RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 PLXNB2O15031 1838 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 IGHV4-4A0A075B6R2 117 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 IGKV1-6A0A0C4DH72 117 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 TRBV7-4A0A0J9YYF1 115 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 A0A1B0GUT8 65 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 A8MU10 97 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 B4DSR2 109 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 D6R8Y8 96 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 IGHV3-48P01763 117 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 BGLAPP02818 100 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 TFF1P04155 84 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 IAPPP10997 89 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 COX6B1P14854 86 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 CD24P25063 80 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 FXYD7P58549 80 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 MOBPQ13875 183 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 SPANXN5Q5MJ07 72 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 C10orf128Q5T292 105 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 MUSTN1Q8IVN3 82 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 Q8N814 137 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 TMEM254Q8TBM7 123 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 DEC1Q9P2X7 70 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 DSCAMO60469 2012 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 ZNF462Q96JM2 2506 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 MYO7BQ6PIF6 2116 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 IGHV4OR15-8A0A075B7B6 117 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 TRBV6-8A0A0A6YYG3 113 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 A6NED7 52 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 C10orf142B7Z368 130 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 LY6G6DO95868 133 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 IGLV1-51P01701 117 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 ARMS2P0C7Q2 107 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 BAALC-AS2P0C853 105 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 CCL5P13501 91 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 FXYD4P59646 89 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 TFF3Q07654 80 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 B9D2Q9BPU9 175 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 KMT2BQ9UMN6 2715 aaPredicted RBP2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 HMGN4O00479 90 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 PSCAO43653 123 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 NDUFA3O95167 84 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 GAS8-AS1O95177 125 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 IGLV3-21P80748 117 aaPredicted RBP2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 Q6ZS52 159 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 Q8IYB0 196 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 LINC00846Q9NV44 126 aa2.13□□□□□ -2.07
SNRNP48-202ENST00000496946 CABIN1Q9Y6J0 2220 aa2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 A0A0J9YXY3 114 aa2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 LY6HO94772 140 aa2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 TRGV3P03979 118 aa2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 CCL3P10147 92 aa2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 RPL36AP83881 106 aaKnown RBP2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 C20orf203Q8NBC4 194 aa2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 FAM104AQ969W3 186 aa2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 KRTAP1-5Q9BYS1 174 aa2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 OCR1Q9BZK8 76 aa2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 DPM3Q9P2X0 92 aa2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 MDC1Q14676 2089 aaKnown RBP2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 COL11A1P12107 1806 aaPredicted RBP2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 ZNF318Q5VUA4 2279 aa2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 M0R135 149 aa2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 LINC01590Q5TEZ4 76 aa2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 CSNK1G2-AS1Q8NCQ2 148 aa2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 LINC01560Q8TB33 94 aa2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 CDC42SE2Q9NRR3 84 aa2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 DHRS4-AS1Q9P1J3 65 aa2.12□□□□□ -2.07
SNRNP48-202ENST00000496946 HEATR5BQ9P2D3 2071 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 IGKV6D-41A0A0C4DH26 115 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 I3L3M4 83 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 IGLV2-11P01706 119 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 IGHV3-13P01766 116 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 KRTAP24-1Q3LI83 254 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 C1orf134Q5TEV5 83 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 Q8N7P7 452 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 C1orf64Q8NEQ6 169 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 KIF25-AS1Q9Y6Z4 181 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 ZNF831Q5JPB2 1677 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 IGLV3-16A0A075B6K0 115 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 TRBV6-6A0A0A6YYG2 114 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 IGHV3-35A0A0C4DH35 117 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 PMS2P5A8MQ11 134 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 PRAC2D3DTV9 90 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 H3BSH0 61 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 M0R3E3 92 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 NTN3O00634 580 aaPredicted RBP2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 SOCS3O14543 225 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 CRPP02741 224 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 CMC4P56277 68 aaPredicted RBP2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 KRTAP5-1Q6L8H4 278 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 ENHOQ6UWT2 76 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 ZFAND2AQ8N6M9 145 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 CNEP1R1Q8N9A8 125 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 LINC00467Q9BRT7 94 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 ESPL1Q14674 2120 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 MUC4Q99102 2169 aa2.11□□□□□ -2.07
SNRNP48-202ENST00000496946 INTS1Q8N201 2190 aaKnown RBP2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 A0A087WW49 117 aa2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 IGHV3-74A0A0B4J1X5 117 aa2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 LOC101927531A0A1B0GV80 90 aa2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 M0R1W7 72 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms