RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 BLCAPP62952 87 aa2.76□□□□□ -1.97
ATPAF1-206ENST00000492233 HERVK_113P63121 156 aa2.76□□□□□ -1.97
ATPAF1-206ENST00000492233 REG3AQ06141 175 aa2.76□□□□□ -1.97
ATPAF1-206ENST00000492233 HSD52Q0P140 79 aa2.76□□□□□ -1.97
ATPAF1-206ENST00000492233 SPANXN1Q5VSR9 72 aa2.76□□□□□ -1.97
ATPAF1-206ENST00000492233 REG3GQ6UW15 175 aa2.76□□□□□ -1.97
ATPAF1-206ENST00000492233 GTF2H5Q6ZYL4 71 aa2.76□□□□□ -1.97
ATPAF1-206ENST00000492233 LINC00337Q8N6G1 96 aa2.76□□□□□ -1.97
ATPAF1-206ENST00000492233 POM121L12Q8N7R1 296 aa2.76□□□□□ -1.97
ATPAF1-206ENST00000492233 WWC2-AS2Q96NR7 200 aa2.76□□□□□ -1.97
ATPAF1-206ENST00000492233 ODF3Q96PU9 254 aa2.76□□□□□ -1.97
ATPAF1-206ENST00000492233 C20orf78Q9BR46 151 aa2.76□□□□□ -1.97
ATPAF1-206ENST00000492233 RHPN1-AS1Q9BWJ2 59 aa2.76□□□□□ -1.97
ATPAF1-206ENST00000492233 DPH3P1Q9H4G8 78 aa2.76□□□□□ -1.97
ATPAF1-206ENST00000492233 HIGD1BQ9P298 99 aa2.76□□□□□ -1.97
ATPAF1-206ENST00000492233 TRAV12-1A0A0B4J245 112 aa2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 DNAJC9-AS1A6NH13 148 aa2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 H3BRM9 83 aa2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 PPP1R17O96001 155 aa2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 FSHBP01225 129 aa2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 IGKCP01834 107 aa2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 SCGB1C2P0DMR2 95 aa2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 RNASE3P12724 160 aaKnown RBP2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 PSMB8P28062 276 aa2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 ORMDL2Q53FV1 153 aa2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 C10orf25Q5T742 122 aa2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 Q6ZQT7 251 aa2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 TRPT1Q86TN4 253 aaKnown RBP2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 MYOZ3Q8TDC0 251 aa2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 PRAC1Q96KF2 57 aa2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 C18orf15Q96N68 181 aa2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 SMIM2Q9BVW6 85 aa2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 C11orf68Q9H3H3 251 aaKnown RBP2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 HHLA3Q9XRX5 114 aa2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 CACNA1BQ00975 2339 aa2.75□□□□□ -1.97
ATPAF1-206ENST00000492233 NCOR2Q9Y618 2525 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 A0A087WW49 117 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 IGHV6-1A0A0B4J1U7 121 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 C7orf71A4D174 169 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 LINC01549A6NIU2 74 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 J3QQQ9 107 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 LGALS9O00182 355 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 APOMO95445 188 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 S100A4P26447 101 aaKnown RBP2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 RNASE4P34096 147 aaKnown RBP2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 SYNJ2BPP57105 145 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 LINC00315P59091 139 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 DEFB1P60022 68 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 DEFB112Q30KQ8 113 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 Q6Q795 121 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 LCNL1Q6ZST4 164 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 PCP2Q8IVA1 136 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 TMEM61Q8N0U2 210 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 DCANP1Q8TF63 244 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 TOMM6Q96B49 74 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 GTSF1LQ9H1H1 148 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 MRPL35Q9NZE8 188 aaKnown RBP2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 PHLDA3Q9Y5J5 127 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 ZNF706Q9Y5V0 76 aaPredicted RBP2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 KIF25-AS1Q9Y6Z4 181 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 ABCA2Q9BZC7 2435 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 AKAP6Q13023 2319 aa2.74□□□□□ -1.97
ATPAF1-206ENST00000492233 IGKV2D-26A0A0A0MRZ7 120 aa2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 IGHV3-16A0A0C4DH30 117 aa2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 A0A0J9YX75 114 aa2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 TRBV6-5A0A0K0K1A5 114 aa2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 F8VRH5 84 aa2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 GNRH2O43555 120 aa2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 KALRNO60229 2985 aa2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 DUSP14O95147 198 aaKnown RBP2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 MGPP08493 103 aa2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 LINC00694P0DN24 101 aa2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 PLNP26678 52 aa2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 NMUP48645 174 aa2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 POLR2KP53803 58 aaKnown RBP2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 ZC2HC1BQ5TFG8 222 aa2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 AMMECR1LQ6DCA0 310 aa2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 Q6ZRP5 223 aa2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 Q8N2B8 174 aa2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 C14orf178Q8N769 122 aaPredicted RBP2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 RPL39LQ96EH5 51 aaKnown RBP2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 KRTAP9-2Q9BYQ4 174 aa2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 IMUPQ9GZP8 106 aa2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 ZNF702PQ9H963 129 aa2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 HRNRQ86YZ3 2850 aaPredicted RBP2.73□□□□□ -1.97
ATPAF1-206ENST00000492233 ANK3Q12955 4377 aaKnown RBP2.72□□□□□ -1.97
ATPAF1-206ENST00000492233 CSMD1Q96PZ7 3565 aa2.72□□□□□ -1.97
ATPAF1-206ENST00000492233 TRBV25-1A0A075B6N4 114 aa2.72□□□□□ -1.97
ATPAF1-206ENST00000492233 TRAV2A0A0B4J234 112 aa2.72□□□□□ -1.97
ATPAF1-206ENST00000492233 LOC107984640A0A0U1RRK4 108 aa2.72□□□□□ -1.97
ATPAF1-206ENST00000492233 KRTAP9-6A0A140TA67 174 aa2.72□□□□□ -1.97
ATPAF1-206ENST00000492233 RPL37AP8A6NKH3 93 aa2.72□□□□□ -1.97
ATPAF1-206ENST00000492233 A8MTW9 85 aa2.72□□□□□ -1.97
ATPAF1-206ENST00000492233 NDUFC2-KCTD14E9PQ53 114 aa2.72□□□□□ -1.97
ATPAF1-206ENST00000492233 K7EP34 96 aa2.72□□□□□ -1.97
ATPAF1-206ENST00000492233 COX6B1P14854 86 aa2.72□□□□□ -1.97
ATPAF1-206ENST00000492233 FXYD2P54710 66 aa2.72□□□□□ -1.97
ATPAF1-206ENST00000492233 SNRPD3P62318 126 aaKnown RBP2.72□□□□□ -1.97
ATPAF1-206ENST00000492233 DOPEY1Q5JWR5 2465 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms