RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 MIAQ16674 131 aa14.93□□□□□ -0.02
SNIP1-203ENST00000493916 RPL39LQ96EH5 51 aaKnown RBP14.93□□□□□ -0.02
SNIP1-203ENST00000493916 TMEM191AQ9H0A3 160 aa14.93□□□□□ -0.02
SNIP1-203ENST00000493916 ABCA13Q86UQ4 5058 aa14.92□□□□□ -0.02
SNIP1-203ENST00000493916 A0A1B0GUV1 79 aa14.91□□□□□ -0.02
SNIP1-203ENST00000493916 AMTP48728 403 aa14.91□□□□□ -0.02
SNIP1-203ENST00000493916 Q8N1X5 172 aa14.91□□□□□ -0.02
SNIP1-203ENST00000493916 NUP35Q8NFH5 326 aa14.91□□□□□ -0.02
SNIP1-203ENST00000493916 RIGQ13278 110 aa14.9□□□□□ -0.02
SNIP1-203ENST00000493916 LINC00269Q8N2A0 174 aa14.9□□□□□ -0.02
SNIP1-203ENST00000493916 KRTAP4-5Q9BYR2 181 aa14.9□□□□□ -0.02
SNIP1-203ENST00000493916 NAT8BQ9UHF3 227 aa14.9□□□□□ -0.02
SNIP1-203ENST00000493916 TRBV6-5A0A0K0K1A5 114 aa14.89□□□□□ -0.03
SNIP1-203ENST00000493916 NCR2O95944 276 aa14.89□□□□□ -0.03
SNIP1-203ENST00000493916 XGP55808 180 aa14.89□□□□□ -0.03
SNIP1-203ENST00000493916 SMIM27A0A1W2PRY6 76 aa14.88□□□□□ -0.03
SNIP1-203ENST00000493916 SDHAF1A6NFY7 115 aa14.88□□□□□ -0.03
SNIP1-203ENST00000493916 UBE2L6O14933 153 aa14.88□□□□□ -0.03
SNIP1-203ENST00000493916 C20orf203Q8NBC4 194 aa14.88□□□□□ -0.03
SNIP1-203ENST00000493916 DEFB104AQ8WTQ1 72 aa14.88□□□□□ -0.03
SNIP1-203ENST00000493916 RNF185Q96GF1 192 aa14.88□□□□□ -0.03
SNIP1-203ENST00000493916 TMEM70Q9BUB7 260 aa14.88□□□□□ -0.03
SNIP1-203ENST00000493916 CLPSL2Q6UWE3 100 aa14.87□□□□□ -0.03
SNIP1-203ENST00000493916 MRAP2Q96G30 205 aa14.87□□□□□ -0.03
SNIP1-203ENST00000493916 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.86□□□□□ -0.03
SNIP1-203ENST00000493916 RAB4AP20338 218 aa14.86□□□□□ -0.03
SNIP1-203ENST00000493916 RAB14P61106 215 aa14.86□□□□□ -0.03
SNIP1-203ENST00000493916 REG3AQ06141 175 aa14.86□□□□□ -0.03
SNIP1-203ENST00000493916 AMN1Q8IY45 258 aa14.86□□□□□ -0.03
SNIP1-203ENST00000493916 IGLV4-60A0A075B6I1 120 aa14.85□□□□□ -0.03
SNIP1-203ENST00000493916 GAS8-AS1O95177 125 aa14.85□□□□□ -0.03
SNIP1-203ENST00000493916 C14orf177Q52M58 125 aa14.85□□□□□ -0.03
SNIP1-203ENST00000493916 I3L3M4 83 aa14.84□□□□□ -0.03
SNIP1-203ENST00000493916 APCSP02743 223 aa14.84□□□□□ -0.03
SNIP1-203ENST00000493916 KRTAP26-1Q6PEX3 210 aa14.84□□□□□ -0.03
SNIP1-203ENST00000493916 ST20Q9HBF5 79 aa14.84□□□□□ -0.03
SNIP1-203ENST00000493916 DNAH8Q96JB1 4490 aa14.84□□□□□ -0.03
SNIP1-203ENST00000493916 HLA-DQA1P01909 254 aa14.83□□□□□ -0.04
SNIP1-203ENST00000493916 TRAV8-4A0A0B4J246 113 aa14.82□□□□□ -0.04
SNIP1-203ENST00000493916 A0A1B0GW15 77 aa14.82□□□□□ -0.04
SNIP1-203ENST00000493916 H7C423 109 aa14.82□□□□□ -0.04
SNIP1-203ENST00000493916 RPS10P46783 165 aaKnown RBP14.82□□□□□ -0.04
SNIP1-203ENST00000493916 PMCHP20382 165 aa14.81□□□□□ -0.04
SNIP1-203ENST00000493916 USP17L23D6RBM5 183 aa14.8□□□□□ -0.04
SNIP1-203ENST00000493916 POLR2KP53803 58 aaKnown RBP14.8□□□□□ -0.04
SNIP1-203ENST00000493916 TRBV27A0A0K0K1C4 114 aa14.79□□□□□ -0.04
SNIP1-203ENST00000493916 PPP1R17O96001 155 aa14.79□□□□□ -0.04
SNIP1-203ENST00000493916 TSHBP01222 138 aa14.79□□□□□ -0.04
SNIP1-203ENST00000493916 CLLU1Q5K131 121 aa14.79□□□□□ -0.04
SNIP1-203ENST00000493916 Q6ZSA8 131 aa14.79□□□□□ -0.04
SNIP1-203ENST00000493916 IGLV10-54A0A075B6I4 117 aa14.78□□□□□ -0.04
SNIP1-203ENST00000493916 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.78□□□□□ -0.04
SNIP1-203ENST00000493916 IGKV2-29A2NJV5 120 aaPredicted RBP14.78□□□□□ -0.04
SNIP1-203ENST00000493916 FAM104BQ5XKR9 115 aa14.78□□□□□ -0.04
SNIP1-203ENST00000493916 AMMECR1LQ6DCA0 310 aa14.78□□□□□ -0.04
SNIP1-203ENST00000493916 FAM30AQ9NZY2 134 aa14.78□□□□□ -0.04
SNIP1-203ENST00000493916 SMKR1H3BMG3 65 aa14.77□□□□□ -0.05
SNIP1-203ENST00000493916 ESDP10768 282 aa14.77□□□□□ -0.05
SNIP1-203ENST00000493916 PNRC1Q12796 327 aaPredicted RBP14.77□□□□□ -0.05
SNIP1-203ENST00000493916 NRACQ8N912 160 aa14.77□□□□□ -0.05
SNIP1-203ENST00000493916 TMEM242Q9NWH2 141 aa14.77□□□□□ -0.05
SNIP1-203ENST00000493916 FAT1Q14517 4588 aa14.76□□□□□ -0.05
SNIP1-203ENST00000493916 PPP1R2P9O14990 202 aa14.76□□□□□ -0.05
SNIP1-203ENST00000493916 FGF6P10767 208 aa14.76□□□□□ -0.05
SNIP1-203ENST00000493916 ZNF25P17030 456 aaPredicted RBP14.76□□□□□ -0.05
SNIP1-203ENST00000493916 CAMPP49913 170 aa14.76□□□□□ -0.05
SNIP1-203ENST00000493916 MRPL51Q4U2R6 128 aaKnown RBP14.76□□□□□ -0.05
SNIP1-203ENST00000493916 A0A1B0GXF2 115 aa14.75□□□□□ -0.05
SNIP1-203ENST00000493916 EPM2AB3EWF7 344 aa14.75□□□□□ -0.05
SNIP1-203ENST00000493916 S100A8P05109 93 aa14.75□□□□□ -0.05
SNIP1-203ENST00000493916 HBBP68871 147 aa14.75□□□□□ -0.05
SNIP1-203ENST00000493916 VCYO14598 125 aa14.74□□□□□ -0.05
SNIP1-203ENST00000493916 SUMO2P61956 95 aaKnown RBP14.74□□□□□ -0.05
SNIP1-203ENST00000493916 HAMPP81172 84 aa14.74□□□□□ -0.05
SNIP1-203ENST00000493916 MRPL54Q6P161 138 aaKnown RBP14.74□□□□□ -0.05
SNIP1-203ENST00000493916 RNASEKQ6P5S7 137 aaKnown RBP14.74□□□□□ -0.05
SNIP1-203ENST00000493916 LINC00862A6NCI5 91 aa14.73□□□□□ -0.05
SNIP1-203ENST00000493916 PRSS1P07477 247 aa14.73□□□□□ -0.05
SNIP1-203ENST00000493916 LINC01620Q4KN68 170 aa14.73□□□□□ -0.05
SNIP1-203ENST00000493916 F8W036 122 aa14.72□□□□□ -0.05
SNIP1-203ENST00000493916 IFITM2Q01629 132 aa14.72□□□□□ -0.05
SNIP1-203ENST00000493916 ATP5L2Q7Z4Y8 100 aa14.72□□□□□ -0.05
SNIP1-203ENST00000493916 CLRN3Q8NCR9 226 aa14.72□□□□□ -0.05
SNIP1-203ENST00000493916 C7orf77A4D0Y5 90 aa14.71□□□□□ -0.05
SNIP1-203ENST00000493916 Q5VSD8 79 aa14.71□□□□□ -0.05
SNIP1-203ENST00000493916 DGAT2L7PQ6IED9 249 aa14.71□□□□□ -0.05
SNIP1-203ENST00000493916 MRPL52Q86TS9 123 aaKnown RBP14.71□□□□□ -0.05
SNIP1-203ENST00000493916 TMEM101Q96IK0 257 aa14.71□□□□□ -0.05
SNIP1-203ENST00000493916 BTF3L4Q96K17 158 aa14.71□□□□□ -0.05
SNIP1-203ENST00000493916 VPS13BQ7Z7G8 4022 aa14.7□□□□□ -0.06
SNIP1-203ENST00000493916 TRBV24-1A0A075B6N3 115 aa14.7□□□□□ -0.06
SNIP1-203ENST00000493916 C20orf78Q9BR46 151 aa14.7□□□□□ -0.06
SNIP1-203ENST00000493916 SMR3BP02814 79 aaPredicted RBP14.69□□□□□ -0.06
SNIP1-203ENST00000493916 MT-ND4LP03901 98 aa14.69□□□□□ -0.06
SNIP1-203ENST00000493916 FCER1GP30273 86 aa14.69□□□□□ -0.06
SNIP1-203ENST00000493916 CKS2P33552 79 aa14.69□□□□□ -0.06
SNIP1-203ENST00000493916 RPL32P62910 135 aaKnown RBP14.69□□□□□ -0.06
SNIP1-203ENST00000493916 ANAPC16Q96DE5 110 aa14.69□□□□□ -0.06
SNIP1-203ENST00000493916 KIR2DL4Q99706 377 aa14.69□□□□□ -0.06
SNIP1-203ENST00000493916 IGKV3OR2-268A0A0C4DH90 116 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms