RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 Q6JHZ5 121 aa3.37□□□□□ -1.87
MSL3-217ENST00000494268 VMO1Q7Z5L0 202 aa3.37□□□□□ -1.87
MSL3-217ENST00000494268 NPBQ8NG41 125 aa3.37□□□□□ -1.87
MSL3-217ENST00000494268 CCL4L1Q8NHW4 92 aa3.37□□□□□ -1.87
MSL3-217ENST00000494268 LINC00474Q9P2X8 69 aa3.37□□□□□ -1.87
MSL3-217ENST00000494268 RIF1Q5UIP0 2472 aaKnown RBP3.37□□□□□ -1.87
MSL3-217ENST00000494268 DMDP11532 3685 aa3.37□□□□□ -1.87
MSL3-217ENST00000494268 CABIN1Q9Y6J0 2220 aa3.36□□□□□ -1.87
MSL3-217ENST00000494268 DNAH14Q0VDD8 3507 aa3.36□□□□□ -1.87
MSL3-217ENST00000494268 IGKV1-27A0A075B6S5 117 aa3.36□□□□□ -1.87
MSL3-217ENST00000494268 PIGBOS1A0A0B4J2F0 54 aa3.36□□□□□ -1.87
MSL3-217ENST00000494268 CXorf51AA0A1B0GTR3 108 aa3.36□□□□□ -1.87
MSL3-217ENST00000494268 SMIM27A0A1W2PRY6 76 aa3.36□□□□□ -1.87
MSL3-217ENST00000494268 J3QLW9 94 aa3.36□□□□□ -1.87
MSL3-217ENST00000494268 PEX7O00628 323 aa3.36□□□□□ -1.87
MSL3-217ENST00000494268 PRM2P04554 102 aa3.36□□□□□ -1.87
MSL3-217ENST00000494268 SAA1P0DJI8 122 aaPredicted RBP3.36□□□□□ -1.87
MSL3-217ENST00000494268 INAFM2P0DMQ5 153 aa3.36□□□□□ -1.87
MSL3-217ENST00000494268 CD28P10747 220 aa3.36□□□□□ -1.87
MSL3-217ENST00000494268 FGF12P61328 243 aa3.36□□□□□ -1.87
MSL3-217ENST00000494268 ATXN8Q156A1 80 aa3.36□□□□□ -1.87
MSL3-217ENST00000494268 KISS1Q15726 138 aa3.36□□□□□ -1.87
MSL3-217ENST00000494268 MRPL51Q4U2R6 128 aaKnown RBP3.36□□□□□ -1.87
MSL3-217ENST00000494268 PATE2Q6UY27 113 aa3.36□□□□□ -1.87
MSL3-217ENST00000494268 NPCDR1Q9BY65 106 aa3.36□□□□□ -1.87
MSL3-217ENST00000494268 CCL28Q9NRJ3 127 aa3.36□□□□□ -1.87
MSL3-217ENST00000494268 V9GYV3 84 aa3.36□□□□□ -1.87
MSL3-217ENST00000494268 GOLGA4Q13439 2230 aaKnown RBP3.36□□□□□ -1.87
MSL3-217ENST00000494268 MYO15AQ9UKN7 3530 aa3.36□□□□□ -1.87
MSL3-217ENST00000494268 CTXND1A0A1B0GTU2 59 aa3.35□□□□□ -1.87
MSL3-217ENST00000494268 C17orf51A8MQB3 221 aa3.35□□□□□ -1.87
MSL3-217ENST00000494268 HMGN2P05204 90 aaKnown RBP3.35□□□□□ -1.87
MSL3-217ENST00000494268 IFI27P40305 119 aaPredicted RBP3.35□□□□□ -1.87
MSL3-217ENST00000494268 ZNF138P52744 262 aa3.35□□□□□ -1.87
MSL3-217ENST00000494268 RBM3P98179 157 aaKnown RBP3.35□□□□□ -1.87
MSL3-217ENST00000494268 CIRBPQ14011 172 aaKnown RBP3.35□□□□□ -1.87
MSL3-217ENST00000494268 RBMY1FQ15415 496 aaKnown RBP3.35□□□□□ -1.87
MSL3-217ENST00000494268 ATP5EP2Q5VTU8 51 aa3.35□□□□□ -1.87
MSL3-217ENST00000494268 SCXQ7RTU7 201 aa3.35□□□□□ -1.87
MSL3-217ENST00000494268 DEFB124Q8NES8 71 aa3.35□□□□□ -1.87
MSL3-217ENST00000494268 ITLN2Q8WWU7 325 aaPredicted RBP3.35□□□□□ -1.87
MSL3-217ENST00000494268 SPTBN2O15020 2390 aa3.35□□□□□ -1.87
MSL3-217ENST00000494268 RP1P56715 2156 aa3.35□□□□□ -1.87
MSL3-217ENST00000494268 ASCC3Q8N3C0 2202 aaKnown RBP3.35□□□□□ -1.87
MSL3-217ENST00000494268 DMXL1Q9Y485 3027 aa3.34□□□□□ -1.87
MSL3-217ENST00000494268 UNC13CQ8NB66 2214 aa3.34□□□□□ -1.87
MSL3-217ENST00000494268 POLEQ07864 2286 aa3.34□□□□□ -1.87
MSL3-217ENST00000494268 IQCF6A8MYZ5 107 aa3.34□□□□□ -1.87
MSL3-217ENST00000494268 DEFB133Q30KQ1 61 aa3.34□□□□□ -1.87
MSL3-217ENST00000494268 RPRMLQ8N4K4 120 aa3.34□□□□□ -1.87
MSL3-217ENST00000494268 FAM216BQ8N7L0 139 aa3.34□□□□□ -1.87
MSL3-217ENST00000494268 DYNLRB2Q8TF09 96 aa3.34□□□□□ -1.87
MSL3-217ENST00000494268 PATE1Q8WXA2 126 aa3.34□□□□□ -1.87
MSL3-217ENST00000494268 TIMM21Q9BVV7 248 aa3.34□□□□□ -1.87
MSL3-217ENST00000494268 COL27A1Q8IZC6 1860 aaPredicted RBP3.34□□□□□ -1.87
MSL3-217ENST00000494268 PTPRBP23467 1997 aa3.34□□□□□ -1.88
MSL3-217ENST00000494268 EXPH5Q8NEV8 1989 aa3.34□□□□□ -1.88
MSL3-217ENST00000494268 ASXL3Q9C0F0 2248 aa3.34□□□□□ -1.88
MSL3-217ENST00000494268 PHF3Q92576 2039 aaKnown RBP3.33□□□□□ -1.88
MSL3-217ENST00000494268 IGKV2-28A0A075B6P5 120 aa3.33□□□□□ -1.88
MSL3-217ENST00000494268 TRAV7A0A075B6U4 112 aa3.33□□□□□ -1.88
MSL3-217ENST00000494268 IGLV3-32A0A0A0MS00 114 aa3.33□□□□□ -1.88
MSL3-217ENST00000494268 TRBV10-3A0A0K0K1G6 114 aa3.33□□□□□ -1.88
MSL3-217ENST00000494268 TEX49A0A1B0GTD5 131 aa3.33□□□□□ -1.88
MSL3-217ENST00000494268 PCNX2A6NKB5 2137 aa3.33□□□□□ -1.88
MSL3-217ENST00000494268 C10orf142B7Z368 130 aa3.33□□□□□ -1.88
MSL3-217ENST00000494268 C3orf84H3BNL1 204 aa3.33□□□□□ -1.88
MSL3-217ENST00000494268 PIN1P1O15428 100 aa3.33□□□□□ -1.88
MSL3-217ENST00000494268 IGKV2D-28P01615 120 aa3.33□□□□□ -1.88
MSL3-217ENST00000494268 IGLV3-19P01714 112 aa3.33□□□□□ -1.88
MSL3-217ENST00000494268 IGKV1-16P04430 117 aa3.33□□□□□ -1.88
MSL3-217ENST00000494268 NPPCP23582 126 aa3.33□□□□□ -1.88
MSL3-217ENST00000494268 REG3AQ06141 175 aa3.33□□□□□ -1.88
MSL3-217ENST00000494268 FAM223AQ8IWN6 122 aa3.33□□□□□ -1.88
MSL3-217ENST00000494268 Q96M85 177 aa3.33□□□□□ -1.88
MSL3-217ENST00000494268 OTOGLQ3ZCN5 2332 aa3.33□□□□□ -1.88
MSL3-217ENST00000494268 GVINP1Q7Z2Y8 2422 aa3.33□□□□□ -1.88
MSL3-217ENST00000494268 ZNF292O60281 2723 aa3.33□□□□□ -1.88
MSL3-217ENST00000494268 CFAP54Q96N23 3096 aa3.32□□□□□ -1.88
MSL3-217ENST00000494268 LOC107984156A0A0G2JMH3 177 aa3.32□□□□□ -1.88
MSL3-217ENST00000494268 LINC01549A6NIU2 74 aa3.32□□□□□ -1.88
MSL3-217ENST00000494268 H3BVH4 76 aa3.32□□□□□ -1.88
MSL3-217ENST00000494268 GNRH2O43555 120 aa3.32□□□□□ -1.88
MSL3-217ENST00000494268 ERC2-IT1O76042 136 aa3.32□□□□□ -1.88
MSL3-217ENST00000494268 SPINT3P49223 89 aa3.32□□□□□ -1.88
MSL3-217ENST00000494268 EIF4EBP1Q13541 118 aaPredicted RBP3.32□□□□□ -1.88
MSL3-217ENST00000494268 PP632Q6XCG6 107 aa3.32□□□□□ -1.88
MSL3-217ENST00000494268 LINC00173Q6ZV60 143 aa3.32□□□□□ -1.88
MSL3-217ENST00000494268 ARL17AQ8IVW1 177 aa3.32□□□□□ -1.88
MSL3-217ENST00000494268 CLEC2BQ92478 149 aa3.32□□□□□ -1.88
MSL3-217ENST00000494268 CYP4F30PQ9H0H9 118 aa3.32□□□□□ -1.88
MSL3-217ENST00000494268 UBE2D4Q9Y2X8 147 aa3.32□□□□□ -1.88
MSL3-217ENST00000494268 ZNF706Q9Y5V0 76 aaPredicted RBP3.32□□□□□ -1.88
MSL3-217ENST00000494268 FAM186AA6NE01 2351 aa3.32□□□□□ -1.88
MSL3-217ENST00000494268 SPEGQ15772 3267 aa3.32□□□□□ -1.88
MSL3-217ENST00000494268 SPTBP11277 2137 aa3.31□□□□□ -1.88
MSL3-217ENST00000494268 COL5A1P20908 1838 aaPredicted RBP3.31□□□□□ -1.88
MSL3-217ENST00000494268 IGLV3-9A0A075B6K5 115 aa3.31□□□□□ -1.88
MSL3-217ENST00000494268 TMSB15BA0A087X1C1 80 aa3.31□□□□□ -1.88
MSL3-217ENST00000494268 IGHV1-45A0A0A0MS14 117 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 258.5 ms