RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 K7ERJ3 54 aa3.34□□□□□ -1.87
RTN4-215ENST00000491592 SOCS3O14543 225 aa3.34□□□□□ -1.87
RTN4-215ENST00000491592 UQCRQO14949 82 aa3.34□□□□□ -1.87
RTN4-215ENST00000491592 SLC25A16P16260 332 aa3.34□□□□□ -1.87
RTN4-215ENST00000491592 LYPD2Q6UXB3 125 aa3.34□□□□□ -1.87
RTN4-215ENST00000491592 Q8NBF4 154 aa3.34□□□□□ -1.87
RTN4-215ENST00000491592 MAPK1IP1LQ8NDC0 245 aa3.34□□□□□ -1.87
RTN4-215ENST00000491592 C20orf78Q9BR46 151 aa3.34□□□□□ -1.87
RTN4-215ENST00000491592 SND1-IT1Q9HBX3 110 aa3.34□□□□□ -1.87
RTN4-215ENST00000491592 RAI1Q7Z5J4 1906 aaPredicted RBP3.33□□□□□ -1.88
RTN4-215ENST00000491592 IGLV2-18A0A075B6J9 118 aa3.33□□□□□ -1.88
RTN4-215ENST00000491592 TRAV40A0A0B4J280 105 aa3.33□□□□□ -1.88
RTN4-215ENST00000491592 RBAKDNA6NC62 111 aa3.33□□□□□ -1.88
RTN4-215ENST00000491592 F8VRH5 84 aa3.33□□□□□ -1.88
RTN4-215ENST00000491592 I3L2K1 104 aa3.33□□□□□ -1.88
RTN4-215ENST00000491592 IGKV1-17P01599 117 aa3.33□□□□□ -1.88
RTN4-215ENST00000491592 IGHV3-23P01764 117 aa3.33□□□□□ -1.88
RTN4-215ENST00000491592 MT-ATP8P03928 68 aa3.33□□□□□ -1.88
RTN4-215ENST00000491592 INAFM2P0DMQ5 153 aa3.33□□□□□ -1.88
RTN4-215ENST00000491592 UBE2D1P51668 147 aa3.33□□□□□ -1.88
RTN4-215ENST00000491592 UBE2D3P61077 147 aa3.33□□□□□ -1.88
RTN4-215ENST00000491592 HIST1H4AP62805 103 aaKnown RBP3.33□□□□□ -1.88
RTN4-215ENST00000491592 UBE2D2P62837 147 aa3.33□□□□□ -1.88
RTN4-215ENST00000491592 TMEM155Q4W5P6 130 aa3.33□□□□□ -1.88
RTN4-215ENST00000491592 C10orf55Q5SWW7 151 aa3.33□□□□□ -1.88
RTN4-215ENST00000491592 HCP5Q6MZN7 132 aa3.33□□□□□ -1.88
RTN4-215ENST00000491592 CNEP1R1Q8N9A8 125 aa3.33□□□□□ -1.88
RTN4-215ENST00000491592 LINC01600Q96MT4 127 aa3.33□□□□□ -1.88
RTN4-215ENST00000491592 MRPL35Q9NZE8 188 aaKnown RBP3.33□□□□□ -1.88
RTN4-215ENST00000491592 KLK5Q9Y337 293 aaPredicted RBP3.33□□□□□ -1.88
RTN4-215ENST00000491592 SDK1Q7Z5N4 2213 aa3.33□□□□□ -1.88
RTN4-215ENST00000491592 BUB1B-PAK6H3BSN5 160 aa3.32□□□□□ -1.88
RTN4-215ENST00000491592 LY6G6DO95868 133 aa3.32□□□□□ -1.88
RTN4-215ENST00000491592 PPP1R17O96001 155 aa3.32□□□□□ -1.88
RTN4-215ENST00000491592 IGHV1-46P01743 117 aa3.32□□□□□ -1.88
RTN4-215ENST00000491592 RBP4P02753 201 aa3.32□□□□□ -1.88
RTN4-215ENST00000491592 BSPH1Q075Z2 132 aa3.32□□□□□ -1.88
RTN4-215ENST00000491592 LINC01554Q52M75 96 aa3.32□□□□□ -1.88
RTN4-215ENST00000491592 C9orf153Q5TBE3 101 aa3.32□□□□□ -1.88
RTN4-215ENST00000491592 FAM216BQ8N7L0 139 aa3.32□□□□□ -1.88
RTN4-215ENST00000491592 LINC00526Q96FQ7 95 aa3.32□□□□□ -1.88
RTN4-215ENST00000491592 XAGE1AQ9HD64 81 aa3.32□□□□□ -1.88
RTN4-215ENST00000491592 CACNA1GO43497 2377 aa3.32□□□□□ -1.88
RTN4-215ENST00000491592 MED13Q9UHV7 2174 aa3.31□□□□□ -1.88
RTN4-215ENST00000491592 TMSB15BA0A087X1C1 80 aa3.31□□□□□ -1.88
RTN4-215ENST00000491592 IGHV3-66A0A0C4DH42 116 aa3.31□□□□□ -1.88
RTN4-215ENST00000491592 EPM2AB3EWF7 344 aa3.31□□□□□ -1.88
RTN4-215ENST00000491592 SNCGO76070 127 aa3.31□□□□□ -1.88
RTN4-215ENST00000491592 HLA-DMBP28068 263 aa3.31□□□□□ -1.88
RTN4-215ENST00000491592 FXYD7P58549 80 aa3.31□□□□□ -1.88
RTN4-215ENST00000491592 DAND5Q8N907 189 aa3.31□□□□□ -1.88
RTN4-215ENST00000491592 DEFB108BQ8NET1 73 aa3.31□□□□□ -1.88
RTN4-215ENST00000491592 SCGB3A1Q96QR1 104 aa3.31□□□□□ -1.88
RTN4-215ENST00000491592 SLC50A1Q9BRV3 221 aa3.31□□□□□ -1.88
RTN4-215ENST00000491592 TTTY13Q9BZ97 58 aa3.31□□□□□ -1.88
RTN4-215ENST00000491592 AGPAT4-IT1Q9H0P7 198 aa3.31□□□□□ -1.88
RTN4-215ENST00000491592 FAM186AA6NE01 2351 aa3.31□□□□□ -1.88
RTN4-215ENST00000491592 NAV3Q8IVL0 2385 aa3.31□□□□□ -1.88
RTN4-215ENST00000491592 A0A0C4DFX4 3053 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 IGHV3-72A0A0B4J1Y9 119 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 LOC107984156A0A0G2JMH3 177 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 IGHV7-4-1A0A0J9YVY3 117 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 ZNF815PA8K554 130 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 K7EIM0 57 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 K7ERS5 55 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 M0R3E3 92 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 PLXNB1O43157 2135 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 NDUFA3O95167 84 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 TRACP01848 142 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 CRYGAP11844 174 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 UBE2AP49459 152 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 LPAL2Q16609 132 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 SPRNQ5BIV9 151 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 NDUFA11Q86Y39 141 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 ARL17AQ8IVW1 177 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 WFDC11Q8NEX6 87 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 VSIG2Q96IQ7 327 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 SMIM2Q9BVW6 85 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 C21orf62Q9NYP8 219 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 KAAG1Q9UBP8 84 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 PRO1854Q9UHT4 67 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 SERP1Q9Y6X1 66 aa3.3□□□□□ -1.88
RTN4-215ENST00000491592 COL27A1Q8IZC6 1860 aaPredicted RBP3.3□□□□□ -1.88
RTN4-215ENST00000491592 IGKV2-40A0A087WW87 121 aaPredicted RBP3.29□□□□□ -1.88
RTN4-215ENST00000491592 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.29□□□□□ -1.88
RTN4-215ENST00000491592 TRAV17A0A0B4J275 112 aa3.29□□□□□ -1.88
RTN4-215ENST00000491592 IGHV1-3A0A0C4DH29 117 aa3.29□□□□□ -1.88
RTN4-215ENST00000491592 H3BT86 120 aa3.29□□□□□ -1.88
RTN4-215ENST00000491592 TCL1BO95988 128 aa3.29□□□□□ -1.88
RTN4-215ENST00000491592 IGKV2D-40P01614 121 aaPredicted RBP3.29□□□□□ -1.88
RTN4-215ENST00000491592 IGHV1-8P0DP01 117 aa3.29□□□□□ -1.88
RTN4-215ENST00000491592 CCL3L1P16619 93 aa3.29□□□□□ -1.88
RTN4-215ENST00000491592 ATXN8Q156A1 80 aa3.29□□□□□ -1.88
RTN4-215ENST00000491592 Q8N377 158 aa3.29□□□□□ -1.88
RTN4-215ENST00000491592 CHCHD7Q9BUK0 85 aa3.29□□□□□ -1.88
RTN4-215ENST00000491592 ZNRD1Q9P1U0 126 aa3.29□□□□□ -1.88
RTN4-215ENST00000491592 LENEPQ9Y5L5 61 aa3.29□□□□□ -1.88
RTN4-215ENST00000491592 MALRD1Q5VYJ5 2156 aa3.29□□□□□ -1.88
RTN4-215ENST00000491592 IGHV3-49A0A0A0MS15 119 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms