RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	PIK3CD-AS1	Q5SR53	167 aa		4.95	□□□□□ -1.62
NVL-223	ENST00000496393	KRTAP26-1	Q6PEX3	210 aa		4.95	□□□□□ -1.62
NVL-223	ENST00000496393	CBLN2	Q8IUK8	224 aa		4.95	□□□□□ -1.62
NVL-223	ENST00000496393	LINC00269	Q8N2A0	174 aa		4.95	□□□□□ -1.62
NVL-223	ENST00000496393	SPACA4	Q8TDM5	124 aa		4.95	□□□□□ -1.62
NVL-223	ENST00000496393	SFRP2	Q96HF1	295 aa		4.95	□□□□□ -1.62
NVL-223	ENST00000496393	LINC01600	Q96MT4	127 aa		4.95	□□□□□ -1.62
NVL-223	ENST00000496393	EPDR1	Q9UM22	224 aa		4.95	□□□□□ -1.62
NVL-223	ENST00000496393	PHLDA3	Q9Y5J5	127 aa		4.95	□□□□□ -1.62
NVL-223	ENST00000496393	ARL2-SNX15	V9GYD0	113 aa		4.95	□□□□□ -1.62
NVL-223	ENST00000496393	IGHV3-64	A0A075B6Q5	118 aa		4.94	□□□□□ -1.62
NVL-223	ENST00000496393	TRBV10-1	A0A0K0K1A3	114 aa		4.94	□□□□□ -1.62
NVL-223	ENST00000496393	FABP5P3	A8MUU1	101 aa		4.94	□□□□□ -1.62
NVL-223	ENST00000496393	SH2D1A	O60880	128 aa		4.94	□□□□□ -1.62
NVL-223	ENST00000496393	RBX1	P62877	108 aa		4.94	□□□□□ -1.62
NVL-223	ENST00000496393	PNRC1	Q12796	327 aa	Predicted RBP	4.94	□□□□□ -1.62
NVL-223	ENST00000496393	ZNF56	Q15929	161 aa		4.94	□□□□□ -1.62
NVL-223	ENST00000496393	SAPCD1	Q5SSQ6	148 aa		4.94	□□□□□ -1.62
NVL-223	ENST00000496393		Q86TA4	180 aa		4.94	□□□□□ -1.62
NVL-223	ENST00000496393	NEXN-AS1	Q8NBZ9	246 aa		4.94	□□□□□ -1.62
NVL-223	ENST00000496393	C7orf33	Q8WU49	177 aa		4.94	□□□□□ -1.62
NVL-223	ENST00000496393	GTSF1	Q8WW33	167 aa		4.94	□□□□□ -1.62
NVL-223	ENST00000496393	MBD3L1	Q8WWY6	194 aa		4.94	□□□□□ -1.62
NVL-223	ENST00000496393	HIST1H2BA	Q96A08	127 aa		4.94	□□□□□ -1.62
NVL-223	ENST00000496393	IGKV2-24	A0A0C4DH68	120 aa		4.93	□□□□□ -1.62
NVL-223	ENST00000496393	MUC21	A0A0G2JKD1	596 aa		4.93	□□□□□ -1.62
NVL-223	ENST00000496393	MB	P02144	154 aa		4.93	□□□□□ -1.62
NVL-223	ENST00000496393	SLPI	P03973	132 aa		4.93	□□□□□ -1.62
NVL-223	ENST00000496393	SRP19	P09132	144 aa	Known RBP	4.93	□□□□□ -1.62
NVL-223	ENST00000496393	STAG3L2	P0CL84	134 aa		4.93	□□□□□ -1.62
NVL-223	ENST00000496393	STAG3L3	P0CL85	134 aa		4.93	□□□□□ -1.62
NVL-223	ENST00000496393	RAB5A	P20339	215 aa		4.93	□□□□□ -1.62
NVL-223	ENST00000496393	CRIP1	P50238	77 aa		4.93	□□□□□ -1.62
NVL-223	ENST00000496393	AKR1D1	P51857	326 aa		4.93	□□□□□ -1.62
NVL-223	ENST00000496393	CNBP	P62633	177 aa	Known RBP	4.93	□□□□□ -1.62
NVL-223	ENST00000496393	PRR3	P79522	188 aa	Known RBP	4.93	□□□□□ -1.62
NVL-223	ENST00000496393	WDR73	Q6P4I2	378 aa		4.93	□□□□□ -1.62
NVL-223	ENST00000496393	ZFP82	Q8N141	532 aa		4.93	□□□□□ -1.62
NVL-223	ENST00000496393	SFT2D1	Q8WV19	159 aa		4.93	□□□□□ -1.62
NVL-223	ENST00000496393	RAB24	Q969Q5	203 aa		4.93	□□□□□ -1.62
NVL-223	ENST00000496393	KRTAP3-1	Q9BYR8	98 aa		4.93	□□□□□ -1.62
NVL-223	ENST00000496393		A0A0J9YXV3	536 aa		4.92	□□□□□ -1.62
NVL-223	ENST00000496393	C5orf52	A6NGY3	159 aa		4.92	□□□□□ -1.62
NVL-223	ENST00000496393		C9JQL5	133 aa		4.92	□□□□□ -1.62
NVL-223	ENST00000496393	SMIM6	P0DI80	62 aa		4.92	□□□□□ -1.62
NVL-223	ENST00000496393	UBE2G2	P60604	165 aa		4.92	□□□□□ -1.62
NVL-223	ENST00000496393	NTM-AS1	Q6ZSK4	140 aa		4.92	□□□□□ -1.62
NVL-223	ENST00000496393	OR10G8	Q8NGN5	311 aa		4.92	□□□□□ -1.62
NVL-223	ENST00000496393	RNF185	Q96GF1	192 aa		4.92	□□□□□ -1.62
NVL-223	ENST00000496393	C12orf57	Q99622	126 aa		4.92	□□□□□ -1.62
NVL-223	ENST00000496393	CTDSP1	Q9GZU7	261 aa		4.92	□□□□□ -1.62
NVL-223	ENST00000496393	PRR34	Q9NV39	138 aa		4.92	□□□□□ -1.62
NVL-223	ENST00000496393	TMEM242	Q9NWH2	141 aa		4.92	□□□□□ -1.62
NVL-223	ENST00000496393	PLAC8	Q9NZF1	115 aa		4.92	□□□□□ -1.62
NVL-223	ENST00000496393	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.91	□□□□□ -1.62
NVL-223	ENST00000496393	MUC21	A0A140T8X8	626 aa		4.91	□□□□□ -1.62
NVL-223	ENST00000496393	PEX7	O00628	323 aa		4.91	□□□□□ -1.62
NVL-223	ENST00000496393	RPL35	P42766	123 aa	Known RBP	4.91	□□□□□ -1.62
NVL-223	ENST00000496393	SST	P61278	116 aa		4.91	□□□□□ -1.62
NVL-223	ENST00000496393	COX6A2	Q02221	97 aa		4.91	□□□□□ -1.62
NVL-223	ENST00000496393	REG3A	Q06141	175 aa		4.91	□□□□□ -1.62
NVL-223	ENST00000496393	MAJIN	Q3KP22	176 aa		4.91	□□□□□ -1.62
NVL-223	ENST00000496393	BTF3L4	Q96K17	158 aa		4.91	□□□□□ -1.62
NVL-223	ENST00000496393	TMEM167B	Q9NRX6	74 aa		4.91	□□□□□ -1.62
NVL-223	ENST00000496393	VAX2	Q9UIW0	290 aa		4.91	□□□□□ -1.62
NVL-223	ENST00000496393		F5H697	171 aa		4.9	□□□□□ -1.63
NVL-223	ENST00000496393	CXorf1	O96002	111 aa		4.9	□□□□□ -1.63
NVL-223	ENST00000496393	BCL2	P10415	239 aa		4.9	□□□□□ -1.63
NVL-223	ENST00000496393	FHIT	P49789	147 aa		4.9	□□□□□ -1.63
NVL-223	ENST00000496393	KRTAP10-8	P60410	259 aa		4.9	□□□□□ -1.63
NVL-223	ENST00000496393	RAB4B	P61018	213 aa		4.9	□□□□□ -1.63
NVL-223	ENST00000496393	PKIA	P61925	76 aa		4.9	□□□□□ -1.63
NVL-223	ENST00000496393	SNRPE	P62304	92 aa	Known RBP	4.9	□□□□□ -1.63
NVL-223	ENST00000496393	DNLZ	Q5SXM8	178 aa		4.9	□□□□□ -1.63
NVL-223	ENST00000496393	FAM162B	Q5T6X4	162 aa		4.9	□□□□□ -1.63
NVL-223	ENST00000496393	OR10AG1	Q8NH19	301 aa		4.9	□□□□□ -1.63
NVL-223	ENST00000496393	DERL1	Q9BUN8	251 aa		4.9	□□□□□ -1.63
NVL-223	ENST00000496393	GFRA4	Q9GZZ7	299 aa		4.9	□□□□□ -1.63
NVL-223	ENST00000496393	MANBAL	Q9NQG1	85 aa		4.9	□□□□□ -1.63
NVL-223	ENST00000496393	TRBV25-1	A0A075B6N4	114 aa		4.89	□□□□□ -1.63
NVL-223	ENST00000496393	TRBV6-1	A0A0K0K1D8	114 aa		4.89	□□□□□ -1.63
NVL-223	ENST00000496393	CTXND1	A0A1B0GTU2	59 aa		4.89	□□□□□ -1.63
NVL-223	ENST00000496393	TMEM250	H0YL14	139 aa		4.89	□□□□□ -1.63
NVL-223	ENST00000496393	HIGD2B	Q4VC39	106 aa		4.89	□□□□□ -1.63
NVL-223	ENST00000496393	PRR27	Q6MZM9	219 aa		4.89	□□□□□ -1.63
NVL-223	ENST00000496393	REG3G	Q6UW15	175 aa		4.89	□□□□□ -1.63
NVL-223	ENST00000496393	STPG4	Q8N801	248 aa		4.89	□□□□□ -1.63
NVL-223	ENST00000496393	C20orf203	Q8NBC4	194 aa		4.89	□□□□□ -1.63
NVL-223	ENST00000496393	PRSS3P2	Q8NHM4	247 aa		4.89	□□□□□ -1.63
NVL-223	ENST00000496393	YPEL4	Q96NS1	127 aa		4.89	□□□□□ -1.63
NVL-223	ENST00000496393	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.89	□□□□□ -1.63
NVL-223	ENST00000496393	NAT8	Q9UHE5	227 aa		4.89	□□□□□ -1.63
NVL-223	ENST00000496393	IGLV4-60	A0A075B6I1	120 aa		4.88	□□□□□ -1.63
NVL-223	ENST00000496393		A0A1W2PRE2	83 aa		4.88	□□□□□ -1.63
NVL-223	ENST00000496393	MAP1LC3B2	A6NCE7	125 aa		4.88	□□□□□ -1.63
NVL-223	ENST00000496393	S100P	P25815	95 aa		4.88	□□□□□ -1.63
NVL-223	ENST00000496393	RPS10	P46783	165 aa	Known RBP	4.88	□□□□□ -1.63
NVL-223	ENST00000496393	CCL20	P78556	96 aa		4.88	□□□□□ -1.63
NVL-223	ENST00000496393	FABP9	Q0Z7S8	132 aa		4.88	□□□□□ -1.63
NVL-223	ENST00000496393	C15orf56	Q8N910	161 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms