RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TRBV27A0A0K0K1C4 114 aa9.25□□□□□ -0.93
MSH6-208ENST00000493177 TMEM97Q5BJF2 176 aa9.25□□□□□ -0.93
MSH6-208ENST00000493177 LYPD5Q6UWN5 251 aa9.25□□□□□ -0.93
MSH6-208ENST00000493177 FA2HQ7L5A8 372 aa9.25□□□□□ -0.93
MSH6-208ENST00000493177 BAGE3Q86Y29 109 aa9.25□□□□□ -0.93
MSH6-208ENST00000493177 NXT2Q9NPJ8 142 aaKnown RBP9.25□□□□□ -0.93
MSH6-208ENST00000493177 PRSS47A8MTI9 375 aa9.24□□□□□ -0.93
MSH6-208ENST00000493177 TCAPO15273 167 aa9.24□□□□□ -0.93
MSH6-208ENST00000493177 AMTP48728 403 aa9.24□□□□□ -0.93
MSH6-208ENST00000493177 ESRGQ1W209 222 aa9.24□□□□□ -0.93
MSH6-208ENST00000493177 LINC00336Q6ZUF6 198 aa9.24□□□□□ -0.93
MSH6-208ENST00000493177 TRBV25-1A0A075B6N4 114 aa9.23□□□□□ -0.93
MSH6-208ENST00000493177 IGHV1-24A0A0C4DH33 117 aa9.23□□□□□ -0.93
MSH6-208ENST00000493177 TSHBP01222 138 aa9.23□□□□□ -0.93
MSH6-208ENST00000493177 RAB5BP61020 215 aa9.23□□□□□ -0.93
MSH6-208ENST00000493177 RNASEKQ6P5S7 137 aaKnown RBP9.23□□□□□ -0.93
MSH6-208ENST00000493177 TRBV6-8A0A0A6YYG3 113 aa9.22□□□□□ -0.93
MSH6-208ENST00000493177 HIST1H2BKO60814 126 aa9.22□□□□□ -0.93
MSH6-208ENST00000493177 HIST1H2BJP06899 126 aa9.22□□□□□ -0.93
MSH6-208ENST00000493177 HIST1H2BOP23527 126 aa9.22□□□□□ -0.93
MSH6-208ENST00000493177 HIST1H2BBP33778 126 aa9.22□□□□□ -0.93
MSH6-208ENST00000493177 HIST1H2BDP58876 126 aa9.22□□□□□ -0.93
MSH6-208ENST00000493177 HIST1H2BCP62807 126 aa9.22□□□□□ -0.93
MSH6-208ENST00000493177 HIST2H2BEQ16778 126 aa9.22□□□□□ -0.93
MSH6-208ENST00000493177 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.22□□□□□ -0.93
MSH6-208ENST00000493177 LELP1Q5T871 98 aa9.22□□□□□ -0.93
MSH6-208ENST00000493177 NTM-AS1Q6ZSK4 140 aa9.22□□□□□ -0.93
MSH6-208ENST00000493177 NIT1Q86X76 327 aa9.22□□□□□ -0.93
MSH6-208ENST00000493177 HIST1H2BHQ93079 126 aa9.22□□□□□ -0.93
MSH6-208ENST00000493177 HIST1H2BNQ99877 126 aa9.22□□□□□ -0.93
MSH6-208ENST00000493177 HIST1H2BMQ99879 126 aa9.22□□□□□ -0.93
MSH6-208ENST00000493177 DNAH6Q9C0G6 4158 aa9.22□□□□□ -0.93
MSH6-208ENST00000493177 TRAV8-6A0A0B4J262 113 aa9.21□□□□□ -0.94
MSH6-208ENST00000493177 UBE2L6O14933 153 aa9.21□□□□□ -0.94
MSH6-208ENST00000493177 LINC00614P0C842 121 aa9.21□□□□□ -0.94
MSH6-208ENST00000493177 TIRAPP58753 221 aa9.21□□□□□ -0.94
MSH6-208ENST00000493177 Q0VG73 95 aa9.21□□□□□ -0.94
MSH6-208ENST00000493177 LAGE3Q14657 143 aa9.21□□□□□ -0.94
MSH6-208ENST00000493177 CHCHD5Q9BSY4 110 aa9.21□□□□□ -0.94
MSH6-208ENST00000493177 TMEM243Q9BU79 118 aa9.21□□□□□ -0.94
MSH6-208ENST00000493177 LINC00588Q9Y4M8 146 aa9.21□□□□□ -0.94
MSH6-208ENST00000493177 BIRC6Q9NR09 4857 aa9.2□□□□□ -0.94
MSH6-208ENST00000493177 VPS13DQ5THJ4 4388 aa9.2□□□□□ -0.94
MSH6-208ENST00000493177 PRSS29PA6NIE9 313 aa9.2□□□□□ -0.94
MSH6-208ENST00000493177 ORMDL2Q53FV1 153 aa9.2□□□□□ -0.94
MSH6-208ENST00000493177 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.19□□□□□ -0.94
MSH6-208ENST00000493177 IGKV2-29A2NJV5 120 aaPredicted RBP9.19□□□□□ -0.94
MSH6-208ENST00000493177 TMEM262E9PQX1 116 aa9.19□□□□□ -0.94
MSH6-208ENST00000493177 K7EMI3 77 aa9.19□□□□□ -0.94
MSH6-208ENST00000493177 NDUFA6P56556 154 aa9.19□□□□□ -0.94
MSH6-208ENST00000493177 GAGE6Q13070 117 aa9.19□□□□□ -0.94
MSH6-208ENST00000493177 C1orf134Q5TEV5 83 aa9.19□□□□□ -0.94
MSH6-208ENST00000493177 URB1-AS1Q96HZ7 61 aa9.19□□□□□ -0.94
MSH6-208ENST00000493177 CHCHD7Q9BUK0 85 aa9.19□□□□□ -0.94
MSH6-208ENST00000493177 AP5S1Q9NUS5 200 aa9.19□□□□□ -0.94
MSH6-208ENST00000493177 MRPS16Q9Y3D3 137 aaKnown RBP9.19□□□□□ -0.94
MSH6-208ENST00000493177 SERF1AO75920 110 aa9.18□□□□□ -0.94
MSH6-208ENST00000493177 BTF3P20290 206 aaKnown RBP9.18□□□□□ -0.94
MSH6-208ENST00000493177 TMEM18Q96B42 140 aa9.18□□□□□ -0.94
MSH6-208ENST00000493177 CHCHD1Q96BP2 118 aaKnown RBP9.18□□□□□ -0.94
MSH6-208ENST00000493177 HSBP1O75506 76 aa9.17□□□□□ -0.94
MSH6-208ENST00000493177 ESDP10768 282 aa9.17□□□□□ -0.94
MSH6-208ENST00000493177 WFDC10BQ8IUB3 73 aa9.17□□□□□ -0.94
MSH6-208ENST00000493177 NBDYA0A0U1RRE5 68 aa9.16□□□□□ -0.94
MSH6-208ENST00000493177 LINC01546A6NGU7 62 aa9.16□□□□□ -0.94
MSH6-208ENST00000493177 RTL8CO15255 209 aa9.16□□□□□ -0.94
MSH6-208ENST00000493177 G0S2P27469 103 aa9.16□□□□□ -0.94
MSH6-208ENST00000493177 PMCHL1Q16048 86 aa9.16□□□□□ -0.94
MSH6-208ENST00000493177 AMMECR1LQ6DCA0 310 aa9.16□□□□□ -0.94
MSH6-208ENST00000493177 Q6ZR54 194 aa9.16□□□□□ -0.94
MSH6-208ENST00000493177 C20orf203Q8NBC4 194 aa9.16□□□□□ -0.94
MSH6-208ENST00000493177 A0A087WX48 190 aa9.15□□□□□ -0.94
MSH6-208ENST00000493177 S100A6P06703 90 aa9.15□□□□□ -0.94
MSH6-208ENST00000493177 PKIAP61925 76 aa9.15□□□□□ -0.94
MSH6-208ENST00000493177 RPL39P62891 51 aaKnown RBP9.15□□□□□ -0.94
MSH6-208ENST00000493177 SMAGPQ0VAQ4 97 aa9.15□□□□□ -0.94
MSH6-208ENST00000493177 TTC32Q5I0X7 151 aa9.15□□□□□ -0.94
MSH6-208ENST00000493177 C2orf66Q6UXQ4 117 aa9.15□□□□□ -0.94
MSH6-208ENST00000493177 UPK3BQ9BT76 320 aa9.15□□□□□ -0.94
MSH6-208ENST00000493177 Q9H8V8 135 aa9.15□□□□□ -0.94
MSH6-208ENST00000493177 CYSLTR1Q9Y271 337 aa9.15□□□□□ -0.94
MSH6-208ENST00000493177 H7C423 109 aa9.14□□□□□ -0.95
MSH6-208ENST00000493177 SIVA1O15304 175 aa9.14□□□□□ -0.95
MSH6-208ENST00000493177 IGHV3-30P01768 117 aa9.14□□□□□ -0.95
MSH6-208ENST00000493177 IGHV3-33P01772 117 aa9.14□□□□□ -0.95
MSH6-208ENST00000493177 HBDP02042 147 aa9.14□□□□□ -0.95
MSH6-208ENST00000493177 IGHV3-30-3P0DP02 117 aa9.14□□□□□ -0.95
MSH6-208ENST00000493177 IGHV3-30-5P0DP03 117 aa9.14□□□□□ -0.95
MSH6-208ENST00000493177 FGF6P10767 208 aa9.14□□□□□ -0.95
MSH6-208ENST00000493177 DGAT2L7PQ6IED9 249 aa9.14□□□□□ -0.95
MSH6-208ENST00000493177 C6orf223Q8N319 242 aa9.14□□□□□ -0.95
MSH6-208ENST00000493177 TMEM101Q96IK0 257 aa9.14□□□□□ -0.95
MSH6-208ENST00000493177 TMA7Q9Y2S6 64 aaKnown RBP9.14□□□□□ -0.95
MSH6-208ENST00000493177 NUPR1O60356 82 aa9.13□□□□□ -0.95
MSH6-208ENST00000493177 LINC00310P59036 64 aa9.13□□□□□ -0.95
MSH6-208ENST00000493177 MPV17L2Q567V2 206 aa9.13□□□□□ -0.95
MSH6-208ENST00000493177 FAM19A2Q8N3H0 131 aa9.13□□□□□ -0.95
MSH6-208ENST00000493177 DNAH10Q8IVF4 4471 aa9.13□□□□□ -0.95
MSH6-208ENST00000493177 RBX1P62877 108 aa9.12□□□□□ -0.95
MSH6-208ENST00000493177 Q8N3U1 123 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms