RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 DNAH9Q9NYC9 4486 aa3.66□□□□□ -1.82
CSMD3-208ENST00000497026 TRBV7-3A0A075B6L6 115 aa3.65□□□□□ -1.83
CSMD3-208ENST00000497026 PRAC2D3DTV9 90 aa3.65□□□□□ -1.83
CSMD3-208ENST00000497026 D6R8Y8 96 aa3.65□□□□□ -1.83
CSMD3-208ENST00000497026 OVOL1O14753 267 aa3.65□□□□□ -1.83
CSMD3-208ENST00000497026 NPYP01303 97 aa3.65□□□□□ -1.83
CSMD3-208ENST00000497026 ATP5G1P05496 136 aa3.65□□□□□ -1.83
CSMD3-208ENST00000497026 IFI27P40305 119 aaPredicted RBP3.65□□□□□ -1.83
CSMD3-208ENST00000497026 PRCDQ00LT1 54 aa3.65□□□□□ -1.83
CSMD3-208ENST00000497026 KLK9Q2XQG4 91 aa3.65□□□□□ -1.83
CSMD3-208ENST00000497026 FAM106AQ4KMX7 169 aa3.65□□□□□ -1.83
CSMD3-208ENST00000497026 C2orf83Q53S99 150 aa3.65□□□□□ -1.83
CSMD3-208ENST00000497026 C9orf66Q5T8R8 295 aa3.65□□□□□ -1.83
CSMD3-208ENST00000497026 ZNF493Q6ZR52 646 aa3.65□□□□□ -1.83
CSMD3-208ENST00000497026 SBSPONQ8IVN8 264 aa3.65□□□□□ -1.83
CSMD3-208ENST00000497026 OR1L8Q8NGR8 309 aa3.65□□□□□ -1.83
CSMD3-208ENST00000497026 MRAPQ8TCY5 172 aa3.65□□□□□ -1.83
CSMD3-208ENST00000497026 C18orf15Q96N68 181 aa3.65□□□□□ -1.83
CSMD3-208ENST00000497026 KLK9Q9UKQ9 250 aa3.65□□□□□ -1.83
CSMD3-208ENST00000497026 U3KQK5 164 aa3.65□□□□□ -1.83
CSMD3-208ENST00000497026 IGLV11-55A0A075B6I3 123 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 A0A096LNJ9 63 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 MYMXA0A1B0GTQ4 84 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 LOC389332A0A1B0GUA5 103 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 A4D1N5 150 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 FAM223BA6NKX1 122 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 H3BVH4 76 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 PRSS1P07477 247 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 MFAP4P55083 255 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 GNG5P63218 68 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 WT1-ASQ06250 92 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 C15orf32Q32M92 178 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 C9orf153Q5TBE3 101 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 ZC2HC1BQ5TFG8 222 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 NFE4Q86UQ8 179 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 FAM223AQ8IWN6 122 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 FXYD5Q96DB9 178 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 TMEM101Q96IK0 257 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 FAM167A-AS1Q96KT0 104 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 SLC25A39Q9BZJ4 359 aaPredicted RBP3.64□□□□□ -1.83
CSMD3-208ENST00000497026 PPDPFQ9H3Y8 114 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 OTORQ9NRC9 128 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 TMEM14BQ9NUH8 114 aa3.64□□□□□ -1.83
CSMD3-208ENST00000497026 IGKV2D-26A0A0A0MRZ7 120 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 TRAV2A0A0B4J234 112 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 PGPA6NDG6 321 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 H3BMM0 161 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 SLC25A20O43772 301 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 IGHV3-23P01764 117 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 TCRAP04437 139 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 ARMS2P0C7Q2 107 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 PYYP10082 97 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 EDN2P20800 178 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 CKS2P33552 79 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 EMP1P54849 157 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 SYNJ2BPP57105 145 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 UBE2D3P61077 147 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 HERVK_113P61574 105 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 UBE2D2P62837 147 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 ERHP84090 104 aaKnown RBP3.63□□□□□ -1.83
CSMD3-208ENST00000497026 FAM104BQ5XKR9 115 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 MORN3Q6PF18 240 aaPredicted RBP3.63□□□□□ -1.83
CSMD3-208ENST00000497026 GTSCR1Q86UQ5 136 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 C10orf126Q8N4M7 172 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 TMEM75Q8N9X5 138 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 UBE2WQ96B02 151 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 USMG5Q96IX5 58 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 CARD19Q96LW7 228 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 KIR2DL4Q99706 377 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 NDUFA4L2Q9NRX3 87 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 S4R3C0 116 aa3.63□□□□□ -1.83
CSMD3-208ENST00000497026 HUWE1Q7Z6Z7 4374 aaKnown RBP3.63□□□□□ -1.83
CSMD3-208ENST00000497026 SORL1Q92673 2214 aa3.62□□□□□ -1.83
CSMD3-208ENST00000497026 FAM240AA0A1B0GVK7 77 aa3.62□□□□□ -1.83
CSMD3-208ENST00000497026 LINC01546A6NGU7 62 aa3.62□□□□□ -1.83
CSMD3-208ENST00000497026 LINC01549A6NIU2 74 aa3.62□□□□□ -1.83
CSMD3-208ENST00000497026 IGLV1-51P01701 117 aa3.62□□□□□ -1.83
CSMD3-208ENST00000497026 RPL13AP40429 203 aaKnown RBP3.62□□□□□ -1.83
CSMD3-208ENST00000497026 UBE2D1P51668 147 aa3.62□□□□□ -1.83
CSMD3-208ENST00000497026 THAP8Q8NA92 274 aa3.62□□□□□ -1.83
CSMD3-208ENST00000497026 C15orf53Q8NAA6 179 aa3.62□□□□□ -1.83
CSMD3-208ENST00000497026 RASL10AQ92737 203 aa3.62□□□□□ -1.83
CSMD3-208ENST00000497026 SGK494Q96LW2 274 aa3.62□□□□□ -1.83
CSMD3-208ENST00000497026 SRSF8Q9BRL6 282 aaKnown RBP3.62□□□□□ -1.83
CSMD3-208ENST00000497026 PRADC1Q9BSG0 188 aa3.62□□□□□ -1.83
CSMD3-208ENST00000497026 IMUPQ9GZP8 106 aa3.62□□□□□ -1.83
CSMD3-208ENST00000497026 Q9H3A6 140 aa3.62□□□□□ -1.83
CSMD3-208ENST00000497026 ZNF256Q9Y2P7 627 aaPredicted RBP3.62□□□□□ -1.83
CSMD3-208ENST00000497026 TRAV8-1A0A0A6YYK1 113 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 TRAV12-1A0A0B4J245 112 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 TRAV4A0A0B4J268 109 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 TRBV7-7A0A0K0K1E9 115 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 C9JAW5 83 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 K7EIM0 57 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 UQCRQO14949 82 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 DUSP14O95147 198 aaKnown RBP3.61□□□□□ -1.83
CSMD3-208ENST00000497026 RNASE2P10153 161 aaKnown RBP3.61□□□□□ -1.83
CSMD3-208ENST00000497026 GP9P14770 177 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 ORM2P19652 201 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 HLA-DMBP28068 263 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms