RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 SLC35B3Q9H1N7 401 aa2.25□□□□□ -2.05
CCDC39-207ENST00000495817 NAA60Q9H7X0 242 aa2.25□□□□□ -2.05
CCDC39-207ENST00000495817 FKBP11Q9NYL4 201 aa2.25□□□□□ -2.05
CCDC39-207ENST00000495817 CSMD2Q7Z408 3487 aa2.25□□□□□ -2.05
CCDC39-207ENST00000495817 ANKRD17O75179 2603 aaKnown RBP2.25□□□□□ -2.05
CCDC39-207ENST00000495817 MYO18AQ92614 2054 aaKnown RBP2.24□□□□□ -2.05
CCDC39-207ENST00000495817 AKAP9Q99996 3911 aa2.24□□□□□ -2.05
CCDC39-207ENST00000495817 A0A1W2PRS3 328 aa2.24□□□□□ -2.05
CCDC39-207ENST00000495817 OR51F1A6NGY5 319 aa2.24□□□□□ -2.05
CCDC39-207ENST00000495817 PMP2P02689 132 aa2.24□□□□□ -2.05
CCDC39-207ENST00000495817 DEFA4P12838 97 aa2.24□□□□□ -2.05
CCDC39-207ENST00000495817 DYNLT1P63172 113 aa2.24□□□□□ -2.05
CCDC39-207ENST00000495817 FAM27BQ5VT28 67 aa2.24□□□□□ -2.05
CCDC39-207ENST00000495817 MIC13Q5XKP0 118 aa2.24□□□□□ -2.05
CCDC39-207ENST00000495817 PFN4Q8NHR9 129 aa2.24□□□□□ -2.05
CCDC39-207ENST00000495817 SCGB3A1Q96QR1 104 aa2.24□□□□□ -2.05
CCDC39-207ENST00000495817 PTPRQQ9UMZ3 2332 aa2.24□□□□□ -2.05
CCDC39-207ENST00000495817 FBN2P35556 2912 aa2.24□□□□□ -2.05
CCDC39-207ENST00000495817 EXPH5Q8NEV8 1989 aa2.23□□□□□ -2.05
CCDC39-207ENST00000495817 PIEZO2Q9H5I5 2752 aa2.23□□□□□ -2.05
CCDC39-207ENST00000495817 TRBV20-1A0A075B6N2 111 aa2.23□□□□□ -2.05
CCDC39-207ENST00000495817 TRBV10-2A0A0K0K1G8 114 aa2.23□□□□□ -2.05
CCDC39-207ENST00000495817 SMIM31A0A1B0GVY4 71 aa2.23□□□□□ -2.05
CCDC39-207ENST00000495817 MCRIP1C9JLW8 97 aa2.23□□□□□ -2.05
CCDC39-207ENST00000495817 MT-ATP8P03928 68 aa2.23□□□□□ -2.05
CCDC39-207ENST00000495817 CRYGAP11844 174 aa2.23□□□□□ -2.05
CCDC39-207ENST00000495817 IL7P13232 177 aa2.23□□□□□ -2.05
CCDC39-207ENST00000495817 FXYD2P54710 66 aa2.23□□□□□ -2.05
CCDC39-207ENST00000495817 SUPT4H1P63272 117 aaKnown RBP2.23□□□□□ -2.05
CCDC39-207ENST00000495817 CDK5R1Q15078 307 aa2.23□□□□□ -2.05
CCDC39-207ENST00000495817 Q56UQ5 140 aa2.23□□□□□ -2.05
CCDC39-207ENST00000495817 EIF5AL1Q6IS14 154 aaKnown RBP2.23□□□□□ -2.05
CCDC39-207ENST00000495817 Q6ZS92 163 aa2.23□□□□□ -2.05
CCDC39-207ENST00000495817 Q8N2B8 174 aa2.23□□□□□ -2.05
CCDC39-207ENST00000495817 LINC00526Q96FQ7 95 aa2.23□□□□□ -2.05
CCDC39-207ENST00000495817 DSCR8Q96T75 97 aa2.23□□□□□ -2.05
CCDC39-207ENST00000495817 BCL2L10Q9HD36 194 aa2.23□□□□□ -2.05
CCDC39-207ENST00000495817 NOP16Q9Y3C1 178 aaKnown RBP2.23□□□□□ -2.05
CCDC39-207ENST00000495817 SERP1Q9Y6X1 66 aa2.23□□□□□ -2.05
CCDC39-207ENST00000495817 TEP1Q99973 2627 aaKnown RBP2.23□□□□□ -2.05
CCDC39-207ENST00000495817 FLNCQ14315 2725 aa2.23□□□□□ -2.05
CCDC39-207ENST00000495817 OTOGQ6ZRI0 2925 aa2.22□□□□□ -2.05
CCDC39-207ENST00000495817 MYO9AB2RTY4 2548 aa2.22□□□□□ -2.05
CCDC39-207ENST00000495817 ACACAQ13085 2346 aa2.22□□□□□ -2.05
CCDC39-207ENST00000495817 C3orf85A0A1B0GTC6 90 aa2.22□□□□□ -2.05
CCDC39-207ENST00000495817 C19orf84I3L1E1 186 aa2.22□□□□□ -2.05
CCDC39-207ENST00000495817 APOC4-APOC2K7ER74 178 aa2.22□□□□□ -2.05
CCDC39-207ENST00000495817 ZNF737O75373 536 aa2.22□□□□□ -2.05
CCDC39-207ENST00000495817 APOC2P02655 101 aa2.22□□□□□ -2.05
CCDC39-207ENST00000495817 SHBGP04278 402 aa2.22□□□□□ -2.05
CCDC39-207ENST00000495817 IGLC1P0CG04 106 aa2.22□□□□□ -2.05
CCDC39-207ENST00000495817 PCBD1P61457 104 aa2.22□□□□□ -2.05
CCDC39-207ENST00000495817 Q6ZRN7 208 aaPredicted RBP2.22□□□□□ -2.05
CCDC39-207ENST00000495817 FP248Q71RG6 208 aaPredicted RBP2.22□□□□□ -2.05
CCDC39-207ENST00000495817 CLEC2BQ92478 149 aa2.22□□□□□ -2.05
CCDC39-207ENST00000495817 LINC00052Q96N35 136 aa2.22□□□□□ -2.05
CCDC39-207ENST00000495817 MCEEQ96PE7 176 aa2.22□□□□□ -2.05
CCDC39-207ENST00000495817 DPY30Q9C005 99 aa2.22□□□□□ -2.05
CCDC39-207ENST00000495817 LINC00312Q9Y6C7 94 aa2.22□□□□□ -2.05
CCDC39-207ENST00000495817 U3KQA8 63 aa2.22□□□□□ -2.05
CCDC39-207ENST00000495817 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.21□□□□□ -2.06
CCDC39-207ENST00000495817 A6NN06 94 aa2.21□□□□□ -2.06
CCDC39-207ENST00000495817 C10orf142B7Z368 130 aa2.21□□□□□ -2.06
CCDC39-207ENST00000495817 TMEM262E9PQX1 116 aa2.21□□□□□ -2.06
CCDC39-207ENST00000495817 M0R2P5 195 aa2.21□□□□□ -2.06
CCDC39-207ENST00000495817 TIMM17BO60830 172 aa2.21□□□□□ -2.06
CCDC39-207ENST00000495817 EDF1O60869 148 aaKnown RBP2.21□□□□□ -2.06
CCDC39-207ENST00000495817 SLC25A4P12235 298 aa2.21□□□□□ -2.06
CCDC39-207ENST00000495817 CCL4P13236 92 aa2.21□□□□□ -2.06
CCDC39-207ENST00000495817 FABP4P15090 132 aa2.21□□□□□ -2.06
CCDC39-207ENST00000495817 ZNF846Q147U1 533 aa2.21□□□□□ -2.06
CCDC39-207ENST00000495817 KHDC3LQ587J8 217 aa2.21□□□□□ -2.06
CCDC39-207ENST00000495817 C10orf111Q8N326 155 aa2.21□□□□□ -2.06
CCDC39-207ENST00000495817 FAM216BQ8N7L0 139 aa2.21□□□□□ -2.06
CCDC39-207ENST00000495817 C10orf105Q8TEF2 133 aa2.21□□□□□ -2.06
CCDC39-207ENST00000495817 AQP3Q92482 292 aa2.21□□□□□ -2.06
CCDC39-207ENST00000495817 DOCK10Q96BY6 2186 aa2.21□□□□□ -2.06
CCDC39-207ENST00000495817 SCN3AQ9NY46 2000 aa2.21□□□□□ -2.06
CCDC39-207ENST00000495817 LRBAP50851 2863 aa2.21□□□□□ -2.06
CCDC39-207ENST00000495817 NF1P21359 2839 aa2.21□□□□□ -2.06
CCDC39-207ENST00000495817 CELSR1Q9NYQ6 3014 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 URB1O60287 2271 aaKnown RBP2.2□□□□□ -2.06
CCDC39-207ENST00000495817 ADGRG4Q8IZF6 3080 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 ASXL3Q9C0F0 2248 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 TCRBV3S1A0A5B6 114 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 B4DSR2 109 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 SDCBPO00560 298 aaPredicted RBP2.2□□□□□ -2.06
CCDC39-207ENST00000495817 TRACP01848 142 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 RBP4P02753 201 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 TPT1P13693 172 aaKnown RBP2.2□□□□□ -2.06
CCDC39-207ENST00000495817 BLCAPP62952 87 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 CIRBPQ14011 172 aaKnown RBP2.2□□□□□ -2.06
CCDC39-207ENST00000495817 SPRNQ5BIV9 151 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 LINC01545Q5VT33 79 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 UNQ5815/PRO19632Q6UWF5 114 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 COA5Q86WW8 74 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 OR5AS1Q8N127 324 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 OR5AK2Q8NH90 309 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 CCL4L1Q8NHW4 92 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 COPS9Q8WXC6 57 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms