RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 RPL36AP83881 106 aaKnown RBP12.61□□□□□ -0.39
CHRNA4-206ENST00000498043 GAGE1Q13065 139 aa12.61□□□□□ -0.39
CHRNA4-206ENST00000498043 GAGE4Q13068 117 aa12.61□□□□□ -0.39
CHRNA4-206ENST00000498043 GAGE5Q13069 117 aa12.61□□□□□ -0.39
CHRNA4-206ENST00000498043 GAGE13Q4V321 117 aa12.61□□□□□ -0.39
CHRNA4-206ENST00000498043 RPL36ALQ969Q0 106 aaKnown RBP12.61□□□□□ -0.39
CHRNA4-206ENST00000498043 LOC100131303A0A0U1RQF7 123 aa12.61□□□□□ -0.39
CHRNA4-206ENST00000498043 IGIPA6NJ69 53 aa12.61□□□□□ -0.39
CHRNA4-206ENST00000498043 FHL2Q14192 279 aa12.61□□□□□ -0.39
CHRNA4-206ENST00000498043 A8MZ25 164 aa12.6□□□□□ -0.39
CHRNA4-206ENST00000498043 CIDEAO60543 219 aa12.6□□□□□ -0.39
CHRNA4-206ENST00000498043 COTL1Q14019 142 aa12.6□□□□□ -0.39
CHRNA4-206ENST00000498043 ZMAT4Q9H898 229 aa12.6□□□□□ -0.39
CHRNA4-206ENST00000498043 RETNQ9HD89 108 aa12.6□□□□□ -0.39
CHRNA4-206ENST00000498043 MRPL35Q9NZE8 188 aaKnown RBP12.6□□□□□ -0.39
CHRNA4-206ENST00000498043 DNAH3Q8TD57 4116 aa12.6□□□□□ -0.39
CHRNA4-206ENST00000498043 A0A087WX48 190 aa12.6□□□□□ -0.39
CHRNA4-206ENST00000498043 TRBV6-4A0A1B0GX49 114 aa12.6□□□□□ -0.39
CHRNA4-206ENST00000498043 LINC01549A6NIU2 74 aa12.6□□□□□ -0.39
CHRNA4-206ENST00000498043 LYRM9A8MSI8 78 aa12.6□□□□□ -0.39
CHRNA4-206ENST00000498043 TIMM17AQ99595 171 aa12.59□□□□□ -0.39
CHRNA4-206ENST00000498043 CELA1Q9UNI1 258 aa12.59□□□□□ -0.39
CHRNA4-206ENST00000498043 IGLC3P0DOY3 106 aa12.58□□□□□ -0.39
CHRNA4-206ENST00000498043 TCTAP57738 103 aa12.58□□□□□ -0.39
CHRNA4-206ENST00000498043 C14orf144Q96I85 54 aa12.58□□□□□ -0.39
CHRNA4-206ENST00000498043 TRAV12-1A0A0B4J245 112 aa12.58□□□□□ -0.4
CHRNA4-206ENST00000498043 DPM2O94777 84 aa12.58□□□□□ -0.4
CHRNA4-206ENST00000498043 IGKCP01834 107 aa12.58□□□□□ -0.4
CHRNA4-206ENST00000498043 UBE2D3P61077 147 aa12.58□□□□□ -0.4
CHRNA4-206ENST00000498043 UBE2D2P62837 147 aa12.58□□□□□ -0.4
CHRNA4-206ENST00000498043 ZC2HC1BQ5TFG8 222 aa12.58□□□□□ -0.4
CHRNA4-206ENST00000498043 TMEM141Q96I45 108 aa12.58□□□□□ -0.4
CHRNA4-206ENST00000498043 CHCHD7Q9BUK0 85 aa12.58□□□□□ -0.4
CHRNA4-206ENST00000498043 PRB2P02812 416 aaPredicted RBP12.57□□□□□ -0.4
CHRNA4-206ENST00000498043 STPG4Q8N801 248 aa12.57□□□□□ -0.4
CHRNA4-206ENST00000498043 OPRPNQ99935 248 aaPredicted RBP12.57□□□□□ -0.4
CHRNA4-206ENST00000498043 MIEN1Q9BRT3 115 aa12.57□□□□□ -0.4
CHRNA4-206ENST00000498043 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.57□□□□□ -0.4
CHRNA4-206ENST00000498043 IGKV2-29A2NJV5 120 aaPredicted RBP12.57□□□□□ -0.4
CHRNA4-206ENST00000498043 TP73-AS1Q9UF72 201 aa12.57□□□□□ -0.4
CHRNA4-206ENST00000498043 CHTOPQ9Y3Y2 248 aaKnown RBP12.57□□□□□ -0.4
CHRNA4-206ENST00000498043 PRSS29PA6NIE9 313 aa12.56□□□□□ -0.4
CHRNA4-206ENST00000498043 F8VRH5 84 aa12.56□□□□□ -0.4
CHRNA4-206ENST00000498043 DAZ4Q86SG3 579 aaKnown RBP12.56□□□□□ -0.4
CHRNA4-206ENST00000498043 PRADC1Q9BSG0 188 aa12.56□□□□□ -0.4
CHRNA4-206ENST00000498043 DAZ3Q9NR90 486 aaKnown RBP12.56□□□□□ -0.4
CHRNA4-206ENST00000498043 NOTCH1P46531 2555 aa12.56□□□□□ -0.4
CHRNA4-206ENST00000498043 DAD1P61803 113 aa12.55□□□□□ -0.4
CHRNA4-206ENST00000498043 ANKRD39Q53RE8 183 aa12.55□□□□□ -0.4
CHRNA4-206ENST00000498043 HHLA3Q9XRX5 114 aa12.55□□□□□ -0.4
CHRNA4-206ENST00000498043 CEMP1Q6PRD7 247 aaPredicted RBP12.55□□□□□ -0.4
CHRNA4-206ENST00000498043 UQCR10Q9UDW1 63 aa12.55□□□□□ -0.4
CHRNA4-206ENST00000498043 PLNP26678 52 aa12.54□□□□□ -0.4
CHRNA4-206ENST00000498043 PMVKQ15126 192 aa12.54□□□□□ -0.4
CHRNA4-206ENST00000498043 IGLV4-3A0A075B6K6 122 aa12.53□□□□□ -0.4
CHRNA4-206ENST00000498043 DEFA6Q01524 100 aa12.53□□□□□ -0.4
CHRNA4-206ENST00000498043 SPART-AS1P0CW21 52 aa12.52□□□□□ -0.4
CHRNA4-206ENST00000498043 NTM-AS1Q6ZSK4 140 aa12.52□□□□□ -0.4
CHRNA4-206ENST00000498043 CST9LQ9H4G1 147 aa12.52□□□□□ -0.4
CHRNA4-206ENST00000498043 NBEAL1Q6ZS30 2694 aa12.52□□□□□ -0.41
CHRNA4-206ENST00000498043 CRYBA4P53673 196 aa12.52□□□□□ -0.41
CHRNA4-206ENST00000498043 UBE2D4Q9Y2X8 147 aa12.52□□□□□ -0.41
CHRNA4-206ENST00000498043 LINC00694P0DN24 101 aa12.51□□□□□ -0.41
CHRNA4-206ENST00000498043 GYPEP15421 78 aa12.5□□□□□ -0.41
CHRNA4-206ENST00000498043 RNASE13Q5GAN3 156 aaKnown RBP12.5□□□□□ -0.41
CHRNA4-206ENST00000498043 PRO0255Q9UI72 69 aa12.5□□□□□ -0.41
CHRNA4-206ENST00000498043 PYGO1Q9Y3Y4 419 aa12.5□□□□□ -0.41
CHRNA4-206ENST00000498043 IGLV4-69A0A075B6H9 119 aa12.5□□□□□ -0.41
CHRNA4-206ENST00000498043 SPANXA1Q9NS26 97 aa12.5□□□□□ -0.41
CHRNA4-206ENST00000498043 NMUP48645 174 aa12.49□□□□□ -0.41
CHRNA4-206ENST00000498043 FAM104AQ969W3 186 aa12.49□□□□□ -0.41
CHRNA4-206ENST00000498043 ATP5G1P05496 136 aa12.49□□□□□ -0.41
CHRNA4-206ENST00000498043 HTN3P15516 51 aa12.49□□□□□ -0.41
CHRNA4-206ENST00000498043 HNRNPA3P51991 378 aaKnown RBP12.49□□□□□ -0.41
CHRNA4-206ENST00000498043 A0A0J9YY99 117 aa12.48□□□□□ -0.41
CHRNA4-206ENST00000498043 SLC25A34Q6PIV7 304 aa12.48□□□□□ -0.41
CHRNA4-206ENST00000498043 Q6ZUT4 128 aa12.48□□□□□ -0.41
CHRNA4-206ENST00000498043 VCX2Q9H322 139 aa12.48□□□□□ -0.41
CHRNA4-206ENST00000498043 IGKV2D-26A0A0A0MRZ7 120 aa12.47□□□□□ -0.41
CHRNA4-206ENST00000498043 C11orf86A6NJI1 115 aa12.47□□□□□ -0.41
CHRNA4-206ENST00000498043 K7EIL1 84 aa12.47□□□□□ -0.41
CHRNA4-206ENST00000498043 PAX4O43316 350 aa12.47□□□□□ -0.41
CHRNA4-206ENST00000498043 PAPPA-AS1Q5QFB9 102 aa12.47□□□□□ -0.41
CHRNA4-206ENST00000498043 GTSF1LQ9H1H1 148 aa12.47□□□□□ -0.41
CHRNA4-206ENST00000498043 COX8AP10176 69 aa12.47□□□□□ -0.41
CHRNA4-206ENST00000498043 SBSPONQ8IVN8 264 aa12.47□□□□□ -0.41
CHRNA4-206ENST00000498043 TMEM243Q9BU79 118 aa12.46□□□□□ -0.41
CHRNA4-206ENST00000498043 TRBV25-1A0A075B6N4 114 aa12.46□□□□□ -0.42
CHRNA4-206ENST00000498043 F5H768 121 aa12.46□□□□□ -0.42
CHRNA4-206ENST00000498043 CTAG1AP78358 180 aa12.46□□□□□ -0.42
CHRNA4-206ENST00000498043 AMELXQ99217 191 aa12.46□□□□□ -0.42
CHRNA4-206ENST00000498043 A0A096LPF7 62 aa12.45□□□□□ -0.42
CHRNA4-206ENST00000498043 FGF6P10767 208 aa12.45□□□□□ -0.42
CHRNA4-206ENST00000498043 PCP2Q8IVA1 136 aa12.45□□□□□ -0.42
CHRNA4-206ENST00000498043 VSIG2Q96IQ7 327 aa12.45□□□□□ -0.42
CHRNA4-206ENST00000498043 MGAM2Q2M2H8 2515 aa12.45□□□□□ -0.42
CHRNA4-206ENST00000498043 TENM3Q9P273 2699 aa12.45□□□□□ -0.42
CHRNA4-206ENST00000498043 TRAV26-1A0A087WT03 109 aa12.44□□□□□ -0.42
CHRNA4-206ENST00000498043 TEX48A0A1B0GUV7 120 aa12.44□□□□□ -0.42
CHRNA4-206ENST00000498043 UBE2L6O14933 153 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms