RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 PYGO1Q9Y3Y4 419 aa14.47□□□□□ -0.09
NKX2-1-202ENST00000498187 RBMY1A1P0DJD3 496 aaKnown RBP14.46□□□□□ -0.09
NKX2-1-202ENST00000498187 RBMY1CP0DJD4 496 aa14.46□□□□□ -0.09
NKX2-1-202ENST00000498187 RBMY1FQ15415 496 aaKnown RBP14.46□□□□□ -0.09
NKX2-1-202ENST00000498187 CENPEQ02224 2701 aa14.46□□□□□ -0.1
NKX2-1-202ENST00000498187 CSMD2Q7Z408 3487 aa14.45□□□□□ -0.1
NKX2-1-202ENST00000498187 IGHV3-30-3P0DP02 117 aa14.45□□□□□ -0.1
NKX2-1-202ENST00000498187 HTN1P15515 57 aa14.45□□□□□ -0.1
NKX2-1-202ENST00000498187 ZFAND6Q6FIF0 208 aa14.45□□□□□ -0.1
NKX2-1-202ENST00000498187 RNF152Q8N8N0 203 aa14.45□□□□□ -0.1
NKX2-1-202ENST00000498187 SPXQ9BT56 116 aa14.45□□□□□ -0.1
NKX2-1-202ENST00000498187 TIMM21Q9BVV7 248 aa14.45□□□□□ -0.1
NKX2-1-202ENST00000498187 KNCNA6PVL3 124 aa14.44□□□□□ -0.1
NKX2-1-202ENST00000498187 TENM4Q6N022 2769 aa14.44□□□□□ -0.1
NKX2-1-202ENST00000498187 TRBV30A0A0K0K1B3 111 aa14.44□□□□□ -0.1
NKX2-1-202ENST00000498187 CD28P10747 220 aa14.44□□□□□ -0.1
NKX2-1-202ENST00000498187 LINC01620Q4KN68 170 aa14.44□□□□□ -0.1
NKX2-1-202ENST00000498187 TEX29Q8N6K0 151 aa14.44□□□□□ -0.1
NKX2-1-202ENST00000498187 EDA2RQ9HAV5 297 aa14.44□□□□□ -0.1
NKX2-1-202ENST00000498187 MRPS36P82909 103 aaKnown RBP14.43□□□□□ -0.1
NKX2-1-202ENST00000498187 Q6YL49 198 aa14.43□□□□□ -0.1
NKX2-1-202ENST00000498187 LINC01600Q96MT4 127 aa14.43□□□□□ -0.1
NKX2-1-202ENST00000498187 IGHV3-73A0A0B4J1V6 119 aa14.42□□□□□ -0.1
NKX2-1-202ENST00000498187 SLURP1P55000 103 aa14.42□□□□□ -0.1
NKX2-1-202ENST00000498187 DEFB136Q30KP8 78 aa14.42□□□□□ -0.1
NKX2-1-202ENST00000498187 BEX4Q9NWD9 120 aaPredicted RBP14.42□□□□□ -0.1
NKX2-1-202ENST00000498187 C18orf65Q6ZTR6 163 aa14.42□□□□□ -0.1
NKX2-1-202ENST00000498187 DEFB131AP59861 70 aa14.41□□□□□ -0.1
NKX2-1-202ENST00000498187 NTN5Q8WTR8 489 aaPredicted RBP14.41□□□□□ -0.1
NKX2-1-202ENST00000498187 LITAFQ99732 161 aa14.41□□□□□ -0.1
NKX2-1-202ENST00000498187 ANAPC13Q9BS18 74 aa14.41□□□□□ -0.1
NKX2-1-202ENST00000498187 IGHV1-58A0A0C4DH39 117 aa14.4□□□□□ -0.1
NKX2-1-202ENST00000498187 TRBV10-2A0A0K0K1G8 114 aa14.4□□□□□ -0.1
NKX2-1-202ENST00000498187 FSHBP01225 129 aa14.4□□□□□ -0.1
NKX2-1-202ENST00000498187 PRSS2P07478 247 aa14.4□□□□□ -0.1
NKX2-1-202ENST00000498187 PROK1P58294 105 aa14.4□□□□□ -0.1
NKX2-1-202ENST00000498187 ANKRD17O75179 2603 aaKnown RBP14.4□□□□□ -0.1
NKX2-1-202ENST00000498187 CITED1Q99966 193 aa14.4□□□□□ -0.11
NKX2-1-202ENST00000498187 USP9YO00507 2555 aaPredicted RBP14.39□□□□□ -0.11
NKX2-1-202ENST00000498187 HELZ2Q9BYK8 2649 aaKnown RBP14.39□□□□□ -0.11
NKX2-1-202ENST00000498187 ADARB2-AS1A8MUL3 147 aa14.39□□□□□ -0.11
NKX2-1-202ENST00000498187 TRIAP1O43715 76 aa14.39□□□□□ -0.11
NKX2-1-202ENST00000498187 RPL13AP40429 203 aaKnown RBP14.39□□□□□ -0.11
NKX2-1-202ENST00000498187 RNF183Q96D59 192 aa14.39□□□□□ -0.11
NKX2-1-202ENST00000498187 SPANXDQ9BXN6 97 aa14.39□□□□□ -0.11
NKX2-1-202ENST00000498187 SPANXCQ9NY87 97 aa14.39□□□□□ -0.11
NKX2-1-202ENST00000498187 TNFRSF18Q9Y5U5 241 aa14.39□□□□□ -0.11
NKX2-1-202ENST00000498187 PRM2P04554 102 aa14.38□□□□□ -0.11
NKX2-1-202ENST00000498187 RBMY1BA6NDE4 496 aaKnown RBP14.38□□□□□ -0.11
NKX2-1-202ENST00000498187 RBMY1EA6NEQ0 496 aaKnown RBP14.38□□□□□ -0.11
NKX2-1-202ENST00000498187 SNCGO76070 127 aa14.38□□□□□ -0.11
NKX2-1-202ENST00000498187 RBMY1DP0C7P1 496 aaKnown RBP14.38□□□□□ -0.11
NKX2-1-202ENST00000498187 FAM104AQ969W3 186 aa14.38□□□□□ -0.11
NKX2-1-202ENST00000498187 NDUFA12Q9UI09 145 aa14.38□□□□□ -0.11
NKX2-1-202ENST00000498187 TRAV8-3A0A0A6YYJ7 113 aa14.37□□□□□ -0.11
NKX2-1-202ENST00000498187 H3BMM0 161 aa14.37□□□□□ -0.11
NKX2-1-202ENST00000498187 DUX3Q96PT4 197 aa14.37□□□□□ -0.11
NKX2-1-202ENST00000498187 COX6CP09669 75 aa14.37□□□□□ -0.11
NKX2-1-202ENST00000498187 IGHV4-31P0DP07 118 aa14.37□□□□□ -0.11
NKX2-1-202ENST00000498187 ZANQ9Y493 2812 aa14.36□□□□□ -0.11
NKX2-1-202ENST00000498187 TINCRA0A1B0GVN0 87 aa14.36□□□□□ -0.11
NKX2-1-202ENST00000498187 ICOSQ9Y6W8 199 aa14.36□□□□□ -0.11
NKX2-1-202ENST00000498187 A8MTW9 85 aa14.36□□□□□ -0.11
NKX2-1-202ENST00000498187 VSIG2Q96IQ7 327 aa14.36□□□□□ -0.11
NKX2-1-202ENST00000498187 NBPF19A0A087WUL8 3843 aa14.35□□□□□ -0.11
NKX2-1-202ENST00000498187 GAGE2BQ13066 116 aa14.35□□□□□ -0.11
NKX2-1-202ENST00000498187 MIAQ16674 131 aa14.35□□□□□ -0.11
NKX2-1-202ENST00000498187 GAGE2EQ4V326 116 aa14.35□□□□□ -0.11
NKX2-1-202ENST00000498187 CEMP1Q6PRD7 247 aaPredicted RBP14.35□□□□□ -0.11
NKX2-1-202ENST00000498187 SPANXA1Q9NS26 97 aa14.35□□□□□ -0.11
NKX2-1-202ENST00000498187 GAGE2DQ9UEU5 116 aa14.35□□□□□ -0.11
NKX2-1-202ENST00000498187 CR1P17927 2039 aa14.35□□□□□ -0.11
NKX2-1-202ENST00000498187 NACAE9PAV3 2078 aa14.35□□□□□ -0.11
NKX2-1-202ENST00000498187 ADAMTSL4-AS1Q5T5F5 129 aa14.35□□□□□ -0.11
NKX2-1-202ENST00000498187 TMEM61Q8N0U2 210 aa14.35□□□□□ -0.11
NKX2-1-202ENST00000498187 TRAV8-4A0A0B4J246 113 aa14.34□□□□□ -0.11
NKX2-1-202ENST00000498187 TEX49A0A1B0GTD5 131 aa14.34□□□□□ -0.11
NKX2-1-202ENST00000498187 YAE1D1Q9NRH1 226 aa14.34□□□□□ -0.11
NKX2-1-202ENST00000498187 CREBBPQ92793 2442 aa14.34□□□□□ -0.11
NKX2-1-202ENST00000498187 UBE2WQ96B02 151 aa14.33□□□□□ -0.11
NKX2-1-202ENST00000498187 Q9UF83 564 aa14.33□□□□□ -0.11
NKX2-1-202ENST00000498187 POLQO75417 2590 aa14.33□□□□□ -0.12
NKX2-1-202ENST00000498187 FBN2P35556 2912 aa14.33□□□□□ -0.12
NKX2-1-202ENST00000498187 C2orf82Q6UX34 121 aa14.33□□□□□ -0.12
NKX2-1-202ENST00000498187 ZNF415Q09FC8 603 aa14.32□□□□□ -0.12
NKX2-1-202ENST00000498187 PIK3CD-AS1Q5SR53 167 aa14.32□□□□□ -0.12
NKX2-1-202ENST00000498187 RNASE13Q5GAN3 156 aaKnown RBP14.32□□□□□ -0.12
NKX2-1-202ENST00000498187 Q6ZSN1 163 aa14.32□□□□□ -0.12
NKX2-1-202ENST00000498187 UBE2D4Q9Y2X8 147 aa14.32□□□□□ -0.12
NKX2-1-202ENST00000498187 H3BT86 120 aa14.31□□□□□ -0.12
NKX2-1-202ENST00000498187 CHCHD7Q9BUK0 85 aa14.31□□□□□ -0.12
NKX2-1-202ENST00000498187 PEMTQ9UBM1 199 aa14.31□□□□□ -0.12
NKX2-1-202ENST00000498187 LRRC75A-AS1Q8N1F1 130 aa14.31□□□□□ -0.12
NKX2-1-202ENST00000498187 TRAV4A0A0B4J268 109 aa14.3□□□□□ -0.12
NKX2-1-202ENST00000498187 TIMM17BO60830 172 aa14.3□□□□□ -0.12
NKX2-1-202ENST00000498187 KHDC1LQ5JSQ8 128 aa14.3□□□□□ -0.12
NKX2-1-202ENST00000498187 MAP6D1Q9H9H5 199 aa14.3□□□□□ -0.12
NKX2-1-202ENST00000498187 H7C423 109 aa14.3□□□□□ -0.12
NKX2-1-202ENST00000498187 IFITM1P13164 125 aa14.3□□□□□ -0.12
NKX2-1-202ENST00000498187 Q6Q795 121 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms