RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 IGIPA6NJ69 53 aa11.68□□□□□ -0.54
CBX4-204ENST00000495122 TSHBP01222 138 aa11.68□□□□□ -0.54
CBX4-204ENST00000495122 AZU1P20160 251 aa11.68□□□□□ -0.54
CBX4-204ENST00000495122 RRN3P1Q2M238 152 aa11.68□□□□□ -0.54
CBX4-204ENST00000495122 BAALCQ8WXS3 180 aa11.68□□□□□ -0.54
CBX4-204ENST00000495122 OVOL2Q9BRP0 275 aa11.68□□□□□ -0.54
CBX4-204ENST00000495122 MRPL16Q9NX20 251 aaKnown RBP11.68□□□□□ -0.54
CBX4-204ENST00000495122 CHTOPQ9Y3Y2 248 aaKnown RBP11.68□□□□□ -0.54
CBX4-204ENST00000495122 EREGO14944 169 aa11.67□□□□□ -0.54
CBX4-204ENST00000495122 ANKRD39Q53RE8 183 aa11.67□□□□□ -0.54
CBX4-204ENST00000495122 BOD1L2Q8IYS8 172 aa11.67□□□□□ -0.54
CBX4-204ENST00000495122 C20orf203Q8NBC4 194 aa11.67□□□□□ -0.54
CBX4-204ENST00000495122 OR4C5Q8NGB2 326 aa11.67□□□□□ -0.54
CBX4-204ENST00000495122 MRPL35Q9NZE8 188 aaKnown RBP11.67□□□□□ -0.54
CBX4-204ENST00000495122 HHLA3Q9XRX5 114 aa11.67□□□□□ -0.54
CBX4-204ENST00000495122 PYGO1Q9Y3Y4 419 aa11.67□□□□□ -0.54
CBX4-204ENST00000495122 IGHV3OR16-12A0A075B7B8 117 aa11.66□□□□□ -0.54
CBX4-204ENST00000495122 TRGV1A0A0A0MS02 117 aa11.66□□□□□ -0.54
CBX4-204ENST00000495122 SMIM9A6NGZ8 99 aa11.66□□□□□ -0.54
CBX4-204ENST00000495122 RPL35AP18077 110 aaKnown RBP11.66□□□□□ -0.54
CBX4-204ENST00000495122 PMVKQ15126 192 aa11.66□□□□□ -0.54
CBX4-204ENST00000495122 KIR2DL5BQ8NHK3 375 aa11.66□□□□□ -0.54
CBX4-204ENST00000495122 COL5A1-AS1Q5SY13 56 aa11.65□□□□□ -0.54
CBX4-204ENST00000495122 NEGR1Q7Z3B1 354 aa11.65□□□□□ -0.54
CBX4-204ENST00000495122 WFDC10AQ9H1F0 79 aa11.65□□□□□ -0.54
CBX4-204ENST00000495122 DYNC2H1Q8NCM8 4307 aaKnown RBP11.65□□□□□ -0.54
CBX4-204ENST00000495122 FGF6P10767 208 aa11.64□□□□□ -0.55
CBX4-204ENST00000495122 NACAE9PAV3 2078 aa11.63□□□□□ -0.55
CBX4-204ENST00000495122 PRSS29PA6NIE9 313 aa11.63□□□□□ -0.55
CBX4-204ENST00000495122 SMAGPQ0VAQ4 97 aa11.63□□□□□ -0.55
CBX4-204ENST00000495122 ZC2HC1BQ5TFG8 222 aa11.63□□□□□ -0.55
CBX4-204ENST00000495122 SBSPONQ8IVN8 264 aa11.63□□□□□ -0.55
CBX4-204ENST00000495122 STPG4Q8N801 248 aa11.63□□□□□ -0.55
CBX4-204ENST00000495122 PLAC8L1A1L4L8 177 aa11.62□□□□□ -0.55
CBX4-204ENST00000495122 PRM2P04554 102 aa11.62□□□□□ -0.55
CBX4-204ENST00000495122 APOC4P55056 127 aa11.62□□□□□ -0.55
CBX4-204ENST00000495122 TMEM97Q5BJF2 176 aa11.62□□□□□ -0.55
CBX4-204ENST00000495122 SPANXA1Q9NS26 97 aa11.62□□□□□ -0.55
CBX4-204ENST00000495122 HIGD1BQ9P298 99 aa11.62□□□□□ -0.55
CBX4-204ENST00000495122 IGHV3-73A0A0B4J1V6 119 aa11.61□□□□□ -0.55
CBX4-204ENST00000495122 K7EQD1 137 aa11.61□□□□□ -0.55
CBX4-204ENST00000495122 P0DMU3 169 aa11.61□□□□□ -0.55
CBX4-204ENST00000495122 FAM231AP0DMU4 169 aa11.61□□□□□ -0.55
CBX4-204ENST00000495122 FAM231CP0DMU5 169 aa11.61□□□□□ -0.55
CBX4-204ENST00000495122 RPL36AP83881 106 aaKnown RBP11.61□□□□□ -0.55
CBX4-204ENST00000495122 COTL1Q14019 142 aa11.61□□□□□ -0.55
CBX4-204ENST00000495122 RPL36ALQ969Q0 106 aaKnown RBP11.61□□□□□ -0.55
CBX4-204ENST00000495122 CST9LQ9H4G1 147 aa11.61□□□□□ -0.55
CBX4-204ENST00000495122 HERVK_113P61574 105 aa11.6□□□□□ -0.55
CBX4-204ENST00000495122 RPL39P62891 51 aaKnown RBP11.6□□□□□ -0.55
CBX4-204ENST00000495122 Q6ZTI0 123 aa11.6□□□□□ -0.55
CBX4-204ENST00000495122 DAZ4Q86SG3 579 aaKnown RBP11.6□□□□□ -0.55
CBX4-204ENST00000495122 TIMM21Q9BVV7 248 aa11.6□□□□□ -0.55
CBX4-204ENST00000495122 NOP10Q9NPE3 64 aaKnown RBP11.6□□□□□ -0.55
CBX4-204ENST00000495122 DAZ3Q9NR90 486 aaKnown RBP11.6□□□□□ -0.55
CBX4-204ENST00000495122 TRBV7-3A0A075B6L6 115 aa11.59□□□□□ -0.55
CBX4-204ENST00000495122 TRBV6-4A0A1B0GX49 114 aa11.59□□□□□ -0.55
CBX4-204ENST00000495122 NMUP48645 174 aa11.59□□□□□ -0.55
CBX4-204ENST00000495122 Q6ZSN1 163 aa11.59□□□□□ -0.55
CBX4-204ENST00000495122 C2orf91Q6ZV80 131 aa11.59□□□□□ -0.55
CBX4-204ENST00000495122 NFE4Q86UQ8 179 aa11.59□□□□□ -0.55
CBX4-204ENST00000495122 LINC00612Q8N6U2 182 aa11.59□□□□□ -0.55
CBX4-204ENST00000495122 CSMD3Q7Z407 3707 aa11.59□□□□□ -0.55
CBX4-204ENST00000495122 C3orf84H3BNL1 204 aa11.58□□□□□ -0.56
CBX4-204ENST00000495122 LYSTQ99698 3801 aa11.58□□□□□ -0.56
CBX4-204ENST00000495122 TRGV2A0A075B6R0 118 aa11.57□□□□□ -0.56
CBX4-204ENST00000495122 C11orf86A6NJI1 115 aa11.57□□□□□ -0.56
CBX4-204ENST00000495122 A8MZ25 164 aa11.57□□□□□ -0.56
CBX4-204ENST00000495122 E9PLD3 99 aa11.57□□□□□ -0.56
CBX4-204ENST00000495122 IGHV4-30-4P0DP06 118 aa11.57□□□□□ -0.56
CBX4-204ENST00000495122 HSD52Q0P140 79 aa11.57□□□□□ -0.56
CBX4-204ENST00000495122 OR11H2Q8NH07 326 aa11.57□□□□□ -0.56
CBX4-204ENST00000495122 ZNF479Q96JC4 524 aa11.57□□□□□ -0.56
CBX4-204ENST00000495122 TM2D3Q9BRN9 247 aa11.57□□□□□ -0.56
CBX4-204ENST00000495122 IGLV4-69A0A075B6H9 119 aa11.56□□□□□ -0.56
CBX4-204ENST00000495122 IGLV4-3A0A075B6K6 122 aa11.56□□□□□ -0.56
CBX4-204ENST00000495122 SEC11AP67812 179 aa11.56□□□□□ -0.56
CBX4-204ENST00000495122 MRPS36P82909 103 aaKnown RBP11.56□□□□□ -0.56
CBX4-204ENST00000495122 BATFQ16520 125 aa11.56□□□□□ -0.56
CBX4-204ENST00000495122 MUC7Q8TAX7 377 aa11.56□□□□□ -0.56
CBX4-204ENST00000495122 CHCHD7Q9BUK0 85 aa11.56□□□□□ -0.56
CBX4-204ENST00000495122 VCX2Q9H322 139 aa11.56□□□□□ -0.56
CBX4-204ENST00000495122 STARD9Q9P2P6 4700 aa11.55□□□□□ -0.56
CBX4-204ENST00000495122 LYRM9A8MSI8 78 aa11.55□□□□□ -0.56
CBX4-204ENST00000495122 HINT1P49773 126 aaPredicted RBP11.55□□□□□ -0.56
CBX4-204ENST00000495122 UBE2D3P61077 147 aa11.55□□□□□ -0.56
CBX4-204ENST00000495122 UBE2D2P62837 147 aa11.55□□□□□ -0.56
CBX4-204ENST00000495122 BVES-AS1Q5T3Y7 98 aa11.55□□□□□ -0.56
CBX4-204ENST00000495122 AMELXQ99217 191 aa11.55□□□□□ -0.56
CBX4-204ENST00000495122 GTSF1LQ9H1H1 148 aa11.55□□□□□ -0.56
CBX4-204ENST00000495122 SACSQ9NZJ4 4579 aa11.55□□□□□ -0.56
CBX4-204ENST00000495122 A0A1B0GV90 55 aa11.54□□□□□ -0.56
CBX4-204ENST00000495122 GAGE12BA1L429 117 aa11.54□□□□□ -0.56
CBX4-204ENST00000495122 GAGE7O76087 117 aa11.54□□□□□ -0.56
CBX4-204ENST00000495122 GAGE12FP0CL80 117 aa11.54□□□□□ -0.56
CBX4-204ENST00000495122 GAGE12GP0CL81 117 aa11.54□□□□□ -0.56
CBX4-204ENST00000495122 GAGE12IP0CL82 117 aa11.54□□□□□ -0.56
CBX4-204ENST00000495122 TAL2Q16559 108 aa11.54□□□□□ -0.56
CBX4-204ENST00000495122 MPV17L2Q567V2 206 aa11.54□□□□□ -0.56
CBX4-204ENST00000495122 PCP2Q8IVA1 136 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms