RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 PIGBOS1A0A0B4J2F0 54 aa-0.04□□□□□ -2.42
CD46-218ENST00000496723 G3V318 75 aa-0.04□□□□□ -2.42
CD46-218ENST00000496723 SPINK8P0C7L1 97 aa-0.04□□□□□ -2.42
CD46-218ENST00000496723 NSD1Q96L73 2696 aaPredicted RBP-0.04□□□□□ -2.42
CD46-218ENST00000496723 IFT140Q96RY7 1462 aa-0.04□□□□□ -2.42
CD46-218ENST00000496723 CSMD3Q7Z407 3707 aa-0.04□□□□□ -2.42
CD46-218ENST00000496723 HMCN2Q8NDA2 5059 aa-0.05□□□□□ -2.42
CD46-218ENST00000496723 TNXBP22105 4242 aa-0.05□□□□□ -2.42
CD46-218ENST00000496723 LOC105371267A0A1B0GV96 52 aa-0.05□□□□□ -2.42
CD46-218ENST00000496723 CFDP00746 253 aaPredicted RBP-0.05□□□□□ -2.42
CD46-218ENST00000496723 COPS9Q8WXC6 57 aa-0.05□□□□□ -2.42
CD46-218ENST00000496723 CYP4F30PQ9H0H9 118 aa-0.05□□□□□ -2.42
CD46-218ENST00000496723 PRO0255Q9UI72 69 aa-0.05□□□□□ -2.42
CD46-218ENST00000496723 LINC00312Q9Y6C7 94 aa-0.05□□□□□ -2.42
CD46-218ENST00000496723 ZMYM4Q5VZL5 1548 aa-0.05□□□□□ -2.42
CD46-218ENST00000496723 DCHS2Q6V1P9 2916 aa-0.05□□□□□ -2.42
CD46-218ENST00000496723 PKD1L1Q8TDX9 2849 aa-0.05□□□□□ -2.42
CD46-218ENST00000496723 SBF2Q86WG5 1849 aa-0.06□□□□□ -2.42
CD46-218ENST00000496723 CHD6Q8TD26 2715 aa-0.06□□□□□ -2.42
CD46-218ENST00000496723 LRRC37A2A6NM11 1700 aa-0.06□□□□□ -2.42
CD46-218ENST00000496723 PHLPP1O60346 1717 aa-0.06□□□□□ -2.42
CD46-218ENST00000496723 ARAP2Q8WZ64 1704 aa-0.06□□□□□ -2.42
CD46-218ENST00000496723 C10orf142B7Z368 130 aa-0.06□□□□□ -2.42
CD46-218ENST00000496723 CFAP126Q5VTH2 177 aa-0.06□□□□□ -2.42
CD46-218ENST00000496723 SDF2Q99470 211 aa-0.06□□□□□ -2.42
CD46-218ENST00000496723 FLNAP21333 2647 aaKnown RBP-0.06□□□□□ -2.42
CD46-218ENST00000496723 PIEZO2Q9H5I5 2752 aa-0.06□□□□□ -2.42
CD46-218ENST00000496723 FOCADQ5VW36 1801 aa-0.07□□□□□ -2.42
CD46-218ENST00000496723 ARPC4P59998 168 aa-0.07□□□□□ -2.42
CD46-218ENST00000496723 AQP10Q96PS8 301 aa-0.07□□□□□ -2.42
CD46-218ENST00000496723 PDCD10Q9BUL8 212 aa-0.07□□□□□ -2.42
CD46-218ENST00000496723 R4GMQ9 66 aa-0.07□□□□□ -2.42
CD46-218ENST00000496723 CACNA1AO00555 2505 aa-0.07□□□□□ -2.42
CD46-218ENST00000496723 PTPN13Q12923 2485 aa-0.08□□□□□ -2.42
CD46-218ENST00000496723 FAT2Q9NYQ8 4349 aa-0.08□□□□□ -2.42
CD46-218ENST00000496723 SIX6O95475 246 aa-0.08□□□□□ -2.42
CD46-218ENST00000496723 CCL18P55774 89 aa-0.08□□□□□ -2.42
CD46-218ENST00000496723 NPVFQ9HCQ7 196 aa-0.08□□□□□ -2.42
CD46-218ENST00000496723 SCN3BQ9NY72 215 aa-0.08□□□□□ -2.42
CD46-218ENST00000496723 SPTBN1Q01082 2364 aaKnown RBP-0.08□□□□□ -2.42
CD46-218ENST00000496723 BICRAQ9NZM4 1560 aa-0.08□□□□□ -2.42
CD46-218ENST00000496723 BSNQ9UPA5 3926 aa-0.08□□□□□ -2.42
CD46-218ENST00000496723 ZANQ9Y493 2812 aa-0.08□□□□□ -2.42
CD46-218ENST00000496723 MAP1BP46821 2468 aaKnown RBP-0.08□□□□□ -2.42
CD46-218ENST00000496723 MAP1AP78559 2803 aaPredicted RBP-0.09□□□□□ -2.42
CD46-218ENST00000496723 CFTRP13569 1480 aa-0.09□□□□□ -2.42
CD46-218ENST00000496723 TENM2Q9NT68 2774 aa-0.09□□□□□ -2.42
CD46-218ENST00000496723 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.09□□□□□ -2.42
CD46-218ENST00000496723 TRAV13-2A0A0B4J235 113 aa-0.09□□□□□ -2.42
CD46-218ENST00000496723 TRAV22A0A0B4J277 110 aa-0.09□□□□□ -2.42
CD46-218ENST00000496723 M0R3E3 92 aa-0.09□□□□□ -2.42
CD46-218ENST00000496723 PPP1R17O96001 155 aa-0.09□□□□□ -2.42
CD46-218ENST00000496723 C12orf73Q69YU5 71 aa-0.09□□□□□ -2.42
CD46-218ENST00000496723 DPH3Q96FX2 82 aa-0.09□□□□□ -2.42
CD46-218ENST00000496723 VWFP04275 2813 aa-0.09□□□□□ -2.42
CD46-218ENST00000496723 ZNF236Q9UL36 1845 aa-0.09□□□□□ -2.42
CD46-218ENST00000496723 GVINP1Q7Z2Y8 2422 aa-0.09□□□□□ -2.42
CD46-218ENST00000496723 MRC1P22897 1456 aa-0.1□□□□□ -2.42
CD46-218ENST00000496723 HECTD4Q9Y4D8 3996 aa-0.1□□□□□ -2.42
CD46-218ENST00000496723 PSME4Q14997 1843 aa-0.1□□□□□ -2.43
CD46-218ENST00000496723 PPRC1Q5VV67 1664 aaKnown RBP-0.1□□□□□ -2.43
CD46-218ENST00000496723 SPAARA0A1B0GVQ0 90 aa-0.1□□□□□ -2.43
CD46-218ENST00000496723 S100A3P33764 101 aa-0.1□□□□□ -2.43
CD46-218ENST00000496723 SMIM4Q8WVI0 70 aa-0.1□□□□□ -2.43
CD46-218ENST00000496723 SPCS1Q9Y6A9 102 aa-0.1□□□□□ -2.43
CD46-218ENST00000496723 MYO7BQ6PIF6 2116 aa-0.1□□□□□ -2.43
CD46-218ENST00000496723 KIF21AQ7Z4S6 1674 aa-0.11□□□□□ -2.43
CD46-218ENST00000496723 HSPG2P98160 4391 aa-0.11□□□□□ -2.43
CD46-218ENST00000496723 USF3Q68DE3 2245 aa-0.11□□□□□ -2.43
CD46-218ENST00000496723 STAB1Q9NY15 2570 aa-0.11□□□□□ -2.43
CD46-218ENST00000496723 HCG22E2RYF7 251 aa-0.11□□□□□ -2.43
CD46-218ENST00000496723 HIST1H1DP16402 221 aaKnown RBP-0.11□□□□□ -2.43
CD46-218ENST00000496723 WFDC2Q14508 124 aa-0.11□□□□□ -2.43
CD46-218ENST00000496723 C10orf128Q5T292 105 aa-0.11□□□□□ -2.43
CD46-218ENST00000496723 LENEPQ9Y5L5 61 aa-0.11□□□□□ -2.43
CD46-218ENST00000496723 ATRQ13535 2644 aa-0.12□□□□□ -2.43
CD46-218ENST00000496723 LRP6O75581 1613 aa-0.12□□□□□ -2.43
CD46-218ENST00000496723 WNK1Q9H4A3 2382 aa-0.12□□□□□ -2.43
CD46-218ENST00000496723 CTXND1A0A1B0GTU2 59 aa-0.12□□□□□ -2.43
CD46-218ENST00000496723 FAM25AB3EWG3 89 aa-0.12□□□□□ -2.43
CD46-218ENST00000496723 FAM25CB3EWG5 89 aa-0.12□□□□□ -2.43
CD46-218ENST00000496723 FAM25GB3EWG6 89 aa-0.12□□□□□ -2.43
CD46-218ENST00000496723 RBM3P98179 157 aaKnown RBP-0.12□□□□□ -2.43
CD46-218ENST00000496723 ARL11Q969Q4 196 aa-0.12□□□□□ -2.43
CD46-218ENST00000496723 CSPG4Q6UVK1 2322 aa-0.12□□□□□ -2.43
CD46-218ENST00000496723 ERCC6L2Q5T890 1561 aa-0.12□□□□□ -2.43
CD46-218ENST00000496723 MYCBP2O75592 4640 aa-0.12□□□□□ -2.43
CD46-218ENST00000496723 PPIP5K1Q6PFW1 1433 aa-0.13□□□□□ -2.43
CD46-218ENST00000496723 PRKDCP78527 4128 aaKnown RBP-0.13□□□□□ -2.43
CD46-218ENST00000496723 M0R135 149 aa-0.13□□□□□ -2.43
CD46-218ENST00000496723 SPAG11BQ08648 103 aa-0.13□□□□□ -2.43
CD46-218ENST00000496723 DEFB109BQ30KR1 87 aa-0.13□□□□□ -2.43
CD46-218ENST00000496723 CCDC58Q4VC31 144 aa-0.13□□□□□ -2.43
CD46-218ENST00000496723 Q6AWC8 147 aa-0.13□□□□□ -2.43
CD46-218ENST00000496723 SPAG11AQ6PDA7 123 aa-0.13□□□□□ -2.43
CD46-218ENST00000496723 TTC9CQ8N5M4 171 aa-0.13□□□□□ -2.43
CD46-218ENST00000496723 AGPAT4-IT1Q9H0P7 198 aa-0.13□□□□□ -2.43
CD46-218ENST00000496723 RERGLQ9H628 205 aa-0.13□□□□□ -2.43
CD46-218ENST00000496723 SERP1Q9Y6X1 66 aa-0.13□□□□□ -2.43
CD46-218ENST00000496723 V9GYH0 126 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms