RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 I3L3M4 83 aa9.05□□□□□ -0.96
HMGN1-220ENST00000492280 YAE1D1Q9NRH1 226 aa9.05□□□□□ -0.96
HMGN1-220ENST00000492280 A8MZ25 164 aa9.04□□□□□ -0.96
HMGN1-220ENST00000492280 H3BMG7 143 aa9.04□□□□□ -0.96
HMGN1-220ENST00000492280 RPL32P62910 135 aaKnown RBP9.04□□□□□ -0.96
HMGN1-220ENST00000492280 IGLV4-3A0A075B6K6 122 aa9.04□□□□□ -0.96
HMGN1-220ENST00000492280 CFAP126Q5VTH2 177 aa9.04□□□□□ -0.96
HMGN1-220ENST00000492280 KRTAP1-1Q07627 177 aa9.03□□□□□ -0.96
HMGN1-220ENST00000492280 NSUN5P1Q3KNT7 163 aa9.03□□□□□ -0.96
HMGN1-220ENST00000492280 C11orf72Q8NBR9 251 aa9.03□□□□□ -0.96
HMGN1-220ENST00000492280 M0R2P5 195 aa9.03□□□□□ -0.96
HMGN1-220ENST00000492280 CCL24O00175 119 aa9.03□□□□□ -0.96
HMGN1-220ENST00000492280 PCP4P48539 62 aa9.03□□□□□ -0.96
HMGN1-220ENST00000492280 FAM104AQ969W3 186 aa9.03□□□□□ -0.96
HMGN1-220ENST00000492280 NSD1Q96L73 2696 aaPredicted RBP9.03□□□□□ -0.96
HMGN1-220ENST00000492280 TRAV8-3A0A0A6YYJ7 113 aa9.03□□□□□ -0.96
HMGN1-220ENST00000492280 PLA2G2AP14555 144 aa9.03□□□□□ -0.96
HMGN1-220ENST00000492280 ZNF415Q09FC8 603 aa9.03□□□□□ -0.96
HMGN1-220ENST00000492280 TMEM141Q96I45 108 aa9.03□□□□□ -0.96
HMGN1-220ENST00000492280 PGPEP1Q9NXJ5 209 aa9.03□□□□□ -0.96
HMGN1-220ENST00000492280 TNFRSF18Q9Y5U5 241 aa9.03□□□□□ -0.96
HMGN1-220ENST00000492280 A0A0J9YY99 117 aa9.02□□□□□ -0.97
HMGN1-220ENST00000492280 LINC01549A6NIU2 74 aa9.02□□□□□ -0.97
HMGN1-220ENST00000492280 SPXQ9BT56 116 aa9.02□□□□□ -0.97
HMGN1-220ENST00000492280 J3QKU1 62 aa9.02□□□□□ -0.97
HMGN1-220ENST00000492280 INSP01308 110 aa9.02□□□□□ -0.97
HMGN1-220ENST00000492280 ZNF22P17026 224 aaPredicted RBP9.02□□□□□ -0.97
HMGN1-220ENST00000492280 HERVK_113P61574 105 aa9.02□□□□□ -0.97
HMGN1-220ENST00000492280 RPL24P83731 157 aaKnown RBP9.02□□□□□ -0.97
HMGN1-220ENST00000492280 STHQ8IWL8 128 aa9.02□□□□□ -0.97
HMGN1-220ENST00000492280 TRGV1A0A0A0MS02 117 aa9.01□□□□□ -0.97
HMGN1-220ENST00000492280 J3QQQ9 107 aa9.01□□□□□ -0.97
HMGN1-220ENST00000492280 VCX2Q9H322 139 aa9.01□□□□□ -0.97
HMGN1-220ENST00000492280 CBY1Q9Y3M2 126 aa9.01□□□□□ -0.97
HMGN1-220ENST00000492280 RHOHQ15669 191 aa9.01□□□□□ -0.97
HMGN1-220ENST00000492280 C1orf158Q8N1D5 194 aa9.01□□□□□ -0.97
HMGN1-220ENST00000492280 AMELXQ99217 191 aa9.01□□□□□ -0.97
HMGN1-220ENST00000492280 LINC00467Q9BRT7 94 aa9.01□□□□□ -0.97
HMGN1-220ENST00000492280 RPL35AP18077 110 aaKnown RBP9□□□□□ -0.97
HMGN1-220ENST00000492280 WFDC2Q14508 124 aa9□□□□□ -0.97
HMGN1-220ENST00000492280 LINC01006Q8NI28 216 aa9□□□□□ -0.97
HMGN1-220ENST00000492280 TRAV2A0A0B4J234 112 aa9□□□□□ -0.97
HMGN1-220ENST00000492280 LGALS3P17931 250 aaKnown RBP9□□□□□ -0.97
HMGN1-220ENST00000492280 RRN3P1Q2M238 152 aa9□□□□□ -0.97
HMGN1-220ENST00000492280 Q6ZTI0 123 aa9□□□□□ -0.97
HMGN1-220ENST00000492280 Q6ZUT4 128 aa9□□□□□ -0.97
HMGN1-220ENST00000492280 TEX48A0A1B0GUV7 120 aa8.99□□□□□ -0.97
HMGN1-220ENST00000492280 A8MTW9 85 aa8.99□□□□□ -0.97
HMGN1-220ENST00000492280 NPC2P61916 151 aa8.99□□□□□ -0.97
HMGN1-220ENST00000492280 SH2D6Q7Z4S9 175 aa8.99□□□□□ -0.97
HMGN1-220ENST00000492280 LOC107984156A0A0G2JMH3 177 aa8.99□□□□□ -0.97
HMGN1-220ENST00000492280 RHODO00212 210 aa8.99□□□□□ -0.97
HMGN1-220ENST00000492280 NDUFA7O95182 113 aa8.99□□□□□ -0.97
HMGN1-220ENST00000492280 TAL2Q16559 108 aa8.99□□□□□ -0.97
HMGN1-220ENST00000492280 ARL17AQ8IVW1 177 aa8.99□□□□□ -0.97
HMGN1-220ENST00000492280 A8MWV9 139 aa8.98□□□□□ -0.97
HMGN1-220ENST00000492280 H7C2G1 150 aa8.98□□□□□ -0.97
HMGN1-220ENST00000492280 CHCHD7Q9BUK0 85 aa8.98□□□□□ -0.97
HMGN1-220ENST00000492280 TMEM223A0PJW6 202 aa8.98□□□□□ -0.97
HMGN1-220ENST00000492280 FHL3Q13643 280 aa8.98□□□□□ -0.97
HMGN1-220ENST00000492280 OR5A1Q8NGJ0 315 aa8.98□□□□□ -0.97
HMGN1-220ENST00000492280 SPINK8P0C7L1 97 aa8.97□□□□□ -0.97
HMGN1-220ENST00000492280 HIVEP1P15822 2718 aa8.97□□□□□ -0.97
HMGN1-220ENST00000492280 K7ERU9 68 aa8.97□□□□□ -0.97
HMGN1-220ENST00000492280 TSPAN13O95857 204 aa8.97□□□□□ -0.97
HMGN1-220ENST00000492280 C10orf126Q8N4M7 172 aa8.97□□□□□ -0.97
HMGN1-220ENST00000492280 ETDBQ3ZM63 59 aa8.96□□□□□ -0.97
HMGN1-220ENST00000492280 PAPPA-AS1Q5QFB9 102 aa8.96□□□□□ -0.97
HMGN1-220ENST00000492280 NFE4Q86UQ8 179 aa8.96□□□□□ -0.97
HMGN1-220ENST00000492280 EIF4EBP3O60516 100 aaPredicted RBP8.96□□□□□ -0.98
HMGN1-220ENST00000492280 IGHV3-30P01768 117 aa8.96□□□□□ -0.98
HMGN1-220ENST00000492280 IGHV3-30-5P0DP03 117 aa8.96□□□□□ -0.98
HMGN1-220ENST00000492280 TMEM86BQ8N661 226 aa8.96□□□□□ -0.98
HMGN1-220ENST00000492280 NOP10Q9NPE3 64 aaKnown RBP8.96□□□□□ -0.98
HMGN1-220ENST00000492280 LINC00694P0DN24 101 aa8.96□□□□□ -0.98
HMGN1-220ENST00000492280 UBE2D4Q9Y2X8 147 aa8.96□□□□□ -0.98
HMGN1-220ENST00000492280 IGHV3-30-3P0DP02 117 aa8.95□□□□□ -0.98
HMGN1-220ENST00000492280 INSL3P51460 131 aa8.95□□□□□ -0.98
HMGN1-220ENST00000492280 FLNBO75369 2602 aaKnown RBP8.95□□□□□ -0.98
HMGN1-220ENST00000492280 A0A1B0GWB2 263 aa8.95□□□□□ -0.98
HMGN1-220ENST00000492280 UBE2D1P51668 147 aa8.95□□□□□ -0.98
HMGN1-220ENST00000492280 LOC100131303A0A0U1RQF7 123 aa8.94□□□□□ -0.98
HMGN1-220ENST00000492280 GIG44P09565 113 aaPredicted RBP8.94□□□□□ -0.98
HMGN1-220ENST00000492280 CFC1BP0CG36 223 aa8.94□□□□□ -0.98
HMGN1-220ENST00000492280 CFC1P0CG37 223 aa8.94□□□□□ -0.98
HMGN1-220ENST00000492280 NDUFA11Q86Y39 141 aa8.94□□□□□ -0.98
HMGN1-220ENST00000492280 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.94□□□□□ -0.98
HMGN1-220ENST00000492280 SLC25A29Q8N8R3 303 aa8.94□□□□□ -0.98
HMGN1-220ENST00000492280 DAND5Q8N907 189 aa8.94□□□□□ -0.98
HMGN1-220ENST00000492280 A4D1N5 150 aa8.94□□□□□ -0.98
HMGN1-220ENST00000492280 PSMB2P49721 201 aa8.94□□□□□ -0.98
HMGN1-220ENST00000492280 COTL1Q14019 142 aa8.94□□□□□ -0.98
HMGN1-220ENST00000492280 ZNF418Q8TF45 676 aaPredicted RBP8.94□□□□□ -0.98
HMGN1-220ENST00000492280 TIMM21Q9BVV7 248 aa8.94□□□□□ -0.98
HMGN1-220ENST00000492280 GAGE12JA6NER3 117 aa8.93□□□□□ -0.98
HMGN1-220ENST00000492280 LEPROTO15243 131 aa8.93□□□□□ -0.98
HMGN1-220ENST00000492280 GAGE4Q13068 117 aa8.93□□□□□ -0.98
HMGN1-220ENST00000492280 GAGE5Q13069 117 aa8.93□□□□□ -0.98
HMGN1-220ENST00000492280 GAGE13Q4V321 117 aa8.93□□□□□ -0.98
HMGN1-220ENST00000492280 TSSC4Q9Y5U2 329 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms