□□□□□ -1.05
CCDC58-207ENST00000498466 ISOC2Q96AB3 205 aa8.49□□□□□ -1.05
CCDC58-207ENST00000498466 RPL39LQ96EH5 51 aaKnown RBP8.49□□□□□ -1.05
CCDC58-207ENST00000498466 H2AFB1P0C5Y9 115 aa8.48□□□□□ -1.05
CCDC58-207ENST00000498466 BCL2P10415 239 aa8.48□□□□□ -1.05
CCDC58-207ENST00000498466 SS18Q15532 418 aa8.48□□□□□ -1.05
CCDC58-207ENST00000498466 C9orf116Q5BN46 136 aaPredicted RBP8.48□□□□□ -1.05
CCDC58-207ENST00000498466 C9orf62Q8N4C0 152 aa8.48□□□□□ -1.05
CCDC58-207ENST00000498466 C11orf52Q96A22 123 aa8.48□□□□□ -1.05
CCDC58-207ENST00000498466 IGLV4-69A0A075B6H9 119 aa8.47□□□□□ -1.05
CCDC58-207ENST00000498466 G3V3Q6 166 aa8.47□□□□□ -1.05
CCDC58-207ENST00000498466 CTRLP40313 264 aa8.47□□□□□ -1.05
CCDC58-207ENST00000498466 GNG4P50150 75 aa8.47□□□□□ -1.05
CCDC58-207ENST00000498466 PRR4Q16378 134 aa8.47□□□□□ -1.05
CCDC58-207ENST00000498466 CD164L2Q6UWJ8 174 aa8.47□□□□□ -1.05
CCDC58-207ENST00000498466 PHF5AQ7RTV0 110 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms