RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 MRPL51Q4U2R6 128 aaKnown RBP6.96□□□□□ -1.3
RAB11FIP3-211ENST00000495663 GTSF1LQ9H1H1 148 aa6.96□□□□□ -1.3
RAB11FIP3-211ENST00000495663 LINC00588Q9Y4M8 146 aa6.96□□□□□ -1.3
RAB11FIP3-211ENST00000495663 PPP1R17O96001 155 aa6.95□□□□□ -1.3
RAB11FIP3-211ENST00000495663 CKS2P33552 79 aa6.95□□□□□ -1.3
RAB11FIP3-211ENST00000495663 TIRAPP58753 221 aa6.95□□□□□ -1.3
RAB11FIP3-211ENST00000495663 ELOBQ15370 118 aa6.95□□□□□ -1.3
RAB11FIP3-211ENST00000495663 OR10J3Q5JRS4 329 aa6.95□□□□□ -1.3
RAB11FIP3-211ENST00000495663 DAZ4Q86SG3 579 aaKnown RBP6.95□□□□□ -1.3
RAB11FIP3-211ENST00000495663 DAZ3Q9NR90 486 aaKnown RBP6.95□□□□□ -1.3
RAB11FIP3-211ENST00000495663 SMCO4Q9NRQ5 59 aa6.95□□□□□ -1.3
RAB11FIP3-211ENST00000495663 MRPS16Q9Y3D3 137 aaKnown RBP6.95□□□□□ -1.3
RAB11FIP3-211ENST00000495663 TRBV24-1A0A075B6N3 115 aa6.94□□□□□ -1.3
RAB11FIP3-211ENST00000495663 TGIF2-C20orf24A0A0A6YYL0 155 aa6.94□□□□□ -1.3
RAB11FIP3-211ENST00000495663 LCE6AA0A183 80 aa6.94□□□□□ -1.3
RAB11FIP3-211ENST00000495663 SMKR1H3BMG3 65 aa6.94□□□□□ -1.3
RAB11FIP3-211ENST00000495663 NCR2O95944 276 aa6.94□□□□□ -1.3
RAB11FIP3-211ENST00000495663 HLA-DQA1P01909 254 aa6.94□□□□□ -1.3
RAB11FIP3-211ENST00000495663 PPBPP02775 128 aa6.94□□□□□ -1.3
RAB11FIP3-211ENST00000495663 TMEM136Q6ZRR5 245 aa6.94□□□□□ -1.3
RAB11FIP3-211ENST00000495663 RPL39LQ96EH5 51 aaKnown RBP6.94□□□□□ -1.3
RAB11FIP3-211ENST00000495663 UPK3BQ9BT76 320 aa6.94□□□□□ -1.3
RAB11FIP3-211ENST00000495663 GNB1LQ9BYB4 327 aa6.94□□□□□ -1.3
RAB11FIP3-211ENST00000495663 LYSTQ99698 3801 aa6.93□□□□□ -1.3
RAB11FIP3-211ENST00000495663 IGHV3-38A0A0C4DH36 116 aa6.93□□□□□ -1.3
RAB11FIP3-211ENST00000495663 TRBV6-5A0A0K0K1A5 114 aa6.93□□□□□ -1.3
RAB11FIP3-211ENST00000495663 D6R8Y8 96 aa6.93□□□□□ -1.3
RAB11FIP3-211ENST00000495663 GAS8-AS1O95177 125 aa6.93□□□□□ -1.3
RAB11FIP3-211ENST00000495663 MT-ND6P03923 174 aa6.93□□□□□ -1.3
RAB11FIP3-211ENST00000495663 TMEM97Q5BJF2 176 aa6.93□□□□□ -1.3
RAB11FIP3-211ENST00000495663 LELP1Q5T871 98 aa6.93□□□□□ -1.3
RAB11FIP3-211ENST00000495663 CBLN2Q8IUK8 224 aa6.93□□□□□ -1.3
RAB11FIP3-211ENST00000495663 ORMDL3Q8N138 153 aa6.93□□□□□ -1.3
RAB11FIP3-211ENST00000495663 ST20Q9HBF5 79 aa6.93□□□□□ -1.3
RAB11FIP3-211ENST00000495663 DNAH1Q9P2D7 4330 aa6.93□□□□□ -1.3
RAB11FIP3-211ENST00000495663 TRAV8-6A0A0B4J262 113 aa6.92□□□□□ -1.3
RAB11FIP3-211ENST00000495663 SDHAF1A6NFY7 115 aa6.92□□□□□ -1.3
RAB11FIP3-211ENST00000495663 S100A1P23297 94 aa6.92□□□□□ -1.3
RAB11FIP3-211ENST00000495663 RPS10P46783 165 aaKnown RBP6.92□□□□□ -1.3
RAB11FIP3-211ENST00000495663 NRACQ8N912 160 aa6.92□□□□□ -1.3
RAB11FIP3-211ENST00000495663 PHOX2AO14813 284 aa6.91□□□□□ -1.3
RAB11FIP3-211ENST00000495663 SIVA1O15304 175 aa6.91□□□□□ -1.3
RAB11FIP3-211ENST00000495663 ATP6V1G1O75348 118 aa6.91□□□□□ -1.3
RAB11FIP3-211ENST00000495663 TNFRSF6BO95407 300 aa6.91□□□□□ -1.3
RAB11FIP3-211ENST00000495663 APCSP02743 223 aa6.91□□□□□ -1.3
RAB11FIP3-211ENST00000495663 SUMO2P61956 95 aaKnown RBP6.91□□□□□ -1.3
RAB11FIP3-211ENST00000495663 PRELID3AQ96N28 172 aa6.91□□□□□ -1.3
RAB11FIP3-211ENST00000495663 YPEL4Q96NS1 127 aa6.91□□□□□ -1.3
RAB11FIP3-211ENST00000495663 TMEM70Q9BUB7 260 aa6.91□□□□□ -1.3
RAB11FIP3-211ENST00000495663 Q9H8V8 135 aa6.91□□□□□ -1.3
RAB11FIP3-211ENST00000495663 LAMTOR2Q9Y2Q5 125 aa6.91□□□□□ -1.3
RAB11FIP3-211ENST00000495663 ALMS1Q8TCU4 4167 aa6.91□□□□□ -1.3
RAB11FIP3-211ENST00000495663 TRBV25-1A0A075B6N4 114 aa6.9□□□□□ -1.3
RAB11FIP3-211ENST00000495663 TRBV6-8A0A0A6YYG3 113 aa6.9□□□□□ -1.3
RAB11FIP3-211ENST00000495663 I3L3M4 83 aa6.9□□□□□ -1.3
RAB11FIP3-211ENST00000495663 NPYP01303 97 aa6.9□□□□□ -1.3
RAB11FIP3-211ENST00000495663 PMCHP20382 165 aa6.9□□□□□ -1.3
RAB11FIP3-211ENST00000495663 POLR2KP53803 58 aaKnown RBP6.9□□□□□ -1.3
RAB11FIP3-211ENST00000495663 COTL1Q14019 142 aa6.9□□□□□ -1.3
RAB11FIP3-211ENST00000495663 WFDC10BQ8IUB3 73 aa6.9□□□□□ -1.3
RAB11FIP3-211ENST00000495663 C20orf78Q9BR46 151 aa6.9□□□□□ -1.3
RAB11FIP3-211ENST00000495663 IGHV1-24A0A0C4DH33 117 aa6.89□□□□□ -1.31
RAB11FIP3-211ENST00000495663 TRBV27A0A0K0K1C4 114 aa6.89□□□□□ -1.31
RAB11FIP3-211ENST00000495663 KRTAP29-1A8MX34 341 aaPredicted RBP6.89□□□□□ -1.31
RAB11FIP3-211ENST00000495663 VCYO14598 125 aa6.89□□□□□ -1.31
RAB11FIP3-211ENST00000495663 FABP9Q0Z7S8 132 aa6.89□□□□□ -1.31
RAB11FIP3-211ENST00000495663 KIAA1644Q3SXP7 199 aa6.89□□□□□ -1.31
RAB11FIP3-211ENST00000495663 NTM-AS1Q6ZSK4 140 aa6.89□□□□□ -1.31
RAB11FIP3-211ENST00000495663 TRAPPC1Q9Y5R8 145 aa6.89□□□□□ -1.31
RAB11FIP3-211ENST00000495663 VPS13DQ5THJ4 4388 aa6.88□□□□□ -1.31
RAB11FIP3-211ENST00000495663 IGLV2-18A0A075B6J9 118 aa6.88□□□□□ -1.31
RAB11FIP3-211ENST00000495663 AMTP48728 403 aa6.88□□□□□ -1.31
RAB11FIP3-211ENST00000495663 RPL32P62910 135 aaKnown RBP6.88□□□□□ -1.31
RAB11FIP3-211ENST00000495663 IQCJQ1A5X6 159 aa6.88□□□□□ -1.31
RAB11FIP3-211ENST00000495663 DEFB104AQ8WTQ1 72 aa6.88□□□□□ -1.31
RAB11FIP3-211ENST00000495663 KIR2DL4Q99706 377 aa6.88□□□□□ -1.31
RAB11FIP3-211ENST00000495663 CHCHD5Q9BSY4 110 aa6.88□□□□□ -1.31
RAB11FIP3-211ENST00000495663 SMIM2Q9BVW6 85 aa6.88□□□□□ -1.31
RAB11FIP3-211ENST00000495663 MAP1LC3AQ9H492 121 aa6.88□□□□□ -1.31
RAB11FIP3-211ENST00000495663 EPPK1P58107 5090 aaKnown RBP6.87□□□□□ -1.31
RAB11FIP3-211ENST00000495663 PRSS47A8MTI9 375 aa6.87□□□□□ -1.31
RAB11FIP3-211ENST00000495663 TCAPO15273 167 aa6.87□□□□□ -1.31
RAB11FIP3-211ENST00000495663 SCO1O75880 301 aa6.87□□□□□ -1.31
RAB11FIP3-211ENST00000495663 DNAH10OSP0CZ25 163 aa6.87□□□□□ -1.31
RAB11FIP3-211ENST00000495663 FCER1GP30273 86 aa6.87□□□□□ -1.31
RAB11FIP3-211ENST00000495663 PKIAP61925 76 aa6.87□□□□□ -1.31
RAB11FIP3-211ENST00000495663 TTC32Q5I0X7 151 aa6.87□□□□□ -1.31
RAB11FIP3-211ENST00000495663 TMEM243Q9BU79 118 aa6.87□□□□□ -1.31
RAB11FIP3-211ENST00000495663 TRAV9-2A0A087WT02 112 aa6.86□□□□□ -1.31
RAB11FIP3-211ENST00000495663 A0A087WX48 190 aa6.86□□□□□ -1.31
RAB11FIP3-211ENST00000495663 NBDYA0A0U1RRE5 68 aa6.86□□□□□ -1.31
RAB11FIP3-211ENST00000495663 LOC389332A0A1B0GUA5 103 aa6.86□□□□□ -1.31
RAB11FIP3-211ENST00000495663 TMEM262E9PQX1 116 aa6.86□□□□□ -1.31
RAB11FIP3-211ENST00000495663 K7EP13 123 aa6.86□□□□□ -1.31
RAB11FIP3-211ENST00000495663 UBE2L6O14933 153 aa6.86□□□□□ -1.31
RAB11FIP3-211ENST00000495663 TSHBP01222 138 aa6.86□□□□□ -1.31
RAB11FIP3-211ENST00000495663 LINC01556Q5JQF7 62 aa6.86□□□□□ -1.31
RAB11FIP3-211ENST00000495663 NIT1Q86X76 327 aa6.86□□□□□ -1.31
RAB11FIP3-211ENST00000495663 ALKBH7Q9BT30 221 aaPredicted RBP6.86□□□□□ -1.31
RAB11FIP3-211ENST00000495663 CHCHD7Q9BUK0 85 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms