RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 RPL35AP18077 110 aaKnown RBP7.76□□□□□ -1.17
PHACTR4-204ENST00000493669 COTL1Q14019 142 aa7.76□□□□□ -1.17
PHACTR4-204ENST00000493669 MAPKAPK5-AS1Q8N8E1 139 aa7.76□□□□□ -1.17
PHACTR4-204ENST00000493669 DEFB104AQ8WTQ1 72 aa7.76□□□□□ -1.17
PHACTR4-204ENST00000493669 OVOL2Q9BRP0 275 aa7.76□□□□□ -1.17
PHACTR4-204ENST00000493669 SETD2Q9BYW2 2564 aaPredicted RBP7.76□□□□□ -1.17
PHACTR4-204ENST00000493669 H3BRM9 83 aa7.76□□□□□ -1.17
PHACTR4-204ENST00000493669 CHCHD7Q9BUK0 85 aa7.76□□□□□ -1.17
PHACTR4-204ENST00000493669 TM2D2Q9BX73 214 aa7.76□□□□□ -1.17
PHACTR4-204ENST00000493669 VCX2Q9H322 139 aa7.76□□□□□ -1.17
PHACTR4-204ENST00000493669 OTOGQ6ZRI0 2925 aa7.76□□□□□ -1.17
PHACTR4-204ENST00000493669 RRN3P1Q2M238 152 aa7.75□□□□□ -1.17
PHACTR4-204ENST00000493669 AMELXQ99217 191 aa7.75□□□□□ -1.17
PHACTR4-204ENST00000493669 SETXQ7Z333 2677 aaKnown RBP7.75□□□□□ -1.17
PHACTR4-204ENST00000493669 PLAC8L1A1L4L8 177 aa7.75□□□□□ -1.17
PHACTR4-204ENST00000493669 Q6ZTI0 123 aa7.75□□□□□ -1.17
PHACTR4-204ENST00000493669 CUBNO60494 3623 aa7.75□□□□□ -1.17
PHACTR4-204ENST00000493669 K7EQD1 137 aa7.75□□□□□ -1.17
PHACTR4-204ENST00000493669 TRBV7-3A0A075B6L6 115 aa7.74□□□□□ -1.17
PHACTR4-204ENST00000493669 RPL36AP83881 106 aaKnown RBP7.74□□□□□ -1.17
PHACTR4-204ENST00000493669 CEND1Q8N111 149 aa7.74□□□□□ -1.17
PHACTR4-204ENST00000493669 ZNRF2Q8NHG8 242 aa7.74□□□□□ -1.17
PHACTR4-204ENST00000493669 RPL36ALQ969Q0 106 aaKnown RBP7.74□□□□□ -1.17
PHACTR4-204ENST00000493669 TIMM21Q9BVV7 248 aa7.74□□□□□ -1.17
PHACTR4-204ENST00000493669 NOP10Q9NPE3 64 aaKnown RBP7.74□□□□□ -1.17
PHACTR4-204ENST00000493669 NOTCH2Q04721 2471 aa7.74□□□□□ -1.17
PHACTR4-204ENST00000493669 UBE2V1Q13404 147 aa7.74□□□□□ -1.17
PHACTR4-204ENST00000493669 ZNF479Q96JC4 524 aa7.74□□□□□ -1.17
PHACTR4-204ENST00000493669 CITED1Q99966 193 aa7.74□□□□□ -1.17
PHACTR4-204ENST00000493669 GCSHP23434 173 aa7.73□□□□□ -1.17
PHACTR4-204ENST00000493669 TMEM170BQ5T4T1 132 aa7.73□□□□□ -1.17
PHACTR4-204ENST00000493669 Q6ZVH6 145 aa7.73□□□□□ -1.17
PHACTR4-204ENST00000493669 DAZ4Q86SG3 579 aaKnown RBP7.73□□□□□ -1.17
PHACTR4-204ENST00000493669 DAZ3Q9NR90 486 aaKnown RBP7.73□□□□□ -1.17
PHACTR4-204ENST00000493669 UBE2D4Q9Y2X8 147 aa7.73□□□□□ -1.17
PHACTR4-204ENST00000493669 NSD1Q96L73 2696 aaPredicted RBP7.73□□□□□ -1.17
PHACTR4-204ENST00000493669 OPRPNQ99935 248 aaPredicted RBP7.73□□□□□ -1.17
PHACTR4-204ENST00000493669 Q9UF83 564 aa7.73□□□□□ -1.17
PHACTR4-204ENST00000493669 ZNF815PA8K554 130 aa7.72□□□□□ -1.17
PHACTR4-204ENST00000493669 MRPS36P82909 103 aaKnown RBP7.72□□□□□ -1.17
PHACTR4-204ENST00000493669 C9orf118A6NHY6 69 aa7.72□□□□□ -1.17
PHACTR4-204ENST00000493669 EMP1P54849 157 aa7.72□□□□□ -1.17
PHACTR4-204ENST00000493669 VAMP3Q15836 100 aa7.72□□□□□ -1.17
PHACTR4-204ENST00000493669 FAM104AQ969W3 186 aa7.72□□□□□ -1.17
PHACTR4-204ENST00000493669 TMEM223A0PJW6 202 aa7.72□□□□□ -1.17
PHACTR4-204ENST00000493669 SMAGPQ0VAQ4 97 aa7.72□□□□□ -1.17
PHACTR4-204ENST00000493669 C2CD3Q4AC94 2353 aa7.71□□□□□ -1.17
PHACTR4-204ENST00000493669 TRBV6-4A0A1B0GX49 114 aa7.71□□□□□ -1.17
PHACTR4-204ENST00000493669 LEPROTO15243 131 aa7.71□□□□□ -1.17
PHACTR4-204ENST00000493669 ZNF22P17026 224 aaPredicted RBP7.71□□□□□ -1.17
PHACTR4-204ENST00000493669 FXYD2P54710 66 aa7.71□□□□□ -1.17
PHACTR4-204ENST00000493669 PHLDA1Q8WV24 401 aaPredicted RBP7.71□□□□□ -1.17
PHACTR4-204ENST00000493669 HIST1H4GQ99525 98 aa7.71□□□□□ -1.17
PHACTR4-204ENST00000493669 TRGV2A0A075B6R0 118 aa7.71□□□□□ -1.18
PHACTR4-204ENST00000493669 SMIM9A6NGZ8 99 aa7.71□□□□□ -1.18
PHACTR4-204ENST00000493669 SMIM13P0DJ93 91 aa7.71□□□□□ -1.18
PHACTR4-204ENST00000493669 PTTG1IPP53801 180 aa7.71□□□□□ -1.18
PHACTR4-204ENST00000493669 UBE2D3P61077 147 aa7.71□□□□□ -1.18
PHACTR4-204ENST00000493669 UBE2D2P62837 147 aa7.71□□□□□ -1.18
PHACTR4-204ENST00000493669 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.71□□□□□ -1.18
PHACTR4-204ENST00000493669 FN1P02751 2386 aaKnown RBP7.71□□□□□ -1.18
PHACTR4-204ENST00000493669 SLC25A29Q8N8R3 303 aa7.7□□□□□ -1.18
PHACTR4-204ENST00000493669 PLEKHB2Q96CS7 222 aa7.7□□□□□ -1.18
PHACTR4-204ENST00000493669 IGHV3-38A0A0C4DH36 116 aa7.7□□□□□ -1.18
PHACTR4-204ENST00000493669 A0A0J9YXV3 536 aa7.7□□□□□ -1.18
PHACTR4-204ENST00000493669 KIR2DL5BQ8NHK3 375 aa7.7□□□□□ -1.18
PHACTR4-204ENST00000493669 CSDC2Q9Y534 153 aaKnown RBP7.7□□□□□ -1.18
PHACTR4-204ENST00000493669 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.7□□□□□ -1.18
PHACTR4-204ENST00000493669 TINCRA0A1B0GVN0 87 aa7.7□□□□□ -1.18
PHACTR4-204ENST00000493669 GAGE12BA1L429 117 aa7.7□□□□□ -1.18
PHACTR4-204ENST00000493669 IGKV2-29A2NJV5 120 aaPredicted RBP7.7□□□□□ -1.18
PHACTR4-204ENST00000493669 J3QQQ9 107 aa7.7□□□□□ -1.18
PHACTR4-204ENST00000493669 GAGE7O76087 117 aa7.7□□□□□ -1.18
PHACTR4-204ENST00000493669 GAGE12FP0CL80 117 aa7.7□□□□□ -1.18
PHACTR4-204ENST00000493669 GAGE12GP0CL81 117 aa7.7□□□□□ -1.18
PHACTR4-204ENST00000493669 GAGE12IP0CL82 117 aa7.7□□□□□ -1.18
PHACTR4-204ENST00000493669 LGALS3P17931 250 aaKnown RBP7.7□□□□□ -1.18
PHACTR4-204ENST00000493669 SCGB1D4Q6XE38 83 aa7.7□□□□□ -1.18
PHACTR4-204ENST00000493669 GTSF1LQ9H1H1 148 aa7.7□□□□□ -1.18
PHACTR4-204ENST00000493669 CCL25O15444 150 aa7.69□□□□□ -1.18
PHACTR4-204ENST00000493669 LINC00612Q8N6U2 182 aa7.69□□□□□ -1.18
PHACTR4-204ENST00000493669 SPANXB1Q9NS25 103 aaPredicted RBP7.69□□□□□ -1.18
PHACTR4-204ENST00000493669 JMJD1CQ15652 2540 aa7.68□□□□□ -1.18
PHACTR4-204ENST00000493669 WIPF1O43516 503 aa7.68□□□□□ -1.18
PHACTR4-204ENST00000493669 CEMP1Q6PRD7 247 aaPredicted RBP7.68□□□□□ -1.18
PHACTR4-204ENST00000493669 Q6ZUT4 128 aa7.68□□□□□ -1.18
PHACTR4-204ENST00000493669 WFDC9Q8NEX5 89 aa7.68□□□□□ -1.18
PHACTR4-204ENST00000493669 A0A0J9YY99 117 aa7.67□□□□□ -1.18
PHACTR4-204ENST00000493669 TMEM238LA0A1B0GVL6 79 aa7.67□□□□□ -1.18
PHACTR4-204ENST00000493669 A0A1B0GWB2 263 aa7.67□□□□□ -1.18
PHACTR4-204ENST00000493669 A6NJY4 79 aa7.67□□□□□ -1.18
PHACTR4-204ENST00000493669 TSPEAR-AS2P59090 65 aa7.67□□□□□ -1.18
PHACTR4-204ENST00000493669 AMMECR1LQ6DCA0 310 aa7.67□□□□□ -1.18
PHACTR4-204ENST00000493669 DGAT2L7PQ6IED9 249 aa7.67□□□□□ -1.18
PHACTR4-204ENST00000493669 OR5A1Q8NGJ0 315 aa7.67□□□□□ -1.18
PHACTR4-204ENST00000493669 TRGV4A0A0C4DH28 118 aa7.67□□□□□ -1.18
PHACTR4-204ENST00000493669 GAGE12JA6NER3 117 aa7.67□□□□□ -1.18
PHACTR4-204ENST00000493669 H7C423 109 aa7.67□□□□□ -1.18
PHACTR4-204ENST00000493669 GAGE4Q13068 117 aa7.67□□□□□ -1.18
PHACTR4-204ENST00000493669 GAGE5Q13069 117 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms