RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 FLNAP21333 2647 aaKnown RBP12.36□□□□□ -0.43
SYP-208ENST00000494396 H3BT86 120 aa12.36□□□□□ -0.43
SYP-208ENST00000494396 NTN5Q8WTR8 489 aaPredicted RBP12.36□□□□□ -0.43
SYP-208ENST00000494396 RNASE4P34096 147 aaKnown RBP12.35□□□□□ -0.43
SYP-208ENST00000494396 SUMO4Q6EEV6 95 aa12.35□□□□□ -0.43
SYP-208ENST00000494396 FAM110AQ9BQ89 295 aa12.35□□□□□ -0.43
SYP-208ENST00000494396 TLN2Q9Y4G6 2542 aa12.35□□□□□ -0.43
SYP-208ENST00000494396 IGHV3-49A0A0A0MS15 119 aa12.34□□□□□ -0.43
SYP-208ENST00000494396 TRAV4A0A0B4J268 109 aa12.34□□□□□ -0.43
SYP-208ENST00000494396 H3BMM0 161 aa12.34□□□□□ -0.43
SYP-208ENST00000494396 UBE2WQ96B02 151 aa12.34□□□□□ -0.43
SYP-208ENST00000494396 USMG5Q96IX5 58 aa12.34□□□□□ -0.43
SYP-208ENST00000494396 TRPT1Q86TN4 253 aaKnown RBP12.34□□□□□ -0.43
SYP-208ENST00000494396 COX6CP09669 75 aa12.33□□□□□ -0.44
SYP-208ENST00000494396 HECTD1Q9ULT8 2610 aa12.33□□□□□ -0.44
SYP-208ENST00000494396 KLLNB2CW77 178 aa12.33□□□□□ -0.44
SYP-208ENST00000494396 GNRH2O43555 120 aa12.33□□□□□ -0.44
SYP-208ENST00000494396 IGLV1-40P01703 118 aa12.33□□□□□ -0.44
SYP-208ENST00000494396 PF4V1P10720 104 aa12.33□□□□□ -0.44
SYP-208ENST00000494396 EMP1P54849 157 aa12.33□□□□□ -0.44
SYP-208ENST00000494396 RPL39P62891 51 aaKnown RBP12.33□□□□□ -0.44
SYP-208ENST00000494396 CFHR3Q02985 330 aa12.33□□□□□ -0.44
SYP-208ENST00000494396 Q1RN00 199 aa12.33□□□□□ -0.44
SYP-208ENST00000494396 FAM159AQ6UWV7 190 aa12.33□□□□□ -0.44
SYP-208ENST00000494396 MUSTN1Q8IVN3 82 aa12.33□□□□□ -0.44
SYP-208ENST00000494396 ODF3Q96PU9 254 aa12.32□□□□□ -0.44
SYP-208ENST00000494396 TRAV2A0A0B4J234 112 aa12.31□□□□□ -0.44
SYP-208ENST00000494396 J3KRW8 73 aa12.31□□□□□ -0.44
SYP-208ENST00000494396 TRBV12-3P01733 135 aa12.31□□□□□ -0.44
SYP-208ENST00000494396 FASNP49327 2511 aaKnown RBP12.31□□□□□ -0.44
SYP-208ENST00000494396 TMEM95Q3KNT9 176 aa12.31□□□□□ -0.44
SYP-208ENST00000494396 DEFB121Q5J5C9 76 aa12.31□□□□□ -0.44
SYP-208ENST00000494396 EIF4EBP3O60516 100 aaPredicted RBP12.3□□□□□ -0.44
SYP-208ENST00000494396 ZNF22P17026 224 aaPredicted RBP12.3□□□□□ -0.44
SYP-208ENST00000494396 C15orf53Q8NAA6 179 aa12.3□□□□□ -0.44
SYP-208ENST00000494396 F5H697 171 aa12.3□□□□□ -0.44
SYP-208ENST00000494396 IGHV3-11P01762 117 aa12.3□□□□□ -0.44
SYP-208ENST00000494396 SPANXCQ9NY87 97 aa12.3□□□□□ -0.44
SYP-208ENST00000494396 UNQ9165/PRO28630Q6UXU0 137 aa12.29□□□□□ -0.44
SYP-208ENST00000494396 A0A0J9YXY3 114 aa12.28□□□□□ -0.44
SYP-208ENST00000494396 CRLF1O75462 422 aa12.28□□□□□ -0.44
SYP-208ENST00000494396 C2orf82Q6UX34 121 aa12.28□□□□□ -0.44
SYP-208ENST00000494396 C20orf203Q8NBC4 194 aa12.28□□□□□ -0.44
SYP-208ENST00000494396 TEX49A0A1B0GTD5 131 aa12.28□□□□□ -0.44
SYP-208ENST00000494396 CFAP161Q6P656 301 aa12.28□□□□□ -0.44
SYP-208ENST00000494396 PYGO1Q9Y3Y4 419 aa12.28□□□□□ -0.44
SYP-208ENST00000494396 MUC4Q99102 2169 aa12.28□□□□□ -0.44
SYP-208ENST00000494396 TMEM89A2RUT3 159 aa12.27□□□□□ -0.45
SYP-208ENST00000494396 TRIAP1O43715 76 aa12.27□□□□□ -0.45
SYP-208ENST00000494396 PSMB8P28062 276 aa12.27□□□□□ -0.45
SYP-208ENST00000494396 IMUPQ9GZP8 106 aa12.27□□□□□ -0.45
SYP-208ENST00000494396 SPRY2O43597 315 aa12.26□□□□□ -0.45
SYP-208ENST00000494396 ACYP1P07311 99 aa12.26□□□□□ -0.45
SYP-208ENST00000494396 ID1P41134 155 aa12.26□□□□□ -0.45
SYP-208ENST00000494396 C9orf85Q96MD7 179 aa12.26□□□□□ -0.45
SYP-208ENST00000494396 TMEM126AQ9H061 195 aa12.26□□□□□ -0.45
SYP-208ENST00000494396 ZNF702PQ9H963 129 aa12.26□□□□□ -0.45
SYP-208ENST00000494396 YAE1D1Q9NRH1 226 aa12.26□□□□□ -0.45
SYP-208ENST00000494396 ICOSQ9Y6W8 199 aa12.26□□□□□ -0.45
SYP-208ENST00000494396 SONP18583 2426 aaKnown RBP12.26□□□□□ -0.45
SYP-208ENST00000494396 ZNF469Q96JG9 3925 aaPredicted RBP12.26□□□□□ -0.45
SYP-208ENST00000494396 TRBV7-7A0A0K0K1E9 115 aa12.26□□□□□ -0.45
SYP-208ENST00000494396 CCDC179H3BU77 68 aa12.26□□□□□ -0.45
SYP-208ENST00000494396 M0QY20 66 aa12.26□□□□□ -0.45
SYP-208ENST00000494396 KRTAP1-1Q07627 177 aa12.26□□□□□ -0.45
SYP-208ENST00000494396 TMEM86BQ8N661 226 aa12.26□□□□□ -0.45
SYP-208ENST00000494396 H7C2G1 150 aa12.25□□□□□ -0.45
SYP-208ENST00000494396 I3L3M4 83 aa12.25□□□□□ -0.45
SYP-208ENST00000494396 H7C423 109 aa12.24□□□□□ -0.45
SYP-208ENST00000494396 DUX5Q96PT3 197 aa12.24□□□□□ -0.45
SYP-208ENST00000494396 LITAFQ99732 161 aa12.24□□□□□ -0.45
SYP-208ENST00000494396 TIMM21Q9BVV7 248 aa12.24□□□□□ -0.45
SYP-208ENST00000494396 EDA2RQ9HAV5 297 aa12.24□□□□□ -0.45
SYP-208ENST00000494396 ACANP16112 2415 aa12.24□□□□□ -0.45
SYP-208ENST00000494396 A0A087WWL8 130 aa12.23□□□□□ -0.45
SYP-208ENST00000494396 TIMM17BO60830 172 aa12.23□□□□□ -0.45
SYP-208ENST00000494396 IGHV3-30-3P0DP02 117 aa12.23□□□□□ -0.45
SYP-208ENST00000494396 MRPS36P82909 103 aaKnown RBP12.23□□□□□ -0.45
SYP-208ENST00000494396 MYO9AB2RTY4 2548 aa12.23□□□□□ -0.45
SYP-208ENST00000494396 IGLV4-3A0A075B6K6 122 aa12.23□□□□□ -0.45
SYP-208ENST00000494396 LST1O00453 97 aa12.23□□□□□ -0.45
SYP-208ENST00000494396 ZNF256Q9Y2P7 627 aaPredicted RBP12.23□□□□□ -0.45
SYP-208ENST00000494396 ELANEP08246 267 aa12.22□□□□□ -0.45
SYP-208ENST00000494396 RPL11P62913 178 aaKnown RBP12.22□□□□□ -0.45
SYP-208ENST00000494396 MIAQ16674 131 aa12.22□□□□□ -0.45
SYP-208ENST00000494396 C10orf99Q6UWK7 81 aa12.22□□□□□ -0.45
SYP-208ENST00000494396 Q8N2B8 174 aa12.22□□□□□ -0.45
SYP-208ENST00000494396 IGHV3-16A0A0C4DH30 117 aa12.22□□□□□ -0.45
SYP-208ENST00000494396 ZNF56Q15929 161 aa12.22□□□□□ -0.45
SYP-208ENST00000494396 JPT2Q9H910 190 aa12.22□□□□□ -0.45
SYP-208ENST00000494396 NOTCH2Q04721 2471 aa12.21□□□□□ -0.45
SYP-208ENST00000494396 IGHV1-58A0A0C4DH39 117 aa12.21□□□□□ -0.45
SYP-208ENST00000494396 K7EMT4 169 aa12.21□□□□□ -0.45
SYP-208ENST00000494396 TMEM101Q96IK0 257 aa12.21□□□□□ -0.45
SYP-208ENST00000494396 DAZ1Q9NQZ3 744 aaKnown RBP12.21□□□□□ -0.45
SYP-208ENST00000494396 A0A0J9YXV3 536 aa12.2□□□□□ -0.46
SYP-208ENST00000494396 F6UB75 175 aa12.2□□□□□ -0.46
SYP-208ENST00000494396 RHPN1-AS1Q9BWJ2 59 aa12.2□□□□□ -0.46
SYP-208ENST00000494396 DNAJC9-AS1A6NH13 148 aa12.19□□□□□ -0.46
SYP-208ENST00000494396 MEIG1Q5JSS6 88 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms