RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 ECSCRQ19T08 205 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 AMTNQ6UX39 209 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 Q71RC1 249 aaPredicted RBP1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 Q75L30 129 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 C20orf203Q8NBC4 194 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 DCANP1Q8TF63 244 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 TMEM263Q8WUH6 116 aaKnown RBP1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 RPL39LQ96EH5 51 aaKnown RBP1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 C9orf85Q96MD7 179 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 AMELXQ99217 191 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 SPXQ9BT56 116 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 PPDPFQ9H3Y8 114 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 PRORYQ9H606 182 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 DAZ1Q9NQZ3 744 aaKnown RBP1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 ZNF256Q9Y2P7 627 aaPredicted RBP1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 KALRNO60229 2985 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 SORL1Q92673 2214 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 IGLV4-69A0A075B6H9 119 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV3OR16-8A0A075B7F1 116 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 TRAV26-1A0A087WT03 109 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV3-49A0A0A0MS15 119 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 TRAV2A0A0B4J234 112 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 TRAV12-3A0A0B4J271 114 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV3-16A0A0C4DH30 117 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV1-58A0A0C4DH39 117 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 TINCRA0A1B0GVN0 87 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 KRTAP16-1A8MUX0 517 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 B4DSR2 109 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 C9JAW5 83 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 H3BT86 120 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 K7EQG2 157 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 K7ERJ3 54 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 SNCGO76070 127 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 LY6HO94772 140 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 TSPAN13O95857 204 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 MGPP08493 103 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV3-30-3P0DP02 117 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 ZNF22P17026 224 aaPredicted RBP1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 RPL13AP40429 203 aaKnown RBP1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 INSL3P51460 131 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 BLCAPP62952 87 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 LY6DQ14210 128 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 NSUN5P1Q3KNT7 163 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 LINC01620Q4KN68 170 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 PRR30Q53SZ7 412 aaPredicted RBP1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 KRTAP5-1Q6L8H4 278 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 GAGE2AQ6NT46 116 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 C2orf82Q6UX34 121 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 UNQ9165/PRO28630Q6UXU0 137 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 Q6ZQT7 251 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 Q6ZUT4 128 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 FAM19A3Q7Z5A8 133 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 ZNF843Q8N446 348 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 ZNRF2Q8NHG8 242 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 UBE2E2Q96LR5 201 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 LINC00467Q9BRT7 94 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 TIMM21Q9BVV7 248 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 TMEM126AQ9H061 195 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 TP53TG1Q9Y2A0 90 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 CSDC2Q9Y534 153 aaKnown RBP1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 SELENOKQ9Y6D0 94 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 NBEAQ8NFP9 2946 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 ZDBF2Q9HCK1 2354 aa1.47□□□□□ -2.17
SNRNP40-207ENST00000491106 APC2O95996 2303 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 PRRC2CQ9Y520 2896 aaKnown RBP1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 COL6A6A6NMZ7 2263 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 PKDREJQ9NTG1 2253 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 ZZEF1O43149 2961 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 CELSR3Q9NYQ7 3312 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 TRAV8-4A0A0B4J246 113 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 TRAV4A0A0B4J268 109 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 TRAV25A0A0B4J276 109 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 A0A0J9YXV3 536 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 A8MTW9 85 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 F6UB75 175 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 H0YGX0 51 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 J3KRW8 73 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 J3QLI3 93 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 IGHV3-53P01767 116 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 MT-ATP8P03928 68 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 BAALC-AS2P0C853 105 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 PRB4P10163 310 aaPredicted RBP1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 VPREB1P12018 145 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 PSMB8P28062 276 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 RPS28P62857 69 aaKnown RBP1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 RPL39P62891 51 aaKnown RBP1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 HERVK_113P63121 156 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 HERV-K104P63124 156 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 PRR9Q5T870 116 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 C10orf105Q8TEF2 133 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 VSIG2Q96IQ7 327 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 CITED1Q99966 193 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 ANAPC13Q9BS18 74 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 BPESC1Q9GZL8 116 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 JPT2Q9H910 190 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 LINC00527Q9UJ94 153 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 PRUNE2Q8WUY3 3088 aa1.46□□□□□ -2.18
SNRNP40-207ENST00000491106 TPRP12270 2363 aaKnown RBP1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 TRIOBPQ9H2D6 2365 aa1.45□□□□□ -2.18
SNRNP40-207ENST00000491106 COL6A3P12111 3177 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms