RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 Q9HAA7 133 aa9.08□□□□□ -0.96
COL1A1-208ENST00000494334 KLK12Q9UKR0 248 aa9.08□□□□□ -0.96
COL1A1-208ENST00000494334 I3L3M4 83 aa9.07□□□□□ -0.96
COL1A1-208ENST00000494334 PPP1R17O96001 155 aa9.07□□□□□ -0.96
COL1A1-208ENST00000494334 PMCHP20382 165 aa9.07□□□□□ -0.96
COL1A1-208ENST00000494334 CKS2P33552 79 aa9.07□□□□□ -0.96
COL1A1-208ENST00000494334 AMTP48728 403 aa9.07□□□□□ -0.96
COL1A1-208ENST00000494334 PKIAP61925 76 aa9.07□□□□□ -0.96
COL1A1-208ENST00000494334 ELOBQ15370 118 aa9.07□□□□□ -0.96
COL1A1-208ENST00000494334 Q8N976 141 aa9.07□□□□□ -0.96
COL1A1-208ENST00000494334 TMEM242Q9NWH2 141 aa9.07□□□□□ -0.96
COL1A1-208ENST00000494334 PKD1P98161 4303 aa9.06□□□□□ -0.96
COL1A1-208ENST00000494334 TRAV8-3A0A0A6YYJ7 113 aa9.06□□□□□ -0.96
COL1A1-208ENST00000494334 RBX1P62877 108 aa9.06□□□□□ -0.96
COL1A1-208ENST00000494334 DYNC1H1Q14204 4646 aaKnown RBP9.05□□□□□ -0.96
COL1A1-208ENST00000494334 TRBV24-1A0A075B6N3 115 aa9.05□□□□□ -0.96
COL1A1-208ENST00000494334 TRBV27A0A0K0K1C4 114 aa9.05□□□□□ -0.96
COL1A1-208ENST00000494334 D6R8Y8 96 aa9.05□□□□□ -0.96
COL1A1-208ENST00000494334 APOC3P02656 99 aa9.05□□□□□ -0.96
COL1A1-208ENST00000494334 ANGP03950 147 aaKnown RBP9.05□□□□□ -0.96
COL1A1-208ENST00000494334 SUMO2P61956 95 aaKnown RBP9.05□□□□□ -0.96
COL1A1-208ENST00000494334 RHEBQ15382 184 aa9.05□□□□□ -0.96
COL1A1-208ENST00000494334 UBE2WQ96B02 151 aa9.05□□□□□ -0.96
COL1A1-208ENST00000494334 RPS10P5Q9NQ39 176 aa9.05□□□□□ -0.96
COL1A1-208ENST00000494334 VCYO14598 125 aa9.04□□□□□ -0.96
COL1A1-208ENST00000494334 UBE2L6O14933 153 aa9.04□□□□□ -0.96
COL1A1-208ENST00000494334 TNFRSF6BO95407 300 aa9.04□□□□□ -0.96
COL1A1-208ENST00000494334 TSHBP01222 138 aa9.04□□□□□ -0.96
COL1A1-208ENST00000494334 APCSP02743 223 aa9.04□□□□□ -0.96
COL1A1-208ENST00000494334 PPBPP02775 128 aa9.04□□□□□ -0.96
COL1A1-208ENST00000494334 ENHOQ6UWT2 76 aa9.04□□□□□ -0.96
COL1A1-208ENST00000494334 C20orf78Q9BR46 151 aa9.04□□□□□ -0.96
COL1A1-208ENST00000494334 HECTD4Q9Y4D8 3996 aa9.04□□□□□ -0.96
COL1A1-208ENST00000494334 IGLV4-60A0A075B6I1 120 aa9.03□□□□□ -0.96
COL1A1-208ENST00000494334 TRAV9-1A0A075B6T8 112 aa9.03□□□□□ -0.96
COL1A1-208ENST00000494334 A0A1B0GUV1 79 aa9.03□□□□□ -0.96
COL1A1-208ENST00000494334 PSCAO43653 123 aa9.03□□□□□ -0.96
COL1A1-208ENST00000494334 ESDP10768 282 aa9.03□□□□□ -0.96
COL1A1-208ENST00000494334 S100PP25815 95 aa9.03□□□□□ -0.96
COL1A1-208ENST00000494334 Q0VG73 95 aa9.03□□□□□ -0.96
COL1A1-208ENST00000494334 NDUFA5Q16718 116 aa9.03□□□□□ -0.96
COL1A1-208ENST00000494334 TMEM136Q6ZRR5 245 aa9.03□□□□□ -0.96
COL1A1-208ENST00000494334 C20orf203Q8NBC4 194 aa9.03□□□□□ -0.96
COL1A1-208ENST00000494334 TM2D2Q9BX73 214 aa9.03□□□□□ -0.96
COL1A1-208ENST00000494334 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.02□□□□□ -0.97
COL1A1-208ENST00000494334 A0A087WTM6 91 aa9.02□□□□□ -0.97
COL1A1-208ENST00000494334 IGKV2-29A2NJV5 120 aaPredicted RBP9.02□□□□□ -0.97
COL1A1-208ENST00000494334 PHOX2AO14813 284 aa9.02□□□□□ -0.97
COL1A1-208ENST00000494334 NPYP01303 97 aa9.02□□□□□ -0.97
COL1A1-208ENST00000494334 ORMDL3Q8N138 153 aa9.02□□□□□ -0.97
COL1A1-208ENST00000494334 SVBPQ8N300 66 aa9.02□□□□□ -0.97
COL1A1-208ENST00000494334 PRR34Q9NV39 138 aa9.02□□□□□ -0.97
COL1A1-208ENST00000494334 H7C423 109 aa9.01□□□□□ -0.97
COL1A1-208ENST00000494334 SNAPINO95295 136 aa9.01□□□□□ -0.97
COL1A1-208ENST00000494334 CRPP02741 224 aa9.01□□□□□ -0.97
COL1A1-208ENST00000494334 RPL32P62910 135 aaKnown RBP9.01□□□□□ -0.97
COL1A1-208ENST00000494334 SLC7A5P1Q8MH63 180 aa9.01□□□□□ -0.97
COL1A1-208ENST00000494334 LINC00269Q8N2A0 174 aa9.01□□□□□ -0.97
COL1A1-208ENST00000494334 RMI2Q96E14 147 aa9.01□□□□□ -0.97
COL1A1-208ENST00000494334 PRELID3AQ96N28 172 aa9.01□□□□□ -0.97
COL1A1-208ENST00000494334 KIR2DL4Q99706 377 aa9.01□□□□□ -0.97
COL1A1-208ENST00000494334 DNAH5Q8TE73 4624 aa9.01□□□□□ -0.97
COL1A1-208ENST00000494334 IGKV2D-24A0A075B6R9 120 aa9□□□□□ -0.97
COL1A1-208ENST00000494334 LRCOL1A6NCL2 159 aa9□□□□□ -0.97
COL1A1-208ENST00000494334 FCER1GP30273 86 aa9□□□□□ -0.97
COL1A1-208ENST00000494334 KRTAP10-2P60368 255 aa9□□□□□ -0.97
COL1A1-208ENST00000494334 CLPSL2Q6UWE3 100 aa9□□□□□ -0.97
COL1A1-208ENST00000494334 SPATA12Q7Z6I5 190 aa9□□□□□ -0.97
COL1A1-208ENST00000494334 MAPKAPK5-AS1Q8N8E1 139 aa9□□□□□ -0.97
COL1A1-208ENST00000494334 SMIM2Q9BVW6 85 aa9□□□□□ -0.97
COL1A1-208ENST00000494334 COX11Q9Y6N1 276 aa9□□□□□ -0.97
COL1A1-208ENST00000494334 EREGO14944 169 aa8.99□□□□□ -0.97
COL1A1-208ENST00000494334 FGF6P10767 208 aa8.99□□□□□ -0.97
COL1A1-208ENST00000494334 REG3AQ06141 175 aa8.99□□□□□ -0.97
COL1A1-208ENST00000494334 MIAQ16674 131 aa8.99□□□□□ -0.97
COL1A1-208ENST00000494334 AMMECR1LQ6DCA0 310 aa8.99□□□□□ -0.97
COL1A1-208ENST00000494334 PRSS47A8MTI9 375 aa8.98□□□□□ -0.97
COL1A1-208ENST00000494334 RNASEKQ6P5S7 137 aaKnown RBP8.98□□□□□ -0.97
COL1A1-208ENST00000494334 C1orf43Q9BWL3 253 aa8.98□□□□□ -0.97
COL1A1-208ENST00000494334 GNB1LQ9BYB4 327 aa8.98□□□□□ -0.97
COL1A1-208ENST00000494334 LAMTOR2Q9Y2Q5 125 aa8.98□□□□□ -0.97
COL1A1-208ENST00000494334 LRP1BQ9NZR2 4599 aa8.98□□□□□ -0.97
COL1A1-208ENST00000494334 PKHD1P08F94 4074 aa8.97□□□□□ -0.97
COL1A1-208ENST00000494334 HLA-DQA1P01909 254 aa8.97□□□□□ -0.97
COL1A1-208ENST00000494334 WFDC2Q14508 124 aa8.97□□□□□ -0.97
COL1A1-208ENST00000494334 TCAPO15273 167 aa8.96□□□□□ -0.98
COL1A1-208ENST00000494334 ZNF25P17030 456 aaPredicted RBP8.96□□□□□ -0.98
COL1A1-208ENST00000494334 KIAA1644Q3SXP7 199 aa8.96□□□□□ -0.98
COL1A1-208ENST00000494334 COX19Q49B96 90 aa8.96□□□□□ -0.98
COL1A1-208ENST00000494334 MRPL52Q86TS9 123 aaKnown RBP8.96□□□□□ -0.98
COL1A1-208ENST00000494334 BAALCQ8WXS3 180 aa8.96□□□□□ -0.98
COL1A1-208ENST00000494334 IGLV10-54A0A075B6I4 117 aa8.95□□□□□ -0.98
COL1A1-208ENST00000494334 TGIF2-C20orf24A0A0A6YYL0 155 aa8.95□□□□□ -0.98
COL1A1-208ENST00000494334 LOC389332A0A1B0GUA5 103 aa8.95□□□□□ -0.98
COL1A1-208ENST00000494334 C16orf90A8MZG2 172 aa8.95□□□□□ -0.98
COL1A1-208ENST00000494334 LECT2O14960 151 aa8.95□□□□□ -0.98
COL1A1-208ENST00000494334 FUSP35637 526 aaKnown RBP eCLIP8.95□□□□□ -0.98
COL1A1-208ENST00000494334 KRTAP26-1Q6PEX3 210 aa8.95□□□□□ -0.98
COL1A1-208ENST00000494334 Q8N814 137 aa8.95□□□□□ -0.98
COL1A1-208ENST00000494334 TMEM101Q96IK0 257 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms