RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.88□□□□□ -0.51
CHD1L-209ENST00000492728 XKRY2A2RUG3 117 aa11.87□□□□□ -0.51
CHD1L-209ENST00000492728 TRGC1P0CF51 173 aa11.87□□□□□ -0.51
CHD1L-209ENST00000492728 TMEM243Q9BU79 118 aa11.87□□□□□ -0.51
CHD1L-209ENST00000492728 TRAV26-2A0A0B4J265 109 aa11.86□□□□□ -0.51
CHD1L-209ENST00000492728 C9orf163Q8N9P6 203 aa11.86□□□□□ -0.51
CHD1L-209ENST00000492728 OCC1Q8TAD7 63 aa11.86□□□□□ -0.51
CHD1L-209ENST00000492728 PGLYRP4Q96LB8 373 aa11.86□□□□□ -0.51
CHD1L-209ENST00000492728 RPP21Q9H633 154 aaKnown RBP11.86□□□□□ -0.51
CHD1L-209ENST00000492728 NIT2Q9NQR4 276 aa11.86□□□□□ -0.51
CHD1L-209ENST00000492728 GATD1Q8NB37 220 aa11.85□□□□□ -0.51
CHD1L-209ENST00000492728 GTSF1Q8WW33 167 aa11.85□□□□□ -0.51
CHD1L-209ENST00000492728 BIN3Q9NQY0 253 aa11.85□□□□□ -0.51
CHD1L-209ENST00000492728 A0A1B0GUV1 79 aa11.84□□□□□ -0.51
CHD1L-209ENST00000492728 HNRNPA3P51991 378 aaKnown RBP11.84□□□□□ -0.51
CHD1L-209ENST00000492728 FOXA3P55318 350 aaPredicted RBP11.84□□□□□ -0.51
CHD1L-209ENST00000492728 TWIST1Q15672 202 aa11.84□□□□□ -0.51
CHD1L-209ENST00000492728 DGAT2L7PQ6IED9 249 aa11.84□□□□□ -0.51
CHD1L-209ENST00000492728 WDR73Q6P4I2 378 aa11.84□□□□□ -0.51
CHD1L-209ENST00000492728 SLPIP03973 132 aa11.83□□□□□ -0.52
CHD1L-209ENST00000492728 SDIM1Q6ZPB5 146 aa11.83□□□□□ -0.52
CHD1L-209ENST00000492728 RPL39LQ96EH5 51 aaKnown RBP11.83□□□□□ -0.52
CHD1L-209ENST00000492728 AMTP48728 403 aa11.82□□□□□ -0.52
CHD1L-209ENST00000492728 LCE2BO14633 110 aa11.81□□□□□ -0.52
CHD1L-209ENST00000492728 TAGLN2P37802 199 aaKnown RBP11.81□□□□□ -0.52
CHD1L-209ENST00000492728 CNBPP62633 177 aaKnown RBP11.81□□□□□ -0.52
CHD1L-209ENST00000492728 COTL1Q14019 142 aa11.81□□□□□ -0.52
CHD1L-209ENST00000492728 TRAV8-4A0A0B4J246 113 aa11.8□□□□□ -0.52
CHD1L-209ENST00000492728 hDV102S1A0JD36 115 aa11.8□□□□□ -0.52
CHD1L-209ENST00000492728 RPL37AP61513 92 aaKnown RBP11.8□□□□□ -0.52
CHD1L-209ENST00000492728 ALKAL2Q6UX46 152 aa11.8□□□□□ -0.52
CHD1L-209ENST00000492728 CLRN3Q8NCR9 226 aa11.79□□□□□ -0.52
CHD1L-209ENST00000492728 UBE2L6O14933 153 aa11.78□□□□□ -0.52
CHD1L-209ENST00000492728 CIRBPQ14011 172 aaKnown RBP11.78□□□□□ -0.52
CHD1L-209ENST00000492728 C15orf56Q8N910 161 aa11.78□□□□□ -0.52
CHD1L-209ENST00000492728 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.77□□□□□ -0.53
CHD1L-209ENST00000492728 IGKV2-29A2NJV5 120 aaPredicted RBP11.77□□□□□ -0.53
CHD1L-209ENST00000492728 GAS8-AS1O95177 125 aa11.77□□□□□ -0.53
CHD1L-209ENST00000492728 CHTF8P0CG12 524 aa11.77□□□□□ -0.53
CHD1L-209ENST00000492728 AKAP14Q86UN6 197 aa11.77□□□□□ -0.53
CHD1L-209ENST00000492728 LYPD6BQ8NI32 183 aa11.77□□□□□ -0.53
CHD1L-209ENST00000492728 IGKV3OR2-268A0A0C4DH90 116 aa11.76□□□□□ -0.53
CHD1L-209ENST00000492728 TMEM250H0YL14 139 aa11.76□□□□□ -0.53
CHD1L-209ENST00000492728 GAGE12HA6NDE8 117 aa11.75□□□□□ -0.53
CHD1L-209ENST00000492728 GATCO43716 136 aaKnown RBP11.75□□□□□ -0.53
CHD1L-209ENST00000492728 FAM231DQ6ZW35 169 aa11.75□□□□□ -0.53
CHD1L-209ENST00000492728 OXTP01178 125 aa11.74□□□□□ -0.53
CHD1L-209ENST00000492728 SDHAF1A6NFY7 115 aa11.73□□□□□ -0.53
CHD1L-209ENST00000492728 CEBPGP53567 150 aa11.73□□□□□ -0.53
CHD1L-209ENST00000492728 BLOC1S1P78537 153 aa11.73□□□□□ -0.53
CHD1L-209ENST00000492728 IGHV3-64A0A075B6Q5 118 aa11.72□□□□□ -0.53
CHD1L-209ENST00000492728 FAM231BA6NCW3 169 aa11.72□□□□□ -0.53
CHD1L-209ENST00000492728 NCR2O95944 276 aa11.72□□□□□ -0.53
CHD1L-209ENST00000492728 APCSP02743 223 aa11.72□□□□□ -0.53
CHD1L-209ENST00000492728 HIGD2BQ4VC39 106 aa11.72□□□□□ -0.53
CHD1L-209ENST00000492728 SPACA4Q8TDM5 124 aa11.72□□□□□ -0.53
CHD1L-209ENST00000492728 CHCHD10Q8WYQ3 142 aaPredicted RBP11.72□□□□□ -0.53
CHD1L-209ENST00000492728 A8MWL6 223 aa11.71□□□□□ -0.53
CHD1L-209ENST00000492728 FGF6P10767 208 aa11.71□□□□□ -0.53
CHD1L-209ENST00000492728 CT83Q5H943 113 aa11.71□□□□□ -0.53
CHD1L-209ENST00000492728 AP5S1Q9NUS5 200 aa11.71□□□□□ -0.53
CHD1L-209ENST00000492728 A0A087WYN8 130 aa11.7□□□□□ -0.54
CHD1L-209ENST00000492728 AMMECR1LQ6DCA0 310 aa11.7□□□□□ -0.54
CHD1L-209ENST00000492728 RNASEKQ6P5S7 137 aaKnown RBP11.7□□□□□ -0.54
CHD1L-209ENST00000492728 SMIM15Q7Z3B0 74 aa11.7□□□□□ -0.54
CHD1L-209ENST00000492728 LINC01551Q86U37 167 aa11.7□□□□□ -0.54
CHD1L-209ENST00000492728 RNF185Q96GF1 192 aa11.7□□□□□ -0.54
CHD1L-209ENST00000492728 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.69□□□□□ -0.54
CHD1L-209ENST00000492728 TRBV6-5A0A0K0K1A5 114 aa11.69□□□□□ -0.54
CHD1L-209ENST00000492728 TSHBP01222 138 aa11.69□□□□□ -0.54
CHD1L-209ENST00000492728 RPS10P46783 165 aaKnown RBP11.69□□□□□ -0.54
CHD1L-209ENST00000492728 FOXI1Q12951 378 aa11.69□□□□□ -0.54
CHD1L-209ENST00000492728 TMEM242Q9NWH2 141 aa11.69□□□□□ -0.54
CHD1L-209ENST00000492728 ESDP10768 282 aa11.68□□□□□ -0.54
CHD1L-209ENST00000492728 SMIM7Q9BQ49 75 aa11.68□□□□□ -0.54
CHD1L-209ENST00000492728 HIGD1CA8MV81 97 aa11.67□□□□□ -0.54
CHD1L-209ENST00000492728 H7C423 109 aa11.67□□□□□ -0.54
CHD1L-209ENST00000492728 I3L3M4 83 aa11.67□□□□□ -0.54
CHD1L-209ENST00000492728 SRP19P09132 144 aaKnown RBP11.67□□□□□ -0.54
CHD1L-209ENST00000492728 TEX261Q6UWH6 196 aa11.67□□□□□ -0.54
CHD1L-209ENST00000492728 TSKUQ8WUA8 353 aa11.67□□□□□ -0.54
CHD1L-209ENST00000492728 FAM210AQ96ND0 272 aa11.67□□□□□ -0.54
CHD1L-209ENST00000492728 UBR4Q5T4S7 5183 aa11.66□□□□□ -0.54
CHD1L-209ENST00000492728 GVQW2A0A096LPI5 108 aaPredicted RBP11.66□□□□□ -0.54
CHD1L-209ENST00000492728 MT1HL1P0DM35 61 aa11.66□□□□□ -0.54
CHD1L-209ENST00000492728 COX6A2Q02221 97 aa11.66□□□□□ -0.54
CHD1L-209ENST00000492728 PRSS3P2Q8NHM4 247 aa11.66□□□□□ -0.54
CHD1L-209ENST00000492728 EIF5A2Q9GZV4 153 aaKnown RBP11.66□□□□□ -0.54
CHD1L-209ENST00000492728 PLAC8Q9NZF1 115 aa11.66□□□□□ -0.54
CHD1L-209ENST00000492728 A0A1B0GUT8 65 aa11.65□□□□□ -0.54
CHD1L-209ENST00000492728 RAB4AP20338 218 aa11.65□□□□□ -0.54
CHD1L-209ENST00000492728 PMCHP20382 165 aa11.65□□□□□ -0.54
CHD1L-209ENST00000492728 CFAP161Q6P656 301 aa11.65□□□□□ -0.54
CHD1L-209ENST00000492728 AMN1Q8IY45 258 aa11.65□□□□□ -0.54
CHD1L-209ENST00000492728 OR5A1Q8NGJ0 315 aa11.65□□□□□ -0.54
CHD1L-209ENST00000492728 TMEM191AQ9H0A3 160 aa11.65□□□□□ -0.54
CHD1L-209ENST00000492728 V9GYV3 84 aa11.65□□□□□ -0.54
CHD1L-209ENST00000492728 ZNF727A8MUV8 499 aa11.64□□□□□ -0.55
CHD1L-209ENST00000492728 SMKR1H3BMG3 65 aa11.64□□□□□ -0.55
CHD1L-209ENST00000492728 ZNF25P17030 456 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms