RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 C12orf57Q99622 126 aa17.21■□□□□ 0.34
PPP1R3F-205ENST00000495799 ZMAT4Q9H898 229 aa17.21■□□□□ 0.34
PPP1R3F-205ENST00000495799 PHLDA1Q8WV24 401 aaPredicted RBP17.2■□□□□ 0.34
PPP1R3F-205ENST00000495799 SCGB3A1Q96QR1 104 aa17.19■□□□□ 0.34
PPP1R3F-205ENST00000495799 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.17■□□□□ 0.34
PPP1R3F-205ENST00000495799 SPATA12Q7Z6I5 190 aa17.17■□□□□ 0.34
PPP1R3F-205ENST00000495799 IGHV3-38A0A0C4DH36 116 aa17.16■□□□□ 0.34
PPP1R3F-205ENST00000495799 A0A0J9YWU9 116 aa17.16■□□□□ 0.34
PPP1R3F-205ENST00000495799 PAX4O43316 350 aa17.16■□□□□ 0.34
PPP1R3F-205ENST00000495799 ERASQ7Z444 233 aa17.16■□□□□ 0.34
PPP1R3F-205ENST00000495799 C20orf203Q8NBC4 194 aa17.16■□□□□ 0.34
PPP1R3F-205ENST00000495799 TMEM97Q5BJF2 176 aa17.16■□□□□ 0.34
PPP1R3F-205ENST00000495799 DEFB104AQ8WTQ1 72 aa17.16■□□□□ 0.34
PPP1R3F-205ENST00000495799 F5H768 121 aa17.15■□□□□ 0.34
PPP1R3F-205ENST00000495799 GYPEP15421 78 aa17.15■□□□□ 0.34
PPP1R3F-205ENST00000495799 C12orf74Q32Q52 190 aa17.15■□□□□ 0.34
PPP1R3F-205ENST00000495799 Q6ZN92 141 aa17.15■□□□□ 0.34
PPP1R3F-205ENST00000495799 LOC100131303A0A0U1RQF7 123 aa17.14■□□□□ 0.33
PPP1R3F-205ENST00000495799 LINC00694P0DN24 101 aa17.14■□□□□ 0.33
PPP1R3F-205ENST00000495799 TMEM141Q96I45 108 aa17.14■□□□□ 0.33
PPP1R3F-205ENST00000495799 TIMM17AQ99595 171 aa17.14■□□□□ 0.33
PPP1R3F-205ENST00000495799 GTSF1LQ9H1H1 148 aa17.14■□□□□ 0.33
PPP1R3F-205ENST00000495799 H0Y8G0 127 aa17.13■□□□□ 0.33
PPP1R3F-205ENST00000495799 PRSS1P07477 247 aa17.13■□□□□ 0.33
PPP1R3F-205ENST00000495799 S100A12P80511 92 aa17.13■□□□□ 0.33
PPP1R3F-205ENST00000495799 Q8N976 141 aa17.13■□□□□ 0.33
PPP1R3F-205ENST00000495799 HTN3P15516 51 aa17.12■□□□□ 0.33
PPP1R3F-205ENST00000495799 RPL39P62891 51 aaKnown RBP17.11■□□□□ 0.33
PPP1R3F-205ENST00000495799 LINC01545Q5VT33 79 aa17.11■□□□□ 0.33
PPP1R3F-205ENST00000495799 LGALS9CQ6DKI2 356 aa17.11■□□□□ 0.33
PPP1R3F-205ENST00000495799 C11orf45Q8TAV5 145 aa17.11■□□□□ 0.33
PPP1R3F-205ENST00000495799 B9D2Q9BPU9 175 aa17.11■□□□□ 0.33
PPP1R3F-205ENST00000495799 CHCHD7Q9BUK0 85 aa17.11■□□□□ 0.33
PPP1R3F-205ENST00000495799 NBEAL2Q6ZNJ1 2754 aa17.11■□□□□ 0.33
PPP1R3F-205ENST00000495799 SMAGPQ0VAQ4 97 aa17.11■□□□□ 0.33
PPP1R3F-205ENST00000495799 ATP6V0E2Q8NHE4 81 aa17.1■□□□□ 0.33
PPP1R3F-205ENST00000495799 IGIPA6NJ69 53 aa17.09■□□□□ 0.33
PPP1R3F-205ENST00000495799 MGAM2Q2M2H8 2515 aa17.08■□□□□ 0.32
PPP1R3F-205ENST00000495799 TRAV26-1A0A087WT03 109 aa17.08■□□□□ 0.32
PPP1R3F-205ENST00000495799 NPSP0C0P6 89 aa17.08■□□□□ 0.32
PPP1R3F-205ENST00000495799 PAPPA-AS1Q5QFB9 102 aa17.08■□□□□ 0.32
PPP1R3F-205ENST00000495799 TEX43Q6ZNM6 134 aa17.08■□□□□ 0.32
PPP1R3F-205ENST00000495799 SH2D6Q7Z4S9 175 aa17.08■□□□□ 0.32
PPP1R3F-205ENST00000495799 PYGO1Q9Y3Y4 419 aa17.08■□□□□ 0.32
PPP1R3F-205ENST00000495799 NOTCH1P46531 2555 aa17.08■□□□□ 0.32
PPP1R3F-205ENST00000495799 TRBV25-1A0A075B6N4 114 aa17.07■□□□□ 0.32
PPP1R3F-205ENST00000495799 TRAV12-1A0A0B4J245 112 aa17.07■□□□□ 0.32
PPP1R3F-205ENST00000495799 VSIG2Q96IQ7 327 aa17.07■□□□□ 0.32
PPP1R3F-205ENST00000495799 SPANXA1Q9NS26 97 aa17.07■□□□□ 0.32
PPP1R3F-205ENST00000495799 A0A0J9YY99 117 aa17.06■□□□□ 0.32
PPP1R3F-205ENST00000495799 MRPL23Q16540 153 aaKnown RBP17.06■□□□□ 0.32
PPP1R3F-205ENST00000495799 CDPF1Q6NVV7 123 aa17.06■□□□□ 0.32
PPP1R3F-205ENST00000495799 Q6ZTC4 211 aa17.06■□□□□ 0.32
PPP1R3F-205ENST00000495799 TMEM243Q9BU79 118 aa17.06■□□□□ 0.32
PPP1R3F-205ENST00000495799 ICOSQ9Y6W8 199 aa17.06■□□□□ 0.32
PPP1R3F-205ENST00000495799 H3BNG1 76 aa17.05■□□□□ 0.32
PPP1R3F-205ENST00000495799 NTM-AS1Q6ZSK4 140 aa17.05■□□□□ 0.32
PPP1R3F-205ENST00000495799 BAALCQ8WXS3 180 aa17.05■□□□□ 0.32
PPP1R3F-205ENST00000495799 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.04■□□□□ 0.32
PPP1R3F-205ENST00000495799 A0A087WX48 190 aa17.04■□□□□ 0.32
PPP1R3F-205ENST00000495799 IGKV2-29A2NJV5 120 aaPredicted RBP17.04■□□□□ 0.32
PPP1R3F-205ENST00000495799 H7C423 109 aa17.04■□□□□ 0.32
PPP1R3F-205ENST00000495799 UBE2L6O14933 153 aa17.04■□□□□ 0.32
PPP1R3F-205ENST00000495799 VAMP8Q9BV40 100 aa17.04■□□□□ 0.32
PPP1R3F-205ENST00000495799 TIMM21Q9BVV7 248 aa17.04■□□□□ 0.32
PPP1R3F-205ENST00000495799 NBEAL1Q6ZS30 2694 aa17.03■□□□□ 0.32
PPP1R3F-205ENST00000495799 TRBV6-8A0A0A6YYG3 113 aa17.03■□□□□ 0.32
PPP1R3F-205ENST00000495799 NANOS2P60321 138 aaKnown RBP17.03■□□□□ 0.32
PPP1R3F-205ENST00000495799 ODF1Q14990 250 aa17.03■□□□□ 0.32
PPP1R3F-205ENST00000495799 UBE2D4Q9Y2X8 147 aa17.02■□□□□ 0.32
PPP1R3F-205ENST00000495799 NHLRC4P0CG21 123 aaPredicted RBP17.01■□□□□ 0.31
PPP1R3F-205ENST00000495799 PMVKQ15126 192 aa17.01■□□□□ 0.31
PPP1R3F-205ENST00000495799 DGAT2L7PQ6IED9 249 aa17.01■□□□□ 0.31
PPP1R3F-205ENST00000495799 ATOH7Q8N100 152 aa17■□□□□ 0.31
PPP1R3F-205ENST00000495799 PMCHL2Q9BQD1 86 aa17■□□□□ 0.31
PPP1R3F-205ENST00000495799 CHTOPQ9Y3Y2 248 aaKnown RBP17■□□□□ 0.31
PPP1R3F-205ENST00000495799 IGLV4-3A0A075B6K6 122 aa16.99■□□□□ 0.31
PPP1R3F-205ENST00000495799 DEFB131BA0A096LNP1 70 aa16.99■□□□□ 0.31
PPP1R3F-205ENST00000495799 HSBP1L1C9JCN9 74 aa16.99■□□□□ 0.31
PPP1R3F-205ENST00000495799 MRPL52Q86TS9 123 aaKnown RBP16.99■□□□□ 0.31
PPP1R3F-205ENST00000495799 TRAV9-2A0A087WT02 112 aa16.98■□□□□ 0.31
PPP1R3F-205ENST00000495799 TRAV10A0A0B4J240 114 aa16.98■□□□□ 0.31
PPP1R3F-205ENST00000495799 PRSS29PA6NIE9 313 aa16.98■□□□□ 0.31
PPP1R3F-205ENST00000495799 F8VRH5 84 aa16.98■□□□□ 0.31
PPP1R3F-205ENST00000495799 DPM2O94777 84 aa16.98■□□□□ 0.31
PPP1R3F-205ENST00000495799 VCX2Q9H322 139 aa16.98■□□□□ 0.31
PPP1R3F-205ENST00000495799 CSDC2Q9Y534 153 aaKnown RBP16.98■□□□□ 0.31
PPP1R3F-205ENST00000495799 FGF6P10767 208 aa16.97■□□□□ 0.31
PPP1R3F-205ENST00000495799 PLNP26678 52 aa16.97■□□□□ 0.31
PPP1R3F-205ENST00000495799 MRPS36P82909 103 aaKnown RBP16.97■□□□□ 0.31
PPP1R3F-205ENST00000495799 AMMECR1LQ6DCA0 310 aa16.97■□□□□ 0.31
PPP1R3F-205ENST00000495799 IGKCP01834 107 aa16.96■□□□□ 0.31
PPP1R3F-205ENST00000495799 ZNF25P17030 456 aaPredicted RBP16.96■□□□□ 0.31
PPP1R3F-205ENST00000495799 TMEM101Q96IK0 257 aa16.96■□□□□ 0.31
PPP1R3F-205ENST00000495799 CST9LQ9H4G1 147 aa16.96■□□□□ 0.31
PPP1R3F-205ENST00000495799 MRPL35Q9NZE8 188 aaKnown RBP16.96■□□□□ 0.31
PPP1R3F-205ENST00000495799 A0A096LPF7 62 aa16.96■□□□□ 0.3
PPP1R3F-205ENST00000495799 CHCHD5Q9BSY4 110 aa16.96■□□□□ 0.3
PPP1R3F-205ENST00000495799 DEFA6Q01524 100 aa16.95■□□□□ 0.3
PPP1R3F-205ENST00000495799 C2orf88Q9BSF0 95 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms