RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 UBE2L6O14933 153 aa8.42□□□□□ -1.06
TRA2A-209ENST00000494255 GAGE6Q13070 117 aa8.42□□□□□ -1.06
TRA2A-209ENST00000494255 LAGE3Q14657 143 aa8.42□□□□□ -1.06
TRA2A-209ENST00000494255 NRACQ8N912 160 aa8.42□□□□□ -1.06
TRA2A-209ENST00000494255 TMEM70Q9BUB7 260 aa8.42□□□□□ -1.06
TRA2A-209ENST00000494255 D6R8Y8 96 aa8.41□□□□□ -1.06
TRA2A-209ENST00000494255 APCSP02743 223 aa8.41□□□□□ -1.06
TRA2A-209ENST00000494255 SUMO2P61956 95 aaKnown RBP8.41□□□□□ -1.06
TRA2A-209ENST00000494255 Q9HAA7 133 aa8.41□□□□□ -1.06
TRA2A-209ENST00000494255 KLK12Q9UKR0 248 aa8.41□□□□□ -1.06
TRA2A-209ENST00000494255 VCYO14598 125 aa8.4□□□□□ -1.06
TRA2A-209ENST00000494255 POLR2KP53803 58 aaKnown RBP8.4□□□□□ -1.06
TRA2A-209ENST00000494255 MPV17L2Q567V2 206 aa8.4□□□□□ -1.06
TRA2A-209ENST00000494255 SLC7A5P1Q8MH63 180 aa8.4□□□□□ -1.06
TRA2A-209ENST00000494255 ORMDL3Q8N138 153 aa8.4□□□□□ -1.06
TRA2A-209ENST00000494255 TRAV8-3A0A0A6YYJ7 113 aa8.4□□□□□ -1.07
TRA2A-209ENST00000494255 TRBV27A0A0K0K1C4 114 aa8.4□□□□□ -1.07
TRA2A-209ENST00000494255 TNFRSF6BO95407 300 aa8.4□□□□□ -1.07
TRA2A-209ENST00000494255 ANGP03950 147 aaKnown RBP8.4□□□□□ -1.07
TRA2A-209ENST00000494255 ATRAIDQ6UW56 229 aa8.4□□□□□ -1.07
TRA2A-209ENST00000494255 TMEM136Q6ZRR5 245 aa8.4□□□□□ -1.07
TRA2A-209ENST00000494255 KIR2DL4Q99706 377 aa8.4□□□□□ -1.07
TRA2A-209ENST00000494255 C20orf78Q9BR46 151 aa8.4□□□□□ -1.07
TRA2A-209ENST00000494255 TRBV24-1A0A075B6N3 115 aa8.39□□□□□ -1.07
TRA2A-209ENST00000494255 PHOX2AO14813 284 aa8.39□□□□□ -1.07
TRA2A-209ENST00000494255 FCER1GP30273 86 aa8.39□□□□□ -1.07
TRA2A-209ENST00000494255 TNP2Q05952 138 aa8.39□□□□□ -1.07
TRA2A-209ENST00000494255 Q6ZRN7 208 aaPredicted RBP8.39□□□□□ -1.07
TRA2A-209ENST00000494255 PRELID3AQ96N28 172 aa8.39□□□□□ -1.07
TRA2A-209ENST00000494255 PSCAO43653 123 aa8.38□□□□□ -1.07
TRA2A-209ENST00000494255 TSHBP01222 138 aa8.38□□□□□ -1.07
TRA2A-209ENST00000494255 NPYP01303 97 aa8.38□□□□□ -1.07
TRA2A-209ENST00000494255 CRPP02741 224 aa8.38□□□□□ -1.07
TRA2A-209ENST00000494255 RBX1P62877 108 aa8.38□□□□□ -1.07
TRA2A-209ENST00000494255 COX19Q49B96 90 aa8.38□□□□□ -1.07
TRA2A-209ENST00000494255 UBE2WQ96B02 151 aa8.38□□□□□ -1.07
TRA2A-209ENST00000494255 RMI2Q96E14 147 aa8.38□□□□□ -1.07
TRA2A-209ENST00000494255 TM2D2Q9BX73 214 aa8.38□□□□□ -1.07
TRA2A-209ENST00000494255 H7C423 109 aa8.37□□□□□ -1.07
TRA2A-209ENST00000494255 HLA-DQA1P01909 254 aa8.37□□□□□ -1.07
TRA2A-209ENST00000494255 RPL32P62910 135 aaKnown RBP8.37□□□□□ -1.07
TRA2A-209ENST00000494255 Q0VG73 95 aa8.37□□□□□ -1.07
TRA2A-209ENST00000494255 AMMECR1LQ6DCA0 310 aa8.37□□□□□ -1.07
TRA2A-209ENST00000494255 Q8N976 141 aa8.37□□□□□ -1.07
TRA2A-209ENST00000494255 LAMTOR2Q9Y2Q5 125 aa8.37□□□□□ -1.07
TRA2A-209ENST00000494255 A0A1B0GUV1 79 aa8.37□□□□□ -1.07
TRA2A-209ENST00000494255 TCAPO15273 167 aa8.37□□□□□ -1.07
TRA2A-209ENST00000494255 SMIM2Q9BVW6 85 aa8.37□□□□□ -1.07
TRA2A-209ENST00000494255 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.36□□□□□ -1.07
TRA2A-209ENST00000494255 IGKV2-29A2NJV5 120 aaPredicted RBP8.36□□□□□ -1.07
TRA2A-209ENST00000494255 EREGO14944 169 aa8.36□□□□□ -1.07
TRA2A-209ENST00000494255 RNASEKQ6P5S7 137 aaKnown RBP8.36□□□□□ -1.07
TRA2A-209ENST00000494255 GNB1LQ9BYB4 327 aa8.36□□□□□ -1.07
TRA2A-209ENST00000494255 COX11Q9Y6N1 276 aa8.36□□□□□ -1.07
TRA2A-209ENST00000494255 IGKV2D-24A0A075B6R9 120 aa8.35□□□□□ -1.07
TRA2A-209ENST00000494255 LINC00269Q8N2A0 174 aa8.35□□□□□ -1.07
TRA2A-209ENST00000494255 MAP1LC3AQ9H492 121 aa8.35□□□□□ -1.07
TRA2A-209ENST00000494255 MT-ND6P03923 174 aa8.34□□□□□ -1.07
TRA2A-209ENST00000494255 FGF6P10767 208 aa8.34□□□□□ -1.07
TRA2A-209ENST00000494255 ESDP10768 282 aa8.34□□□□□ -1.07
TRA2A-209ENST00000494255 IGLV4-60A0A075B6I1 120 aa8.34□□□□□ -1.08
TRA2A-209ENST00000494255 TGIF2-C20orf24A0A0A6YYL0 155 aa8.34□□□□□ -1.08
TRA2A-209ENST00000494255 A0A1B0GVY2 172 aa8.34□□□□□ -1.08
TRA2A-209ENST00000494255 ZNF25P17030 456 aaPredicted RBP8.34□□□□□ -1.08
TRA2A-209ENST00000494255 SMAGPQ0VAQ4 97 aa8.34□□□□□ -1.08
TRA2A-209ENST00000494255 MIAQ16674 131 aa8.34□□□□□ -1.08
TRA2A-209ENST00000494255 CLPSL2Q6UWE3 100 aa8.34□□□□□ -1.08
TRA2A-209ENST00000494255 ENHOQ6UWT2 76 aa8.34□□□□□ -1.08
TRA2A-209ENST00000494255 C20orf203Q8NBC4 194 aa8.34□□□□□ -1.08
TRA2A-209ENST00000494255 TMEM18Q96B42 140 aa8.34□□□□□ -1.08
TRA2A-209ENST00000494255 TMEM101Q96IK0 257 aa8.34□□□□□ -1.08
TRA2A-209ENST00000494255 C1orf43Q9BWL3 253 aa8.34□□□□□ -1.08
TRA2A-209ENST00000494255 RAB5AP20339 215 aa8.33□□□□□ -1.08
TRA2A-209ENST00000494255 REG3AQ06141 175 aa8.33□□□□□ -1.08
TRA2A-209ENST00000494255 KIAA1644Q3SXP7 199 aa8.33□□□□□ -1.08
TRA2A-209ENST00000494255 PRR34Q9NV39 138 aa8.33□□□□□ -1.08
TRA2A-209ENST00000494255 LOC389332A0A1B0GUA5 103 aa8.32□□□□□ -1.08
TRA2A-209ENST00000494255 PRSS47A8MTI9 375 aa8.32□□□□□ -1.08
TRA2A-209ENST00000494255 OR5A1Q8NGJ0 315 aa8.32□□□□□ -1.08
TRA2A-209ENST00000494255 A0A087WTM6 91 aa8.31□□□□□ -1.08
TRA2A-209ENST00000494255 FABP9Q0Z7S8 132 aa8.31□□□□□ -1.08
TRA2A-209ENST00000494255 DGAT2L7PQ6IED9 249 aa8.31□□□□□ -1.08
TRA2A-209ENST00000494255 MRPL52Q86TS9 123 aaKnown RBP8.31□□□□□ -1.08
TRA2A-209ENST00000494255 MRPL18Q9H0U6 180 aaKnown RBP8.31□□□□□ -1.08
TRA2A-209ENST00000494255 SMCO4Q9NRQ5 59 aa8.31□□□□□ -1.08
TRA2A-209ENST00000494255 Q8N8P6 123 aa8.3□□□□□ -1.08
TRA2A-209ENST00000494255 DNAH10Q8IVF4 4471 aa8.3□□□□□ -1.08
TRA2A-209ENST00000494255 FRAS1Q86XX4 4008 aa8.3□□□□□ -1.08
TRA2A-209ENST00000494255 TRAV8-4A0A0B4J246 113 aa8.3□□□□□ -1.08
TRA2A-209ENST00000494255 SPATA12Q7Z6I5 190 aa8.3□□□□□ -1.08
TRA2A-209ENST00000494255 NXT2Q9NPJ8 142 aaKnown RBP8.3□□□□□ -1.08
TRA2A-209ENST00000494255 TRAPPC1Q9Y5R8 145 aa8.3□□□□□ -1.08
TRA2A-209ENST00000494255 IGKV3OR2-268A0A0C4DH90 116 aa8.29□□□□□ -1.08
TRA2A-209ENST00000494255 IGLV10-54A0A075B6I4 117 aa8.28□□□□□ -1.08
TRA2A-209ENST00000494255 LRCOL1A6NCL2 159 aa8.28□□□□□ -1.08
TRA2A-209ENST00000494255 CBLN2Q8IUK8 224 aa8.28□□□□□ -1.08
TRA2A-209ENST00000494255 ALKBH7Q9BT30 221 aaPredicted RBP8.28□□□□□ -1.08
TRA2A-209ENST00000494255 TIMM21Q9BVV7 248 aa8.28□□□□□ -1.08
TRA2A-209ENST00000494255 UBE2D4Q9Y2X8 147 aa8.28□□□□□ -1.08
TRA2A-209ENST00000494255 CSDC2Q9Y534 153 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 348.4 ms