RNA–Protein interactions for RNA: ENST00000498439.1

CHTF18-213, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 2

Gene CHTF18, Length 673 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-213ENST00000498439 PKIGQ9Y2B9 76 aa11.63□□□□□ -0.55
CHTF18-213ENST00000498439 NTF3P20783 257 aa11.62□□□□□ -0.55
CHTF18-213ENST00000498439 CENPWQ5EE01 88 aa11.62□□□□□ -0.55
CHTF18-213ENST00000498439 IGLV4-60A0A075B6I1 120 aa11.61□□□□□ -0.55
CHTF18-213ENST00000498439 A0A087WYN8 130 aa11.61□□□□□ -0.55
CHTF18-213ENST00000498439 TRAV1-1A0A0B4J248 108 aa11.61□□□□□ -0.55
CHTF18-213ENST00000498439 C19orf71A6NCJ1 209 aa11.61□□□□□ -0.55
CHTF18-213ENST00000498439 RPS10P46783 165 aaKnown RBP11.61□□□□□ -0.55
CHTF18-213ENST00000498439 HNRNPA3P51991 378 aaKnown RBP11.61□□□□□ -0.55
CHTF18-213ENST00000498439 SMIM15Q7Z3B0 74 aa11.61□□□□□ -0.55
CHTF18-213ENST00000498439 AMMECR1LQ6DCA0 310 aa11.6□□□□□ -0.55
CHTF18-213ENST00000498439 LYZL1Q6UWQ5 148 aa11.6□□□□□ -0.55
CHTF18-213ENST00000498439 C9orf62Q8N4C0 152 aa11.6□□□□□ -0.55
CHTF18-213ENST00000498439 SMLR1H3BR10 107 aa11.59□□□□□ -0.55
CHTF18-213ENST00000498439 H7C423 109 aa11.59□□□□□ -0.55
CHTF18-213ENST00000498439 PANO1I0J062 215 aa11.59□□□□□ -0.55
CHTF18-213ENST00000498439 NDUFS6O75380 124 aaKnown RBP11.59□□□□□ -0.55
CHTF18-213ENST00000498439 TEX261Q6UWH6 196 aa11.59□□□□□ -0.55
CHTF18-213ENST00000498439 SPACA4Q8TDM5 124 aa11.59□□□□□ -0.55
CHTF18-213ENST00000498439 MED9Q9NWA0 146 aa11.59□□□□□ -0.55
CHTF18-213ENST00000498439 NCR2O95944 276 aa11.58□□□□□ -0.56
CHTF18-213ENST00000498439 TWIST1Q15672 202 aa11.58□□□□□ -0.56
CHTF18-213ENST00000498439 PLAC8Q9NZF1 115 aa11.58□□□□□ -0.56
CHTF18-213ENST00000498439 FAT3Q8TDW7 4589 aa11.58□□□□□ -0.56
CHTF18-213ENST00000498439 GAGE12HA6NDE8 117 aa11.57□□□□□ -0.56
CHTF18-213ENST00000498439 TAGLN2P37802 199 aaKnown RBP11.57□□□□□ -0.56
CHTF18-213ENST00000498439 MEF2BQ02080 365 aaPredicted RBP11.57□□□□□ -0.56
CHTF18-213ENST00000498439 LINC00474Q9P2X8 69 aa11.57□□□□□ -0.56
CHTF18-213ENST00000498439 RAB19A4D1S5 217 aa11.56□□□□□ -0.56
CHTF18-213ENST00000498439 FAM210AQ96ND0 272 aa11.56□□□□□ -0.56
CHTF18-213ENST00000498439 GTSF1Q8WW33 167 aa11.55□□□□□ -0.56
CHTF18-213ENST00000498439 BTF3L4Q96K17 158 aa11.55□□□□□ -0.56
CHTF18-213ENST00000498439 IGKV3OR2-268A0A0C4DH90 116 aa11.54□□□□□ -0.56
CHTF18-213ENST00000498439 SLPIP03973 132 aa11.54□□□□□ -0.56
CHTF18-213ENST00000498439 MT1HL1P0DM35 61 aa11.54□□□□□ -0.56
CHTF18-213ENST00000498439 COX6A2Q02221 97 aa11.54□□□□□ -0.56
CHTF18-213ENST00000498439 MAJINQ3KP22 176 aa11.54□□□□□ -0.56
CHTF18-213ENST00000498439 RNASEKQ6P5S7 137 aaKnown RBP11.54□□□□□ -0.56
CHTF18-213ENST00000498439 NUDT10Q8NFP7 164 aa11.54□□□□□ -0.56
CHTF18-213ENST00000498439 NUDT11Q96G61 164 aa11.54□□□□□ -0.56
CHTF18-213ENST00000498439 GFRA4Q9GZZ7 299 aa11.54□□□□□ -0.56
CHTF18-213ENST00000498439 PHOX2AO14813 284 aa11.53□□□□□ -0.56
CHTF18-213ENST00000498439 ZNF25P17030 456 aaPredicted RBP11.53□□□□□ -0.56
CHTF18-213ENST00000498439 TMEM101Q96IK0 257 aa11.53□□□□□ -0.56
CHTF18-213ENST00000498439 APCSP02743 223 aa11.52□□□□□ -0.57
CHTF18-213ENST00000498439 CHTF8P0CG12 524 aa11.52□□□□□ -0.57
CHTF18-213ENST00000498439 CHCHD10Q8WYQ3 142 aaPredicted RBP11.52□□□□□ -0.57
CHTF18-213ENST00000498439 CNFNQ9BYD5 112 aa11.52□□□□□ -0.57
CHTF18-213ENST00000498439 HMCN2Q8NDA2 5059 aa11.51□□□□□ -0.57
CHTF18-213ENST00000498439 CTRLP40313 264 aa11.51□□□□□ -0.57
CHTF18-213ENST00000498439 STPG4Q8N801 248 aa11.51□□□□□ -0.57
CHTF18-213ENST00000498439 C15orf56Q8N910 161 aa11.51□□□□□ -0.57
CHTF18-213ENST00000498439 GATD1Q8NB37 220 aa11.51□□□□□ -0.57
CHTF18-213ENST00000498439 PMCHP20382 165 aa11.5□□□□□ -0.57
CHTF18-213ENST00000498439 HIGD2BQ4VC39 106 aa11.5□□□□□ -0.57
CHTF18-213ENST00000498439 RPP21Q9H633 154 aaKnown RBP11.5□□□□□ -0.57
CHTF18-213ENST00000498439 GVQW2A0A096LPI5 108 aaPredicted RBP11.49□□□□□ -0.57
CHTF18-213ENST00000498439 IGKV2-24A0A0C4DH68 120 aa11.49□□□□□ -0.57
CHTF18-213ENST00000498439 BCL2P10415 239 aa11.49□□□□□ -0.57
CHTF18-213ENST00000498439 REG3GQ6UW15 175 aa11.49□□□□□ -0.57
CHTF18-213ENST00000498439 OR5A1Q8NGJ0 315 aa11.49□□□□□ -0.57
CHTF18-213ENST00000498439 PRSS3P2Q8NHM4 247 aa11.49□□□□□ -0.57
CHTF18-213ENST00000498439 LINC01600Q96MT4 127 aa11.49□□□□□ -0.57
CHTF18-213ENST00000498439 I3L3M4 83 aa11.48□□□□□ -0.57
CHTF18-213ENST00000498439 FGF6P10767 208 aa11.48□□□□□ -0.57
CHTF18-213ENST00000498439 BORCS7Q96B45 105 aa11.48□□□□□ -0.57
CHTF18-213ENST00000498439 IGHV1-58A0A0C4DH39 117 aa11.47□□□□□ -0.57
CHTF18-213ENST00000498439 SDHAF1A6NFY7 115 aa11.47□□□□□ -0.57
CHTF18-213ENST00000498439 SS18Q15532 418 aa11.47□□□□□ -0.57
CHTF18-213ENST00000498439 SPINK6Q6UWN8 80 aa11.47□□□□□ -0.57
CHTF18-213ENST00000498439 TRBV20OR9-2A0A075B6H5 130 aa11.46□□□□□ -0.57
CHTF18-213ENST00000498439 A8MWL6 223 aa11.46□□□□□ -0.57
CHTF18-213ENST00000498439 ZNF561-AS1K7EIQ3 104 aa11.46□□□□□ -0.57
CHTF18-213ENST00000498439 SMAGPQ0VAQ4 97 aa11.46□□□□□ -0.57
CHTF18-213ENST00000498439 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.45□□□□□ -0.58
CHTF18-213ENST00000498439 TRAV26-2A0A0B4J265 109 aa11.45□□□□□ -0.58
CHTF18-213ENST00000498439 IGKV2-29A2NJV5 120 aaPredicted RBP11.45□□□□□ -0.58
CHTF18-213ENST00000498439 GATCO43716 136 aaKnown RBP11.45□□□□□ -0.58
CHTF18-213ENST00000498439 Q6ZNX1 250 aa11.45□□□□□ -0.58
CHTF18-213ENST00000498439 LYPD6BQ8NI32 183 aa11.45□□□□□ -0.58
CHTF18-213ENST00000498439 OCC1Q8TAD7 63 aa11.45□□□□□ -0.58
CHTF18-213ENST00000498439 ISOC2Q96AB3 205 aa11.45□□□□□ -0.58
CHTF18-213ENST00000498439 RNASE7Q9H1E1 156 aaKnown RBP11.45□□□□□ -0.58
CHTF18-213ENST00000498439 PKHD1L1Q86WI1 4243 aa11.44□□□□□ -0.58
CHTF18-213ENST00000498439 PRR3P79522 188 aaKnown RBP11.44□□□□□ -0.58
CHTF18-213ENST00000498439 SLC51BQ86UW2 128 aa11.44□□□□□ -0.58
CHTF18-213ENST00000498439 RPL39LQ96EH5 51 aaKnown RBP11.44□□□□□ -0.58
CHTF18-213ENST00000498439 UBR4Q5T4S7 5183 aa11.44□□□□□ -0.58
CHTF18-213ENST00000498439 TRBV6-5A0A0K0K1A5 114 aa11.43□□□□□ -0.58
CHTF18-213ENST00000498439 FOXI1Q12951 378 aa11.43□□□□□ -0.58
CHTF18-213ENST00000498439 Q6ZRP5 223 aa11.43□□□□□ -0.58
CHTF18-213ENST00000498439 MRAP2Q96G30 205 aa11.43□□□□□ -0.58
CHTF18-213ENST00000498439 ST20Q9HBF5 79 aa11.43□□□□□ -0.58
CHTF18-213ENST00000498439 LINC00959A0A1B0GUT2 108 aa11.42□□□□□ -0.58
CHTF18-213ENST00000498439 CCL25O15444 150 aa11.42□□□□□ -0.58
CHTF18-213ENST00000498439 XCL1P47992 114 aa11.42□□□□□ -0.58
CHTF18-213ENST00000498439 CARD19Q96LW7 228 aa11.42□□□□□ -0.58
CHTF18-213ENST00000498439 A0A096LNI7 61 aa11.41□□□□□ -0.58
CHTF18-213ENST00000498439 FOXA3P55318 350 aaPredicted RBP11.41□□□□□ -0.58
CHTF18-213ENST00000498439 FAM231DQ6ZW35 169 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms