RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 KLK9Q9UKQ9 250 aa9.71□□□□□ -0.85
GAPVD1-220ENST00000497580 KIF25-AS1Q9Y6Z4 181 aa9.71□□□□□ -0.85
GAPVD1-220ENST00000497580 NXPH4O95158 308 aa9.71□□□□□ -0.86
GAPVD1-220ENST00000497580 DAZ2Q13117 558 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-220ENST00000497580 DAZ4Q86SG3 579 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-220ENST00000497580 DAZ1Q9NQZ3 744 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-220ENST00000497580 DAZ3Q9NR90 486 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-220ENST00000497580 IGHV4OR15-8A0A075B7B6 117 aa9.7□□□□□ -0.86
GAPVD1-220ENST00000497580 A0A087WW49 117 aa9.7□□□□□ -0.86
GAPVD1-220ENST00000497580 TMEM61Q8N0U2 210 aa9.7□□□□□ -0.86
GAPVD1-220ENST00000497580 C20orf203Q8NBC4 194 aa9.7□□□□□ -0.86
GAPVD1-220ENST00000497580 TRBV27A0A0K0K1C4 114 aa9.7□□□□□ -0.86
GAPVD1-220ENST00000497580 IGKV3D-7A0A0C4DH55 119 aa9.69□□□□□ -0.86
GAPVD1-220ENST00000497580 HOXD3P31249 432 aaPredicted RBP9.69□□□□□ -0.86
GAPVD1-220ENST00000497580 MIAQ16674 131 aa9.69□□□□□ -0.86
GAPVD1-220ENST00000497580 LINC00643Q86TS7 51 aa9.69□□□□□ -0.86
GAPVD1-220ENST00000497580 OR13C6PQ8NH95 151 aa9.69□□□□□ -0.86
GAPVD1-220ENST00000497580 KIR2DL5BQ8NHK3 375 aa9.69□□□□□ -0.86
GAPVD1-220ENST00000497580 ITLN2Q8WWU7 325 aaPredicted RBP9.69□□□□□ -0.86
GAPVD1-220ENST00000497580 LINC00526Q96FQ7 95 aa9.69□□□□□ -0.86
GAPVD1-220ENST00000497580 LITAFQ99732 161 aa9.69□□□□□ -0.86
GAPVD1-220ENST00000497580 LENEPQ9Y5L5 61 aa9.69□□□□□ -0.86
GAPVD1-220ENST00000497580 SDIM1Q6ZPB5 146 aa9.69□□□□□ -0.86
GAPVD1-220ENST00000497580 HRNRQ86YZ3 2850 aaPredicted RBP9.68□□□□□ -0.86
GAPVD1-220ENST00000497580 LY6EQ16553 131 aa9.68□□□□□ -0.86
GAPVD1-220ENST00000497580 ZFHX3Q15911 3703 aa9.68□□□□□ -0.86
GAPVD1-220ENST00000497580 BSNQ9UPA5 3926 aa9.68□□□□□ -0.86
GAPVD1-220ENST00000497580 IGHV1-69P01742 117 aa9.68□□□□□ -0.86
GAPVD1-220ENST00000497580 BAALC-AS2P0C853 105 aa9.68□□□□□ -0.86
GAPVD1-220ENST00000497580 DSCR8Q96T75 97 aa9.68□□□□□ -0.86
GAPVD1-220ENST00000497580 Q9HAA7 133 aa9.68□□□□□ -0.86
GAPVD1-220ENST00000497580 KNCNA6PVL3 124 aa9.67□□□□□ -0.86
GAPVD1-220ENST00000497580 COX7CP15954 63 aa9.67□□□□□ -0.86
GAPVD1-220ENST00000497580 ODF3BA8MYP8 253 aa9.67□□□□□ -0.86
GAPVD1-220ENST00000497580 PF4V1P10720 104 aa9.67□□□□□ -0.86
GAPVD1-220ENST00000497580 CYSTM1Q9H1C7 97 aa9.67□□□□□ -0.86
GAPVD1-220ENST00000497580 IGHV1-58A0A0C4DH39 117 aa9.66□□□□□ -0.86
GAPVD1-220ENST00000497580 M0QY20 66 aa9.66□□□□□ -0.86
GAPVD1-220ENST00000497580 LY6G5BQ8NDX9 201 aa9.66□□□□□ -0.86
GAPVD1-220ENST00000497580 TRBV7-1A0A0A6YYK4 115 aa9.66□□□□□ -0.86
GAPVD1-220ENST00000497580 TRACP01848 142 aa9.66□□□□□ -0.86
GAPVD1-220ENST00000497580 CDSNQ15517 529 aa9.66□□□□□ -0.86
GAPVD1-220ENST00000497580 A0A1B0GX51 115 aa9.66□□□□□ -0.86
GAPVD1-220ENST00000497580 ACYP1P07311 99 aa9.66□□□□□ -0.86
GAPVD1-220ENST00000497580 Q8N6K4 173 aa9.66□□□□□ -0.86
GAPVD1-220ENST00000497580 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.65□□□□□ -0.86
GAPVD1-220ENST00000497580 IGKV2-29A2NJV5 120 aaPredicted RBP9.65□□□□□ -0.86
GAPVD1-220ENST00000497580 IGFL3Q6UXB1 125 aa9.65□□□□□ -0.86
GAPVD1-220ENST00000497580 LRRC75A-AS1Q8N1F1 130 aa9.65□□□□□ -0.86
GAPVD1-220ENST00000497580 Q8NA96 180 aa9.65□□□□□ -0.86
GAPVD1-220ENST00000497580 IMUPQ9GZP8 106 aa9.65□□□□□ -0.86
GAPVD1-220ENST00000497580 JMJD1CQ15652 2540 aa9.65□□□□□ -0.86
GAPVD1-220ENST00000497580 MED14OSP0DP75 135 aa9.65□□□□□ -0.86
GAPVD1-220ENST00000497580 EDN2P20800 178 aa9.65□□□□□ -0.86
GAPVD1-220ENST00000497580 PROK1P58294 105 aa9.65□□□□□ -0.86
GAPVD1-220ENST00000497580 BRD3OSQ6XYD6 125 aa9.65□□□□□ -0.86
GAPVD1-220ENST00000497580 IGHV3-38A0A0C4DH36 116 aa9.65□□□□□ -0.87
GAPVD1-220ENST00000497580 RHPN1-AS1Q9BWJ2 59 aa9.65□□□□□ -0.87
GAPVD1-220ENST00000497580 A0A087WVE0 104 aa9.64□□□□□ -0.87
GAPVD1-220ENST00000497580 A0A0J9YX75 114 aa9.64□□□□□ -0.87
GAPVD1-220ENST00000497580 TIRAPP58753 221 aa9.64□□□□□ -0.87
GAPVD1-220ENST00000497580 MINOS1Q5TGZ0 78 aa9.64□□□□□ -0.87
GAPVD1-220ENST00000497580 RNF152Q8N8N0 203 aa9.64□□□□□ -0.87
GAPVD1-220ENST00000497580 PEMTQ9UBM1 199 aa9.64□□□□□ -0.87
GAPVD1-220ENST00000497580 HRCT1Q6UXD1 115 aa9.64□□□□□ -0.87
GAPVD1-220ENST00000497580 ABCA12Q86UK0 2595 aa9.64□□□□□ -0.87
GAPVD1-220ENST00000497580 CRYBG3Q68DQ2 2970 aa9.64□□□□□ -0.87
GAPVD1-220ENST00000497580 Q8N2B8 174 aa9.64□□□□□ -0.87
GAPVD1-220ENST00000497580 U3KQE9 123 aa9.64□□□□□ -0.87
GAPVD1-220ENST00000497580 VSIG2Q96IQ7 327 aa9.63□□□□□ -0.87
GAPVD1-220ENST00000497580 ZFP36P26651 326 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-220ENST00000497580 SAA4P35542 130 aa9.63□□□□□ -0.87
GAPVD1-220ENST00000497580 SPINK13Q1W4C9 94 aa9.63□□□□□ -0.87
GAPVD1-220ENST00000497580 DEFB121Q5J5C9 76 aa9.63□□□□□ -0.87
GAPVD1-220ENST00000497580 SPANXDQ9BXN6 97 aa9.63□□□□□ -0.87
GAPVD1-220ENST00000497580 SPANXCQ9NY87 97 aa9.63□□□□□ -0.87
GAPVD1-220ENST00000497580 CIRBPQ14011 172 aaKnown RBP9.62□□□□□ -0.87
GAPVD1-220ENST00000497580 DNAL4O96015 105 aa9.62□□□□□ -0.87
GAPVD1-220ENST00000497580 C4orf26Q17RF5 130 aa9.62□□□□□ -0.87
GAPVD1-220ENST00000497580 DCANP1Q8TF63 244 aa9.62□□□□□ -0.87
GAPVD1-220ENST00000497580 CITED2Q99967 270 aaPredicted RBP9.62□□□□□ -0.87
GAPVD1-220ENST00000497580 Q9H8V8 135 aa9.62□□□□□ -0.87
GAPVD1-220ENST00000497580 LRRK2Q5S007 2527 aa9.61□□□□□ -0.87
GAPVD1-220ENST00000497580 COX7A2LO14548 114 aa9.61□□□□□ -0.87
GAPVD1-220ENST00000497580 DGAT2L7PQ6IED9 249 aa9.61□□□□□ -0.87
GAPVD1-220ENST00000497580 CDKN2A-AS1Q9UH64 79 aa9.61□□□□□ -0.87
GAPVD1-220ENST00000497580 TRBV6-5A0A0K0K1A5 114 aa9.61□□□□□ -0.87
GAPVD1-220ENST00000497580 SYNJ2BPP57105 145 aa9.61□□□□□ -0.87
GAPVD1-220ENST00000497580 LINC01600Q96MT4 127 aa9.6□□□□□ -0.87
GAPVD1-220ENST00000497580 Q9UF83 564 aa9.6□□□□□ -0.87
GAPVD1-220ENST00000497580 ATOX1O00244 68 aa9.6□□□□□ -0.87
GAPVD1-220ENST00000497580 PRM2P04554 102 aa9.6□□□□□ -0.87
GAPVD1-220ENST00000497580 HIST1H4AP62805 103 aaKnown RBP9.6□□□□□ -0.87
GAPVD1-220ENST00000497580 LY6DQ14210 128 aa9.6□□□□□ -0.87
GAPVD1-220ENST00000497580 C14orf132Q9NPU4 83 aa9.6□□□□□ -0.87
GAPVD1-220ENST00000497580 SOCS3O14543 225 aa9.59□□□□□ -0.87
GAPVD1-220ENST00000497580 NAV2Q8IVL1 2488 aa9.59□□□□□ -0.87
GAPVD1-220ENST00000497580 IGHV3-16A0A0C4DH30 117 aa9.59□□□□□ -0.87
GAPVD1-220ENST00000497580 LINC00308Q8TCZ7 52 aa9.59□□□□□ -0.87
GAPVD1-220ENST00000497580 MRPS36P82909 103 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms