RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 TMEM223A0PJW6 202 aa8.15□□□□□ -1.11
CHMP3-209ENST00000494623 AZU1P20160 251 aa8.15□□□□□ -1.11
CHMP3-209ENST00000494623 C11orf72Q8NBR9 251 aa8.15□□□□□ -1.11
CHMP3-209ENST00000494623 IGHV3-38A0A0C4DH36 116 aa8.14□□□□□ -1.11
CHMP3-209ENST00000494623 CCL24O00175 119 aa8.14□□□□□ -1.11
CHMP3-209ENST00000494623 ZNF22P17026 224 aaPredicted RBP8.14□□□□□ -1.11
CHMP3-209ENST00000494623 ODF3L2Q3SX64 289 aa8.14□□□□□ -1.11
CHMP3-209ENST00000494623 SFTA2Q6UW10 78 aa8.14□□□□□ -1.11
CHMP3-209ENST00000494623 STHQ8IWL8 128 aa8.14□□□□□ -1.11
CHMP3-209ENST00000494623 FLNAP21333 2647 aaKnown RBP8.14□□□□□ -1.11
CHMP3-209ENST00000494623 SETD2Q9BYW2 2564 aaPredicted RBP8.14□□□□□ -1.11
CHMP3-209ENST00000494623 RHODO00212 210 aa8.14□□□□□ -1.11
CHMP3-209ENST00000494623 SPXQ9BT56 116 aa8.14□□□□□ -1.11
CHMP3-209ENST00000494623 EDA2RQ9HAV5 297 aa8.14□□□□□ -1.11
CHMP3-209ENST00000494623 G3V4G9 280 aa8.13□□□□□ -1.11
CHMP3-209ENST00000494623 WFDC2Q14508 124 aa8.13□□□□□ -1.11
CHMP3-209ENST00000494623 SHISA2Q6UWI4 295 aa8.13□□□□□ -1.11
CHMP3-209ENST00000494623 MTURNQ8N3F0 131 aa8.13□□□□□ -1.11
CHMP3-209ENST00000494623 SLC25A29Q8N8R3 303 aa8.13□□□□□ -1.11
CHMP3-209ENST00000494623 AMELXQ99217 191 aa8.13□□□□□ -1.11
CHMP3-209ENST00000494623 CITED2Q99967 270 aaPredicted RBP8.13□□□□□ -1.11
CHMP3-209ENST00000494623 LEPROTO15243 131 aa8.13□□□□□ -1.11
CHMP3-209ENST00000494623 TEX29Q8N6K0 151 aa8.13□□□□□ -1.11
CHMP3-209ENST00000494623 FAM104AQ969W3 186 aa8.13□□□□□ -1.11
CHMP3-209ENST00000494623 YAE1D1Q9NRH1 226 aa8.13□□□□□ -1.11
CHMP3-209ENST00000494623 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.12□□□□□ -1.11
CHMP3-209ENST00000494623 IGKV2-29A2NJV5 120 aaPredicted RBP8.12□□□□□ -1.11
CHMP3-209ENST00000494623 UBE2D1P51668 147 aa8.12□□□□□ -1.11
CHMP3-209ENST00000494623 IGHV3-30P01768 117 aa8.12□□□□□ -1.11
CHMP3-209ENST00000494623 IGHV3-30-5P0DP03 117 aa8.12□□□□□ -1.11
CHMP3-209ENST00000494623 PYGO1Q9Y3Y4 419 aa8.12□□□□□ -1.11
CHMP3-209ENST00000494623 TENM4Q6N022 2769 aa8.12□□□□□ -1.11
CHMP3-209ENST00000494623 LOC107984156A0A0G2JMH3 177 aa8.11□□□□□ -1.11
CHMP3-209ENST00000494623 NACAE9PAV3 2078 aa8.11□□□□□ -1.11
CHMP3-209ENST00000494623 F8W1H4 67 aa8.11□□□□□ -1.11
CHMP3-209ENST00000494623 PIK3CD-AS1Q5SR53 167 aa8.11□□□□□ -1.11
CHMP3-209ENST00000494623 ARL17AQ8IVW1 177 aa8.11□□□□□ -1.11
CHMP3-209ENST00000494623 PTH2Q96A98 100 aa8.11□□□□□ -1.11
CHMP3-209ENST00000494623 CHCHD7Q9BUK0 85 aa8.11□□□□□ -1.11
CHMP3-209ENST00000494623 TRAV25A0A0B4J276 109 aa8.11□□□□□ -1.11
CHMP3-209ENST00000494623 TEX48A0A1B0GUV7 120 aa8.11□□□□□ -1.11
CHMP3-209ENST00000494623 IGHV3-53P01767 116 aa8.11□□□□□ -1.11
CHMP3-209ENST00000494623 BEAN1Q3B7T3 259 aa8.11□□□□□ -1.11
CHMP3-209ENST00000494623 C1orf158Q8N1D5 194 aa8.11□□□□□ -1.11
CHMP3-209ENST00000494623 LINC00467Q9BRT7 94 aa8.11□□□□□ -1.11
CHMP3-209ENST00000494623 SPANXB1Q9NS25 103 aaPredicted RBP8.11□□□□□ -1.11
CHMP3-209ENST00000494623 ACANP16112 2415 aa8.11□□□□□ -1.11
CHMP3-209ENST00000494623 RS1O15537 224 aa8.1□□□□□ -1.11
CHMP3-209ENST00000494623 FHL3Q13643 280 aa8.1□□□□□ -1.11
CHMP3-209ENST00000494623 GAGE13Q4V321 117 aa8.1□□□□□ -1.11
CHMP3-209ENST00000494623 NDUFA11Q86Y39 141 aa8.1□□□□□ -1.11
CHMP3-209ENST00000494623 TRGV1A0A0A0MS02 117 aa8.1□□□□□ -1.11
CHMP3-209ENST00000494623 ADARB2-AS1A8MUL3 147 aa8.1□□□□□ -1.11
CHMP3-209ENST00000494623 TSPAN13O95857 204 aa8.1□□□□□ -1.11
CHMP3-209ENST00000494623 CFC1BP0CG36 223 aa8.1□□□□□ -1.11
CHMP3-209ENST00000494623 CFC1P0CG37 223 aa8.1□□□□□ -1.11
CHMP3-209ENST00000494623 TRAV8-3A0A0A6YYJ7 113 aa8.09□□□□□ -1.11
CHMP3-209ENST00000494623 LINC01006Q8NI28 216 aa8.09□□□□□ -1.11
CHMP3-209ENST00000494623 UBE2D4Q9Y2X8 147 aa8.09□□□□□ -1.11
CHMP3-209ENST00000494623 NOTCH3Q9UM47 2321 aa8.09□□□□□ -1.11
CHMP3-209ENST00000494623 MRPS36P82909 103 aaKnown RBP8.09□□□□□ -1.11
CHMP3-209ENST00000494623 SH2D6Q7Z4S9 175 aa8.09□□□□□ -1.11
CHMP3-209ENST00000494623 DNAJC30Q96LL9 226 aa8.09□□□□□ -1.11
CHMP3-209ENST00000494623 NIPBLQ6KC79 2804 aaeCLIP8.09□□□□□ -1.11
CHMP3-209ENST00000494623 IGHV3-30-3P0DP02 117 aa8.09□□□□□ -1.12
CHMP3-209ENST00000494623 PSMB2P49721 201 aa8.09□□□□□ -1.12
CHMP3-209ENST00000494623 CRYBA4P53673 196 aa8.09□□□□□ -1.12
CHMP3-209ENST00000494623 TIMM21Q9BVV7 248 aa8.09□□□□□ -1.12
CHMP3-209ENST00000494623 TSSC4Q9Y5U2 329 aaPredicted RBP8.09□□□□□ -1.12
CHMP3-209ENST00000494623 A0A1B0GV72 72 aa8.08□□□□□ -1.12
CHMP3-209ENST00000494623 ETDBQ3ZM63 59 aa8.08□□□□□ -1.12
CHMP3-209ENST00000494623 TRAV26-1A0A087WT03 109 aa8.08□□□□□ -1.12
CHMP3-209ENST00000494623 KRTAP1-1Q07627 177 aa8.08□□□□□ -1.12
CHMP3-209ENST00000494623 Q6ZUT4 128 aa8.08□□□□□ -1.12
CHMP3-209ENST00000494623 MUSTN1Q8IVN3 82 aa8.08□□□□□ -1.12
CHMP3-209ENST00000494623 C10orf126Q8N4M7 172 aa8.08□□□□□ -1.12
CHMP3-209ENST00000494623 A4D1N5 150 aa8.07□□□□□ -1.12
CHMP3-209ENST00000494623 SPANXA1Q9NS26 97 aa8.07□□□□□ -1.12
CHMP3-209ENST00000494623 MTORP42345 2549 aa8.07□□□□□ -1.12
CHMP3-209ENST00000494623 A0A0J9YXY3 114 aa8.07□□□□□ -1.12
CHMP3-209ENST00000494623 A8MZ25 164 aa8.07□□□□□ -1.12
CHMP3-209ENST00000494623 Q6ZTI0 123 aa8.07□□□□□ -1.12
CHMP3-209ENST00000494623 WFDC10AQ9H1F0 79 aa8.07□□□□□ -1.12
CHMP3-209ENST00000494623 PRO0461Q9UI25 63 aa8.07□□□□□ -1.12
CHMP3-209ENST00000494623 PDZD2O15018 2839 aa8.06□□□□□ -1.12
CHMP3-209ENST00000494623 SPINK8P0C7L1 97 aa8.06□□□□□ -1.12
CHMP3-209ENST00000494623 DGAT2L7PQ6IED9 249 aa8.06□□□□□ -1.12
CHMP3-209ENST00000494623 PRO1854Q9UHT4 67 aa8.06□□□□□ -1.12
CHMP3-209ENST00000494623 IGHV1-58A0A0C4DH39 117 aa8.05□□□□□ -1.12
CHMP3-209ENST00000494623 TINCRA0A1B0GVN0 87 aa8.05□□□□□ -1.12
CHMP3-209ENST00000494623 H7C2G1 150 aa8.05□□□□□ -1.12
CHMP3-209ENST00000494623 SCGB1C2P0DMR2 95 aa8.05□□□□□ -1.12
CHMP3-209ENST00000494623 RPL35AP18077 110 aaKnown RBP8.05□□□□□ -1.12
CHMP3-209ENST00000494623 GEMIN7Q9H840 131 aaKnown RBP8.05□□□□□ -1.12
CHMP3-209ENST00000494623 NOP10Q9NPE3 64 aaKnown RBP8.05□□□□□ -1.12
CHMP3-209ENST00000494623 PRSS2P07478 247 aa8.05□□□□□ -1.12
CHMP3-209ENST00000494623 RNASE1P07998 156 aaKnown RBP8.05□□□□□ -1.12
CHMP3-209ENST00000494623 UBE2D3P61077 147 aa8.05□□□□□ -1.12
CHMP3-209ENST00000494623 UBE2D2P62837 147 aa8.05□□□□□ -1.12
CHMP3-209ENST00000494623 ITPR2Q14571 2701 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms