RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 TWIST1Q15672 202 aa8.35□□□□□ -1.07
FN1-226ENST00000496542 C9orf62Q8N4C0 152 aa8.35□□□□□ -1.07
FN1-226ENST00000496542 C9orf163Q8N9P6 203 aa8.35□□□□□ -1.07
FN1-226ENST00000496542 PGLYRP4Q96LB8 373 aa8.35□□□□□ -1.07
FN1-226ENST00000496542 GFRA4Q9GZZ7 299 aa8.35□□□□□ -1.07
FN1-226ENST00000496542 RNASE7Q9H1E1 156 aaKnown RBP8.35□□□□□ -1.07
FN1-226ENST00000496542 RPP21Q9H633 154 aaKnown RBP8.35□□□□□ -1.07
FN1-226ENST00000496542 hDV102S1A0JD36 115 aa8.34□□□□□ -1.07
FN1-226ENST00000496542 TAGLN2P37802 199 aaKnown RBP8.34□□□□□ -1.07
FN1-226ENST00000496542 COTL1Q14019 142 aa8.34□□□□□ -1.07
FN1-226ENST00000496542 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.34□□□□□ -1.07
FN1-226ENST00000496542 FAT3Q8TDW7 4589 aa8.34□□□□□ -1.08
FN1-226ENST00000496542 TRAV8-4A0A0B4J246 113 aa8.33□□□□□ -1.08
FN1-226ENST00000496542 TRAV26-2A0A0B4J265 109 aa8.33□□□□□ -1.08
FN1-226ENST00000496542 A0A1B0GUV1 79 aa8.33□□□□□ -1.08
FN1-226ENST00000496542 K7EN84 100 aa8.33□□□□□ -1.08
FN1-226ENST00000496542 WDR73Q6P4I2 378 aa8.33□□□□□ -1.08
FN1-226ENST00000496542 CLRN3Q8NCR9 226 aa8.33□□□□□ -1.08
FN1-226ENST00000496542 PANO1I0J062 215 aa8.32□□□□□ -1.08
FN1-226ENST00000496542 GATD1Q8NB37 220 aa8.32□□□□□ -1.08
FN1-226ENST00000496542 OCC1Q8TAD7 63 aa8.32□□□□□ -1.08
FN1-226ENST00000496542 CNFNQ9BYD5 112 aa8.32□□□□□ -1.08
FN1-226ENST00000496542 IGKV3OR2-268A0A0C4DH90 116 aa8.31□□□□□ -1.08
FN1-226ENST00000496542 CNBPP62633 177 aaKnown RBP8.31□□□□□ -1.08
FN1-226ENST00000496542 SDIM1Q6ZPB5 146 aa8.31□□□□□ -1.08
FN1-226ENST00000496542 RPL39LQ96EH5 51 aaKnown RBP8.31□□□□□ -1.08
FN1-226ENST00000496542 AP5S1Q9NUS5 200 aa8.31□□□□□ -1.08
FN1-226ENST00000496542 OXTP01178 125 aa8.3□□□□□ -1.08
FN1-226ENST00000496542 FOXA3P55318 350 aaPredicted RBP8.3□□□□□ -1.08
FN1-226ENST00000496542 SMIM15Q7Z3B0 74 aa8.3□□□□□ -1.08
FN1-226ENST00000496542 GTSF1Q8WW33 167 aa8.3□□□□□ -1.08
FN1-226ENST00000496542 IGHV3-64A0A075B6Q5 118 aa8.29□□□□□ -1.08
FN1-226ENST00000496542 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.29□□□□□ -1.08
FN1-226ENST00000496542 GAGE12HA6NDE8 117 aa8.29□□□□□ -1.08
FN1-226ENST00000496542 LCE2BO14633 110 aa8.29□□□□□ -1.08
FN1-226ENST00000496542 GATCO43716 136 aaKnown RBP8.29□□□□□ -1.08
FN1-226ENST00000496542 CEBPGP53567 150 aa8.29□□□□□ -1.08
FN1-226ENST00000496542 AMMECR1LQ6DCA0 310 aa8.29□□□□□ -1.08
FN1-226ENST00000496542 ALKAL2Q6UX46 152 aa8.29□□□□□ -1.08
FN1-226ENST00000496542 Q6ZNX1 250 aa8.29□□□□□ -1.08
FN1-226ENST00000496542 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.28□□□□□ -1.08
FN1-226ENST00000496542 IGKV2-29A2NJV5 120 aaPredicted RBP8.28□□□□□ -1.08
FN1-226ENST00000496542 HNRNPA3P51991 378 aaKnown RBP8.28□□□□□ -1.08
FN1-226ENST00000496542 RNASEKQ6P5S7 137 aaKnown RBP8.28□□□□□ -1.08
FN1-226ENST00000496542 AKAP14Q86UN6 197 aa8.28□□□□□ -1.08
FN1-226ENST00000496542 hCG_2014768A0A024R1R8 64 aa8.27□□□□□ -1.09
FN1-226ENST00000496542 TMEM250H0YL14 139 aa8.27□□□□□ -1.09
FN1-226ENST00000496542 APCSP02743 223 aa8.27□□□□□ -1.09
FN1-226ENST00000496542 SLPIP03973 132 aa8.27□□□□□ -1.09
FN1-226ENST00000496542 CHTF8P0CG12 524 aa8.27□□□□□ -1.09
FN1-226ENST00000496542 BLOC1S1P78537 153 aa8.27□□□□□ -1.09
FN1-226ENST00000496542 C15orf56Q8N910 161 aa8.27□□□□□ -1.09
FN1-226ENST00000496542 DPH3Q96FX2 82 aa8.27□□□□□ -1.09
FN1-226ENST00000496542 SDHAF1A6NFY7 115 aa8.26□□□□□ -1.09
FN1-226ENST00000496542 A8MWL6 223 aa8.26□□□□□ -1.09
FN1-226ENST00000496542 NCR2O95944 276 aa8.26□□□□□ -1.09
FN1-226ENST00000496542 CIRBPQ14011 172 aaKnown RBP8.26□□□□□ -1.09
FN1-226ENST00000496542 HIGD2BQ4VC39 106 aa8.26□□□□□ -1.09
FN1-226ENST00000496542 CFAP161Q6P656 301 aa8.26□□□□□ -1.09
FN1-226ENST00000496542 TEX261Q6UWH6 196 aa8.26□□□□□ -1.09
FN1-226ENST00000496542 CHCHD10Q8WYQ3 142 aaPredicted RBP8.26□□□□□ -1.09
FN1-226ENST00000496542 HMCN2Q8NDA2 5059 aa8.25□□□□□ -1.09
FN1-226ENST00000496542 FGF6P10767 208 aa8.25□□□□□ -1.09
FN1-226ENST00000496542 SERTAD4-AS1Q5TG53 156 aa8.25□□□□□ -1.09
FN1-226ENST00000496542 FAM231DQ6ZW35 169 aa8.25□□□□□ -1.09
FN1-226ENST00000496542 BORCS7Q96B45 105 aa8.25□□□□□ -1.09
FN1-226ENST00000496542 A0A087WYN8 130 aa8.24□□□□□ -1.09
FN1-226ENST00000496542 PMCHP20382 165 aa8.24□□□□□ -1.09
FN1-226ENST00000496542 CT83Q5H943 113 aa8.24□□□□□ -1.09
FN1-226ENST00000496542 SPACA4Q8TDM5 124 aa8.24□□□□□ -1.09
FN1-226ENST00000496542 H7C423 109 aa8.23□□□□□ -1.09
FN1-226ENST00000496542 I3L3M4 83 aa8.23□□□□□ -1.09
FN1-226ENST00000496542 LYPD6BQ8NI32 183 aa8.23□□□□□ -1.09
FN1-226ENST00000496542 RNF185Q96GF1 192 aa8.23□□□□□ -1.09
FN1-226ENST00000496542 SMIM7Q9BQ49 75 aa8.23□□□□□ -1.09
FN1-226ENST00000496542 TMEM242Q9NWH2 141 aa8.23□□□□□ -1.09
FN1-226ENST00000496542 TRBV6-5A0A0K0K1A5 114 aa8.22□□□□□ -1.09
FN1-226ENST00000496542 GAS8-AS1O95177 125 aa8.22□□□□□ -1.09
FN1-226ENST00000496542 RPS10P46783 165 aaKnown RBP8.22□□□□□ -1.09
FN1-226ENST00000496542 COX6A2Q02221 97 aa8.22□□□□□ -1.09
FN1-226ENST00000496542 TMEM101Q96IK0 257 aa8.22□□□□□ -1.09
FN1-226ENST00000496542 BTF3L4Q96K17 158 aa8.22□□□□□ -1.09
FN1-226ENST00000496542 EIF5A2Q9GZV4 153 aaKnown RBP8.22□□□□□ -1.09
FN1-226ENST00000496542 ST20Q9HBF5 79 aa8.22□□□□□ -1.09
FN1-226ENST00000496542 IGKV2-24A0A0C4DH68 120 aa8.21□□□□□ -1.1
FN1-226ENST00000496542 A0A1B0GUT8 65 aa8.21□□□□□ -1.1
FN1-226ENST00000496542 FAM231BA6NCW3 169 aa8.21□□□□□ -1.1
FN1-226ENST00000496542 HIGD1CA8MV81 97 aa8.21□□□□□ -1.1
FN1-226ENST00000496542 TSHBP01222 138 aa8.21□□□□□ -1.1
FN1-226ENST00000496542 ZNF25P17030 456 aaPredicted RBP8.21□□□□□ -1.1
FN1-226ENST00000496542 XCL1P47992 114 aa8.21□□□□□ -1.1
FN1-226ENST00000496542 LINC01551Q86U37 167 aa8.21□□□□□ -1.1
FN1-226ENST00000496542 OR5A1Q8NGJ0 315 aa8.21□□□□□ -1.1
FN1-226ENST00000496542 TSKUQ8WUA8 353 aa8.21□□□□□ -1.1
FN1-226ENST00000496542 GVQW2A0A096LPI5 108 aaPredicted RBP8.2□□□□□ -1.1
FN1-226ENST00000496542 ZNF727A8MUV8 499 aa8.2□□□□□ -1.1
FN1-226ENST00000496542 FOXI1Q12951 378 aa8.2□□□□□ -1.1
FN1-226ENST00000496542 MAJINQ3KP22 176 aa8.2□□□□□ -1.1
FN1-226ENST00000496542 PRSS3P2Q8NHM4 247 aa8.2□□□□□ -1.1
FN1-226ENST00000496542 MRAP2Q96G30 205 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms