RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 RRN3P1Q2M238 152 aa4.63□□□□□ -1.67
SSBP1-213ENST00000496622 PRR26Q8N8Z3 221 aa4.63□□□□□ -1.67
SSBP1-213ENST00000496622 EEF1AKMT3Q96AZ1 226 aa4.63□□□□□ -1.67
SSBP1-213ENST00000496622 GNB1LQ9BYB4 327 aa4.63□□□□□ -1.67
SSBP1-213ENST00000496622 CYSTM1Q9H1C7 97 aa4.63□□□□□ -1.67
SSBP1-213ENST00000496622 NHP2Q9NX24 153 aaKnown RBP4.63□□□□□ -1.67
SSBP1-213ENST00000496622 TRRAPQ9Y4A5 3859 aa4.63□□□□□ -1.67
SSBP1-213ENST00000496622 TMSB15BA0A087X1C1 80 aa4.62□□□□□ -1.67
SSBP1-213ENST00000496622 TRAV26-2A0A0B4J265 109 aa4.62□□□□□ -1.67
SSBP1-213ENST00000496622 C9JCJ5 164 aa4.62□□□□□ -1.67
SSBP1-213ENST00000496622 VPREB1P12018 145 aa4.62□□□□□ -1.67
SSBP1-213ENST00000496622 ERCC8Q13216 396 aa4.62□□□□□ -1.67
SSBP1-213ENST00000496622 C8orf49Q96NF6 230 aa4.62□□□□□ -1.67
SSBP1-213ENST00000496622 ODF3Q96PU9 254 aa4.62□□□□□ -1.67
SSBP1-213ENST00000496622 AGPAT4-IT1Q9H0P7 198 aa4.62□□□□□ -1.67
SSBP1-213ENST00000496622 PKD1L1Q8TDX9 2849 aa4.62□□□□□ -1.67
SSBP1-213ENST00000496622 TRAV9-1A0A075B6T8 112 aa4.62□□□□□ -1.67
SSBP1-213ENST00000496622 TCL1BO95988 128 aa4.62□□□□□ -1.67
SSBP1-213ENST00000496622 COX7CP15954 63 aa4.62□□□□□ -1.67
SSBP1-213ENST00000496622 Q6YL49 198 aa4.62□□□□□ -1.67
SSBP1-213ENST00000496622 LINC00173Q6ZV60 143 aa4.62□□□□□ -1.67
SSBP1-213ENST00000496622 TMEM75Q8N9X5 138 aa4.62□□□□□ -1.67
SSBP1-213ENST00000496622 HIGD1BQ9P298 99 aa4.62□□□□□ -1.67
SSBP1-213ENST00000496622 TRGV11A0A075B6L2 103 aa4.61□□□□□ -1.67
SSBP1-213ENST00000496622 K7EMT4 169 aa4.61□□□□□ -1.67
SSBP1-213ENST00000496622 CRIP1P50238 77 aa4.61□□□□□ -1.67
SSBP1-213ENST00000496622 APOC4P55056 127 aa4.61□□□□□ -1.67
SSBP1-213ENST00000496622 SERTAD4-AS1Q5TG53 156 aa4.61□□□□□ -1.67
SSBP1-213ENST00000496622 CEMP1Q6PRD7 247 aaPredicted RBP4.61□□□□□ -1.67
SSBP1-213ENST00000496622 C16orf95Q9H693 158 aa4.61□□□□□ -1.67
SSBP1-213ENST00000496622 ESM1Q9NQ30 184 aa4.61□□□□□ -1.67
SSBP1-213ENST00000496622 TMEM14CQ9P0S9 112 aa4.61□□□□□ -1.67
SSBP1-213ENST00000496622 NBEAL2Q6ZNJ1 2754 aa4.61□□□□□ -1.67
SSBP1-213ENST00000496622 TRBV7-1A0A0A6YYK4 115 aa4.61□□□□□ -1.67
SSBP1-213ENST00000496622 F6UB75 175 aa4.61□□□□□ -1.67
SSBP1-213ENST00000496622 FSHBP01225 129 aa4.61□□□□□ -1.67
SSBP1-213ENST00000496622 HLA-DRB4P13762 266 aa4.61□□□□□ -1.67
SSBP1-213ENST00000496622 KRTAP1-1Q07627 177 aa4.61□□□□□ -1.67
SSBP1-213ENST00000496622 IL36BQ9NZH7 164 aa4.61□□□□□ -1.67
SSBP1-213ENST00000496622 HLA-DRB4X5D2U9 266 aa4.61□□□□□ -1.67
SSBP1-213ENST00000496622 TRAV2A0A0B4J234 112 aa4.6□□□□□ -1.67
SSBP1-213ENST00000496622 HIGD1CA8MV81 97 aa4.6□□□□□ -1.67
SSBP1-213ENST00000496622 LTAP01374 205 aa4.6□□□□□ -1.67
SSBP1-213ENST00000496622 PSMB8P28062 276 aa4.6□□□□□ -1.67
SSBP1-213ENST00000496622 CFHR3Q02985 330 aa4.6□□□□□ -1.67
SSBP1-213ENST00000496622 C9orf139Q6ZV77 190 aa4.6□□□□□ -1.67
SSBP1-213ENST00000496622 POM121L12Q8N7R1 296 aa4.6□□□□□ -1.67
SSBP1-213ENST00000496622 NUP35Q8NFH5 326 aa4.6□□□□□ -1.67
SSBP1-213ENST00000496622 ZNF702PQ9H963 129 aa4.6□□□□□ -1.67
SSBP1-213ENST00000496622 K7EMI3 77 aa4.6□□□□□ -1.67
SSBP1-213ENST00000496622 HOXD3P31249 432 aaPredicted RBP4.6□□□□□ -1.67
SSBP1-213ENST00000496622 ZNF80P51504 273 aaPredicted RBP4.6□□□□□ -1.67
SSBP1-213ENST00000496622 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.6□□□□□ -1.67
SSBP1-213ENST00000496622 Q86TA4 180 aa4.6□□□□□ -1.67
SSBP1-213ENST00000496622 AMN1Q8IY45 258 aa4.6□□□□□ -1.67
SSBP1-213ENST00000496622 C1orf158Q8N1D5 194 aa4.6□□□□□ -1.67
SSBP1-213ENST00000496622 WWC2-AS2Q96NR7 200 aa4.6□□□□□ -1.67
SSBP1-213ENST00000496622 METTL26Q96S19 204 aa4.6□□□□□ -1.67
SSBP1-213ENST00000496622 AAMDCQ9H7C9 122 aa4.6□□□□□ -1.67
SSBP1-213ENST00000496622 GATA1P15976 413 aaPredicted RBP4.59□□□□□ -1.67
SSBP1-213ENST00000496622 SYNJ2BPP57105 145 aa4.59□□□□□ -1.67
SSBP1-213ENST00000496622 DAZ2Q13117 558 aaKnown RBP4.59□□□□□ -1.67
SSBP1-213ENST00000496622 GDF5OSQ5U4N7 250 aa4.59□□□□□ -1.67
SSBP1-213ENST00000496622 DAZ4Q86SG3 579 aaKnown RBP4.59□□□□□ -1.67
SSBP1-213ENST00000496622 GPHB5Q86YW7 130 aa4.59□□□□□ -1.67
SSBP1-213ENST00000496622 PGLYRP4Q96LB8 373 aa4.59□□□□□ -1.67
SSBP1-213ENST00000496622 DAZ1Q9NQZ3 744 aaKnown RBP4.59□□□□□ -1.67
SSBP1-213ENST00000496622 DAZ3Q9NR90 486 aaKnown RBP4.59□□□□□ -1.67
SSBP1-213ENST00000496622 TRBV7-7A0A0K0K1E9 115 aa4.59□□□□□ -1.67
SSBP1-213ENST00000496622 FAM240AA0A1B0GVK7 77 aa4.59□□□□□ -1.67
SSBP1-213ENST00000496622 FAM223BA6NKX1 122 aa4.59□□□□□ -1.67
SSBP1-213ENST00000496622 A8MWV9 139 aa4.59□□□□□ -1.67
SSBP1-213ENST00000496622 IGKCP01834 107 aa4.59□□□□□ -1.67
SSBP1-213ENST00000496622 CRIP2P52943 208 aaPredicted RBP4.59□□□□□ -1.67
SSBP1-213ENST00000496622 MORN3Q6PF18 240 aaPredicted RBP4.59□□□□□ -1.67
SSBP1-213ENST00000496622 FAM223AQ8IWN6 122 aa4.59□□□□□ -1.67
SSBP1-213ENST00000496622 NEXN-AS1Q8NBZ9 246 aa4.59□□□□□ -1.67
SSBP1-213ENST00000496622 RHPN1-AS1Q9BWJ2 59 aa4.59□□□□□ -1.67
SSBP1-213ENST00000496622 OSTCQ9NRP0 149 aa4.59□□□□□ -1.67
SSBP1-213ENST00000496622 LEPROTL1O95214 131 aa4.59□□□□□ -1.68
SSBP1-213ENST00000496622 C12orf74Q32Q52 190 aa4.59□□□□□ -1.68
SSBP1-213ENST00000496622 CD164L2Q6UWJ8 174 aa4.59□□□□□ -1.68
SSBP1-213ENST00000496622 FMC1Q96HJ9 113 aa4.59□□□□□ -1.68
SSBP1-213ENST00000496622 DPH3P1Q9H4G8 78 aa4.59□□□□□ -1.68
SSBP1-213ENST00000496622 ZNF256Q9Y2P7 627 aaPredicted RBP4.59□□□□□ -1.68
SSBP1-213ENST00000496622 LY96Q9Y6Y9 160 aa4.59□□□□□ -1.68
SSBP1-213ENST00000496622 AGRNO00468 2067 aa4.58□□□□□ -1.68
SSBP1-213ENST00000496622 IGHV4OR15-8A0A075B7B6 117 aa4.58□□□□□ -1.68
SSBP1-213ENST00000496622 A0A087WW49 117 aa4.58□□□□□ -1.68
SSBP1-213ENST00000496622 USP17L23D6RBM5 183 aa4.58□□□□□ -1.68
SSBP1-213ENST00000496622 KLF5Q13887 457 aaPredicted RBP4.58□□□□□ -1.68
SSBP1-213ENST00000496622 SMIM27A0A1W2PRY6 76 aa4.58□□□□□ -1.68
SSBP1-213ENST00000496622 C19orf71A6NCJ1 209 aa4.58□□□□□ -1.68
SSBP1-213ENST00000496622 DNAJC9-AS1A6NH13 148 aa4.58□□□□□ -1.68
SSBP1-213ENST00000496622 IGKV3-20P01619 116 aa4.58□□□□□ -1.68
SSBP1-213ENST00000496622 PSMB2P49721 201 aa4.58□□□□□ -1.68
SSBP1-213ENST00000496622 KLK9Q2XQG4 91 aa4.58□□□□□ -1.68
SSBP1-213ENST00000496622 USMG5Q96IX5 58 aa4.58□□□□□ -1.68
SSBP1-213ENST00000496622 PRR25Q96S07 402 aa4.58□□□□□ -1.68
SSBP1-213ENST00000496622 KLK9Q9UKQ9 250 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms