RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 TMEM141Q96I45 108 aa0.52□□□□□ -2.33
VPS26A-208ENST00000497022 MRPL36Q9P0J6 103 aaKnown RBP0.52□□□□□ -2.33
VPS26A-208ENST00000497022 CEP162Q5TB80 1403 aa0.52□□□□□ -2.33
VPS26A-208ENST00000497022 PPIP5K1Q6PFW1 1433 aa0.52□□□□□ -2.33
VPS26A-208ENST00000497022 GAPVD1Q14C86 1478 aa0.52□□□□□ -2.33
VPS26A-208ENST00000497022 MAGI2Q86UL8 1455 aa0.52□□□□□ -2.33
VPS26A-208ENST00000497022 HMGXB3Q12766 1538 aa0.52□□□□□ -2.33
VPS26A-208ENST00000497022 DCAF1Q9Y4B6 1507 aa0.52□□□□□ -2.33
VPS26A-208ENST00000497022 BAZ1AQ9NRL2 1556 aaPredicted RBP0.52□□□□□ -2.33
VPS26A-208ENST00000497022 IQGAP3Q86VI3 1631 aa0.52□□□□□ -2.33
VPS26A-208ENST00000497022 MYO3AQ8NEV4 1616 aa0.52□□□□□ -2.33
VPS26A-208ENST00000497022 PPRC1Q5VV67 1664 aaKnown RBP0.52□□□□□ -2.33
VPS26A-208ENST00000497022 H3BQF6 201 aa0.51□□□□□ -2.33
VPS26A-208ENST00000497022 APOC4-APOC2K7ER74 178 aa0.51□□□□□ -2.33
VPS26A-208ENST00000497022 ABCC3O15438 1527 aa0.51□□□□□ -2.33
VPS26A-208ENST00000497022 YPEL1O60688 119 aa0.51□□□□□ -2.33
VPS26A-208ENST00000497022 APOC2P02655 101 aa0.51□□□□□ -2.33
VPS26A-208ENST00000497022 MRC1P22897 1456 aa0.51□□□□□ -2.33
VPS26A-208ENST00000497022 SNCAP37840 140 aa0.51□□□□□ -2.33
VPS26A-208ENST00000497022 RPL37AP61513 92 aaKnown RBP0.51□□□□□ -2.33
VPS26A-208ENST00000497022 UBA52P62987 128 aaKnown RBP0.51□□□□□ -2.33
VPS26A-208ENST00000497022 ABCA4P78363 2273 aa0.51□□□□□ -2.33
VPS26A-208ENST00000497022 LINC00575Q6W349 94 aa0.51□□□□□ -2.33
VPS26A-208ENST00000497022 Q6ZQY7 126 aa0.51□□□□□ -2.33
VPS26A-208ENST00000497022 GTF2H5Q6ZYL4 71 aa0.51□□□□□ -2.33
VPS26A-208ENST00000497022 COMMD6Q7Z4G1 85 aa0.51□□□□□ -2.33
VPS26A-208ENST00000497022 DEFB132Q7Z7B7 95 aa0.51□□□□□ -2.33
VPS26A-208ENST00000497022 SPTSSAQ969W0 71 aa0.51□□□□□ -2.33
VPS26A-208ENST00000497022 SPANXDQ9BXN6 97 aa0.51□□□□□ -2.33
VPS26A-208ENST00000497022 SAR1AQ9NR31 198 aa0.51□□□□□ -2.33
VPS26A-208ENST00000497022 ARHGEF12Q9NZN5 1544 aa0.51□□□□□ -2.33
VPS26A-208ENST00000497022 ALKQ9UM73 1620 aa0.51□□□□□ -2.33
VPS26A-208ENST00000497022 KNTC1P50748 2209 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 KIAA0100Q14667 2235 aaKnown RBP0.5□□□□□ -2.33
VPS26A-208ENST00000497022 MYH8P13535 1937 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 TANC1Q9C0D5 1861 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 PSME4Q14997 1843 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 LAMC1P11047 1609 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 SSC5DA1L4H1 1573 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 DIP2CQ9Y2E4 1556 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 EHBP1L1Q8N3D4 1523 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 ERVK-7P63135 1459 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 NAIPQ13075 1403 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 TRAV2A0A0B4J234 112 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 TCRBV3S1A0A5B6 114 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 HIGD1CA8MV81 97 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 CBLN1P23435 193 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 ASIPP42127 132 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 POLR2JP52435 117 aaKnown RBP0.5□□□□□ -2.33
VPS26A-208ENST00000497022 FXYD3Q14802 87 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 SPANXN1Q5VSR9 72 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 C5orf56Q8N8D9 126 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 Q96NJ1 140 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 CCL19Q99731 98 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 VAMP8Q9BV40 100 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 MRPL35Q9NZE8 188 aaKnown RBP0.5□□□□□ -2.33
VPS26A-208ENST00000497022 PPLO60437 1756 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 SUPT6HQ7KZ85 1726 aaKnown RBP0.5□□□□□ -2.33
VPS26A-208ENST00000497022 IFT172Q9UG01 1749 aa0.5□□□□□ -2.33
VPS26A-208ENST00000497022 KIF14Q15058 1648 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 ZMYM4Q5VZL5 1548 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 MED13LQ71F56 2210 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 CCDC88BA6NC98 1476 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 CCDC18Q5T9S5 1454 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 NLRP1Q9C000 1473 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 DAPK1P53355 1430 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 BLMP54132 1417 aaPredicted RBP0.49□□□□□ -2.33
VPS26A-208ENST00000497022 ANKRD17O75179 2603 aaKnown RBP0.49□□□□□ -2.33
VPS26A-208ENST00000497022 TRAV13-2A0A0B4J235 113 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 TRAV22A0A0B4J277 110 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 TRBV10-1A0A0K0K1A3 114 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 TRBV30A0A0K0K1B3 111 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 TRBV7-7A0A0K0K1E9 115 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 TRBV10-3A0A0K0K1G6 114 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 UBE2L5PA0A1B0GUS4 154 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 A0A1W2PPM0 123 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 H7BZZ5 65 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 K7EP34 96 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 GNGT2O14610 69 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 UBE2D3P61077 147 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 UBE2D2P62837 147 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 UBE2L3P68036 154 aaKnown RBP0.49□□□□□ -2.33
VPS26A-208ENST00000497022 XAF1Q6GPH4 301 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 SFTA2Q6UW10 78 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 Q86TA4 180 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 FAM223AQ8IWN6 122 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 SVBPQ8N300 66 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 PPDPFLQ8WWR9 84 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 DMAC1Q96GE9 116 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 LINC00208Q96KT6 92 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 ATG5Q9H1Y0 275 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 NDUFA4L2Q9NRX3 87 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 HIGD1BQ9P298 99 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 MAP2P11137 1827 aaKnown RBP0.49□□□□□ -2.33
VPS26A-208ENST00000497022 RGPD3A6NKT7 1758 aaPredicted RBP0.49□□□□□ -2.33
VPS26A-208ENST00000497022 RGPD4Q7Z3J3 1758 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 PRKDCP78527 4128 aaKnown RBP0.49□□□□□ -2.33
VPS26A-208ENST00000497022 MADDQ8WXG6 1647 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 ABCA8O94911 1581 aa0.49□□□□□ -2.33
VPS26A-208ENST00000497022 CEP170BQ9Y4F5 1589 aaPredicted RBP0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms