RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 SMIM2Q9BVW6 85 aa4.38□□□□□ -1.71
CPSF7-213ENST00000494016 ZNF256Q9Y2P7 627 aaPredicted RBP4.38□□□□□ -1.71
CPSF7-213ENST00000494016 GOLT1BQ9Y3E0 138 aa4.38□□□□□ -1.71
CPSF7-213ENST00000494016 HLA-DRB4X5D2U9 266 aa4.38□□□□□ -1.71
CPSF7-213ENST00000494016 PRM2P04554 102 aa4.37□□□□□ -1.71
CPSF7-213ENST00000494016 MGPP08493 103 aa4.37□□□□□ -1.71
CPSF7-213ENST00000494016 HNRNPA3P51991 378 aaKnown RBP4.37□□□□□ -1.71
CPSF7-213ENST00000494016 POLR2KP53803 58 aaKnown RBP4.37□□□□□ -1.71
CPSF7-213ENST00000494016 RPL32P62910 135 aaKnown RBP4.37□□□□□ -1.71
CPSF7-213ENST00000494016 KRTAP24-1Q3LI83 254 aa4.37□□□□□ -1.71
CPSF7-213ENST00000494016 TM2D2Q9BX73 214 aa4.37□□□□□ -1.71
CPSF7-213ENST00000494016 MAP6D1Q9H9H5 199 aa4.37□□□□□ -1.71
CPSF7-213ENST00000494016 TP73-AS1Q9UF72 201 aa4.37□□□□□ -1.71
CPSF7-213ENST00000494016 HHLA3Q9XRX5 114 aa4.37□□□□□ -1.71
CPSF7-213ENST00000494016 SORL1Q92673 2214 aa4.37□□□□□ -1.71
CPSF7-213ENST00000494016 K7EMI3 77 aa4.36□□□□□ -1.71
CPSF7-213ENST00000494016 ATP5LO75964 103 aa4.36□□□□□ -1.71
CPSF7-213ENST00000494016 PRSS1P07477 247 aa4.36□□□□□ -1.71
CPSF7-213ENST00000494016 COX8AP10176 69 aa4.36□□□□□ -1.71
CPSF7-213ENST00000494016 FGF6P10767 208 aa4.36□□□□□ -1.71
CPSF7-213ENST00000494016 G0S2P27469 103 aa4.36□□□□□ -1.71
CPSF7-213ENST00000494016 HILS1P60008 231 aa4.36□□□□□ -1.71
CPSF7-213ENST00000494016 MORN3Q6PF18 240 aaPredicted RBP4.36□□□□□ -1.71
CPSF7-213ENST00000494016 SLC25A34Q6PIV7 304 aa4.36□□□□□ -1.71
CPSF7-213ENST00000494016 DYNLRB2Q8TF09 96 aa4.36□□□□□ -1.71
CPSF7-213ENST00000494016 RPL36ALQ969Q0 106 aaKnown RBP4.36□□□□□ -1.71
CPSF7-213ENST00000494016 TOMM6Q96B49 74 aa4.36□□□□□ -1.71
CPSF7-213ENST00000494016 AP1S3Q96PC3 154 aa4.36□□□□□ -1.71
CPSF7-213ENST00000494016 LINC00467Q9BRT7 94 aa4.36□□□□□ -1.71
CPSF7-213ENST00000494016 CSTL1Q9H114 145 aa4.36□□□□□ -1.71
CPSF7-213ENST00000494016 TSSC4Q9Y5U2 329 aaPredicted RBP4.36□□□□□ -1.71
CPSF7-213ENST00000494016 A0A087WX48 190 aa4.35□□□□□ -1.71
CPSF7-213ENST00000494016 TRBV6-5A0A0K0K1A5 114 aa4.35□□□□□ -1.71
CPSF7-213ENST00000494016 M0QY20 66 aa4.35□□□□□ -1.71
CPSF7-213ENST00000494016 PPP1R17O96001 155 aa4.35□□□□□ -1.71
CPSF7-213ENST00000494016 RPL13AP40429 203 aaKnown RBP4.35□□□□□ -1.71
CPSF7-213ENST00000494016 HINT1P49773 126 aaPredicted RBP4.35□□□□□ -1.71
CPSF7-213ENST00000494016 KRTAP10-3P60369 221 aa4.35□□□□□ -1.71
CPSF7-213ENST00000494016 BATFQ16520 125 aa4.35□□□□□ -1.71
CPSF7-213ENST00000494016 ODF3L2Q3SX64 289 aa4.35□□□□□ -1.71
CPSF7-213ENST00000494016 ORMDL2Q53FV1 153 aa4.35□□□□□ -1.71
CPSF7-213ENST00000494016 COL5A1-AS1Q5SY13 56 aa4.35□□□□□ -1.71
CPSF7-213ENST00000494016 C2orf91Q6ZV80 131 aa4.35□□□□□ -1.71
CPSF7-213ENST00000494016 NEGR1Q7Z3B1 354 aa4.35□□□□□ -1.71
CPSF7-213ENST00000494016 BOD1L2Q8IYS8 172 aa4.35□□□□□ -1.71
CPSF7-213ENST00000494016 ZNF418Q8TF45 676 aaPredicted RBP4.35□□□□□ -1.71
CPSF7-213ENST00000494016 PTH2Q96A98 100 aa4.35□□□□□ -1.71
CPSF7-213ENST00000494016 TRAV12-1A0A0B4J245 112 aa4.34□□□□□ -1.71
CPSF7-213ENST00000494016 DLEU1O43261 78 aa4.34□□□□□ -1.71
CPSF7-213ENST00000494016 IGKCP01834 107 aa4.34□□□□□ -1.71
CPSF7-213ENST00000494016 AZU1P20160 251 aa4.34□□□□□ -1.71
CPSF7-213ENST00000494016 ZNF415Q09FC8 603 aa4.34□□□□□ -1.71
CPSF7-213ENST00000494016 ZNF876PQ49A33 203 aa4.34□□□□□ -1.71
CPSF7-213ENST00000494016 UFSP1Q6NVU6 142 aa4.34□□□□□ -1.71
CPSF7-213ENST00000494016 C1orf158Q8N1D5 194 aa4.34□□□□□ -1.71
CPSF7-213ENST00000494016 NEXN-AS1Q8NBZ9 246 aa4.34□□□□□ -1.71
CPSF7-213ENST00000494016 SCGB3A1Q96QR1 104 aa4.34□□□□□ -1.71
CPSF7-213ENST00000494016 CMYA5Q8N3K9 4069 aa4.34□□□□□ -1.72
CPSF7-213ENST00000494016 IGKV2D-26A0A0A0MRZ7 120 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 TRBV27A0A0K0K1C4 114 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 SDHAF1A6NFY7 115 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 IGIPA6NJ69 53 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.33□□□□□ -1.72
CPSF7-213ENST00000494016 H7C1H1 209 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 DPM2O94777 84 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 TSHBP01222 138 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 P0DMU3 169 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 FAM231AP0DMU4 169 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 FAM231CP0DMU5 169 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 MPV17L2Q567V2 206 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 PIK3CD-AS1Q5SR53 167 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 BVES-AS1Q5T3Y7 98 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 C10orf25Q5T742 122 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 C2orf66Q6UXQ4 117 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 ZFP2Q6ZN57 461 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 TRPT1Q86TN4 253 aaKnown RBP4.33□□□□□ -1.72
CPSF7-213ENST00000494016 PCP2Q8IVA1 136 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 C11orf72Q8NBR9 251 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 MRAPQ8TCY5 172 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 DEFB104AQ8WTQ1 72 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 LINC01587Q99440 93 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 EDA2RQ9HAV5 297 aa4.33□□□□□ -1.72
CPSF7-213ENST00000494016 MRPL35Q9NZE8 188 aaKnown RBP4.33□□□□□ -1.72
CPSF7-213ENST00000494016 NOTCH1P46531 2555 aa4.32□□□□□ -1.72
CPSF7-213ENST00000494016 M0R2P5 195 aa4.32□□□□□ -1.72
CPSF7-213ENST00000494016 IGLV1-51P01701 117 aa4.32□□□□□ -1.72
CPSF7-213ENST00000494016 GIG44P09565 113 aaPredicted RBP4.32□□□□□ -1.72
CPSF7-213ENST00000494016 HTN1P15515 57 aa4.32□□□□□ -1.72
CPSF7-213ENST00000494016 ZNF25P17030 456 aaPredicted RBP4.32□□□□□ -1.72
CPSF7-213ENST00000494016 CMC4P56277 68 aaPredicted RBP4.32□□□□□ -1.72
CPSF7-213ENST00000494016 TCTAP57738 103 aa4.32□□□□□ -1.72
CPSF7-213ENST00000494016 NSUN5P1Q3KNT7 163 aa4.32□□□□□ -1.72
CPSF7-213ENST00000494016 FAM74A4Q5TZK3 123 aa4.32□□□□□ -1.72
CPSF7-213ENST00000494016 Q6ZVH6 145 aa4.32□□□□□ -1.72
CPSF7-213ENST00000494016 GTSCR1Q86UQ5 136 aa4.32□□□□□ -1.72
CPSF7-213ENST00000494016 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.32□□□□□ -1.72
CPSF7-213ENST00000494016 MAPKAPK5-AS1Q8N8E1 139 aa4.32□□□□□ -1.72
CPSF7-213ENST00000494016 BAALCQ8WXS3 180 aa4.32□□□□□ -1.72
CPSF7-213ENST00000494016 XCL2Q9UBD3 114 aa4.32□□□□□ -1.72
CPSF7-213ENST00000494016 Q9UF83 564 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms