RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 LINC00269Q8N2A0 174 aa11.67□□□□□ -0.54
HDAC4-211ENST00000494800 TMEM191AQ9H0A3 160 aa11.67□□□□□ -0.54
HDAC4-211ENST00000494800 DNAH5Q8TE73 4624 aa11.66□□□□□ -0.54
HDAC4-211ENST00000494800 NCR2O95944 276 aa11.66□□□□□ -0.54
HDAC4-211ENST00000494800 WFDC2Q14508 124 aa11.66□□□□□ -0.54
HDAC4-211ENST00000494800 Q8N1X5 172 aa11.66□□□□□ -0.54
HDAC4-211ENST00000494800 RPL39LQ96EH5 51 aaKnown RBP11.66□□□□□ -0.54
HDAC4-211ENST00000494800 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.65□□□□□ -0.54
HDAC4-211ENST00000494800 A0A1B0GUV1 79 aa11.65□□□□□ -0.54
HDAC4-211ENST00000494800 NUP35Q8NFH5 326 aa11.65□□□□□ -0.54
HDAC4-211ENST00000494800 PRR34Q9NV39 138 aa11.65□□□□□ -0.54
HDAC4-211ENST00000494800 HSPG2P98160 4391 aa11.65□□□□□ -0.55
HDAC4-211ENST00000494800 SDHAF1A6NFY7 115 aa11.64□□□□□ -0.55
HDAC4-211ENST00000494800 APCSP02743 223 aa11.64□□□□□ -0.55
HDAC4-211ENST00000494800 REG3AQ06141 175 aa11.64□□□□□ -0.55
HDAC4-211ENST00000494800 CLPSL2Q6UWE3 100 aa11.64□□□□□ -0.55
HDAC4-211ENST00000494800 MRAP2Q96G30 205 aa11.64□□□□□ -0.55
HDAC4-211ENST00000494800 TMEM70Q9BUB7 260 aa11.64□□□□□ -0.55
HDAC4-211ENST00000494800 TRBV6-5A0A0K0K1A5 114 aa11.63□□□□□ -0.55
HDAC4-211ENST00000494800 I3L3M4 83 aa11.63□□□□□ -0.55
HDAC4-211ENST00000494800 HLA-DQA1P01909 254 aa11.63□□□□□ -0.55
HDAC4-211ENST00000494800 PMCHP20382 165 aa11.63□□□□□ -0.55
HDAC4-211ENST00000494800 DEFB104AQ8WTQ1 72 aa11.63□□□□□ -0.55
HDAC4-211ENST00000494800 ST20Q9HBF5 79 aa11.63□□□□□ -0.55
HDAC4-211ENST00000494800 TRAV8-4A0A0B4J246 113 aa11.62□□□□□ -0.55
HDAC4-211ENST00000494800 PPP1R17O96001 155 aa11.62□□□□□ -0.55
HDAC4-211ENST00000494800 AMMECR1LQ6DCA0 310 aa11.62□□□□□ -0.55
HDAC4-211ENST00000494800 APOBP04114 4563 aaKnown RBP11.62□□□□□ -0.55
HDAC4-211ENST00000494800 PCLOQ9Y6V0 5065 aa11.61□□□□□ -0.55
HDAC4-211ENST00000494800 A0A1B0GW15 77 aa11.61□□□□□ -0.55
HDAC4-211ENST00000494800 SMIM27A0A1W2PRY6 76 aa11.61□□□□□ -0.55
HDAC4-211ENST00000494800 H7C423 109 aa11.61□□□□□ -0.55
HDAC4-211ENST00000494800 RAB4AP20338 218 aa11.61□□□□□ -0.55
HDAC4-211ENST00000494800 AMN1Q8IY45 258 aa11.61□□□□□ -0.55
HDAC4-211ENST00000494800 C20orf203Q8NBC4 194 aa11.61□□□□□ -0.55
HDAC4-211ENST00000494800 XGP55808 180 aa11.6□□□□□ -0.55
HDAC4-211ENST00000494800 IGLV4-60A0A075B6I1 120 aa11.59□□□□□ -0.55
HDAC4-211ENST00000494800 S100A8P05109 93 aa11.59□□□□□ -0.55
HDAC4-211ENST00000494800 RNF185Q96GF1 192 aa11.59□□□□□ -0.55
HDAC4-211ENST00000494800 IGLV10-54A0A075B6I4 117 aa11.58□□□□□ -0.56
HDAC4-211ENST00000494800 EPM2AB3EWF7 344 aa11.58□□□□□ -0.56
HDAC4-211ENST00000494800 USP17L23D6RBM5 183 aa11.58□□□□□ -0.56
HDAC4-211ENST00000494800 RNASEKQ6P5S7 137 aaKnown RBP11.58□□□□□ -0.56
HDAC4-211ENST00000494800 PPP1R2P9O14990 202 aa11.57□□□□□ -0.56
HDAC4-211ENST00000494800 ZNF25P17030 456 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-211ENST00000494800 CAMPP49913 170 aa11.57□□□□□ -0.56
HDAC4-211ENST00000494800 TMEM101Q96IK0 257 aa11.57□□□□□ -0.56
HDAC4-211ENST00000494800 BTF3L4Q96K17 158 aa11.57□□□□□ -0.56
HDAC4-211ENST00000494800 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-211ENST00000494800 IGKV2-29A2NJV5 120 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-211ENST00000494800 F8W036 122 aa11.56□□□□□ -0.56
HDAC4-211ENST00000494800 PNRC1Q12796 327 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-211ENST00000494800 KRTAP4-5Q9BYR2 181 aa11.56□□□□□ -0.56
HDAC4-211ENST00000494800 TRBV27A0A0K0K1C4 114 aa11.55□□□□□ -0.56
HDAC4-211ENST00000494800 VCYO14598 125 aa11.55□□□□□ -0.56
HDAC4-211ENST00000494800 GAS8-AS1O95177 125 aa11.55□□□□□ -0.56
HDAC4-211ENST00000494800 FGF6P10767 208 aa11.55□□□□□ -0.56
HDAC4-211ENST00000494800 FCER1GP30273 86 aa11.55□□□□□ -0.56
HDAC4-211ENST00000494800 RPS10P46783 165 aaKnown RBP11.55□□□□□ -0.56
HDAC4-211ENST00000494800 HBBP68871 147 aa11.55□□□□□ -0.56
HDAC4-211ENST00000494800 FAM104BQ5XKR9 115 aa11.55□□□□□ -0.56
HDAC4-211ENST00000494800 CLRN3Q8NCR9 226 aa11.55□□□□□ -0.56
HDAC4-211ENST00000494800 TMEM242Q9NWH2 141 aa11.55□□□□□ -0.56
HDAC4-211ENST00000494800 LINC00862A6NCI5 91 aa11.54□□□□□ -0.56
HDAC4-211ENST00000494800 TSHBP01222 138 aa11.54□□□□□ -0.56
HDAC4-211ENST00000494800 POLR2KP53803 58 aaKnown RBP11.54□□□□□ -0.56
HDAC4-211ENST00000494800 CLLU1Q5K131 121 aa11.54□□□□□ -0.56
HDAC4-211ENST00000494800 KIR2DL4Q99706 377 aa11.54□□□□□ -0.56
HDAC4-211ENST00000494800 KRTAP17-1Q9BYP8 105 aa11.54□□□□□ -0.56
HDAC4-211ENST00000494800 IGKV3OR2-268A0A0C4DH90 116 aa11.53□□□□□ -0.56
HDAC4-211ENST00000494800 SMKR1H3BMG3 65 aa11.53□□□□□ -0.56
HDAC4-211ENST00000494800 FAM229AH3BQW9 127 aa11.53□□□□□ -0.56
HDAC4-211ENST00000494800 CKS2P33552 79 aa11.53□□□□□ -0.56
HDAC4-211ENST00000494800 SUMO2P61956 95 aaKnown RBP11.53□□□□□ -0.56
HDAC4-211ENST00000494800 SMAGPQ0VAQ4 97 aa11.53□□□□□ -0.56
HDAC4-211ENST00000494800 MRPL51Q4U2R6 128 aaKnown RBP11.53□□□□□ -0.56
HDAC4-211ENST00000494800 DGAT2L7PQ6IED9 249 aa11.53□□□□□ -0.56
HDAC4-211ENST00000494800 MRPL54Q6P161 138 aaKnown RBP11.53□□□□□ -0.56
HDAC4-211ENST00000494800 KRTAP26-1Q6PEX3 210 aa11.53□□□□□ -0.56
HDAC4-211ENST00000494800 C7orf77A4D0Y5 90 aa11.52□□□□□ -0.57
HDAC4-211ENST00000494800 MT-ND4LP03901 98 aa11.52□□□□□ -0.57
HDAC4-211ENST00000494800 OR5A1Q8NGJ0 315 aa11.52□□□□□ -0.57
HDAC4-211ENST00000494800 PRSS1P07477 247 aa11.51□□□□□ -0.57
HDAC4-211ENST00000494800 ESDP10768 282 aa11.51□□□□□ -0.57
HDAC4-211ENST00000494800 HAMPP81172 84 aa11.51□□□□□ -0.57
HDAC4-211ENST00000494800 LINC01620Q4KN68 170 aa11.51□□□□□ -0.57
HDAC4-211ENST00000494800 Q5VSD8 79 aa11.51□□□□□ -0.57
HDAC4-211ENST00000494800 Q6ZSA8 131 aa11.51□□□□□ -0.57
HDAC4-211ENST00000494800 ATP5L2Q7Z4Y8 100 aa11.51□□□□□ -0.57
HDAC4-211ENST00000494800 NRACQ8N912 160 aa11.51□□□□□ -0.57
HDAC4-211ENST00000494800 ANAPC16Q96DE5 110 aa11.51□□□□□ -0.57
HDAC4-211ENST00000494800 C20orf78Q9BR46 151 aa11.51□□□□□ -0.57
HDAC4-211ENST00000494800 FAM30AQ9NZY2 134 aa11.51□□□□□ -0.57
HDAC4-211ENST00000494800 hDV102S1A0JD36 115 aa11.5□□□□□ -0.57
HDAC4-211ENST00000494800 TCAPO15273 167 aa11.5□□□□□ -0.57
HDAC4-211ENST00000494800 SMR3BP02814 79 aaPredicted RBP11.5□□□□□ -0.57
HDAC4-211ENST00000494800 CFAP161Q6P656 301 aa11.5□□□□□ -0.57
HDAC4-211ENST00000494800 AP5S1Q9NUS5 200 aa11.5□□□□□ -0.57
HDAC4-211ENST00000494800 ABCA13Q86UQ4 5058 aa11.5□□□□□ -0.57
HDAC4-211ENST00000494800 GAGE12HA6NDE8 117 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms