RNA–Protein interactions for RNA: ENST00000490132.1

COL9A2-209, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-209ENST00000490132 GFRA4Q9GZZ7 299 aa11.91□□□□□ -0.5
COL9A2-209ENST00000490132 GATCO43716 136 aaKnown RBP11.9□□□□□ -0.5
COL9A2-209ENST00000490132 CEBPGP53567 150 aa11.9□□□□□ -0.5
COL9A2-209ENST00000490132 FOXA3P55318 350 aaPredicted RBP11.9□□□□□ -0.5
COL9A2-209ENST00000490132 REG3AQ06141 175 aa11.9□□□□□ -0.5
COL9A2-209ENST00000490132 FAM231DQ6ZW35 169 aa11.9□□□□□ -0.5
COL9A2-209ENST00000490132 PRSS1P07477 247 aa11.89□□□□□ -0.51
COL9A2-209ENST00000490132 IGLV10-54A0A075B6I4 117 aa11.88□□□□□ -0.51
COL9A2-209ENST00000490132 A0A1B0GUV1 79 aa11.88□□□□□ -0.51
COL9A2-209ENST00000490132 AMTP48728 403 aa11.88□□□□□ -0.51
COL9A2-209ENST00000490132 COTL1Q14019 142 aa11.88□□□□□ -0.51
COL9A2-209ENST00000490132 RPL39LQ96EH5 51 aaKnown RBP11.88□□□□□ -0.51
COL9A2-209ENST00000490132 CHAC1Q9BUX1 264 aa11.88□□□□□ -0.51
COL9A2-209ENST00000490132 DMBT1Q9UGM3 2413 aaPredicted RBP11.87□□□□□ -0.51
COL9A2-209ENST00000490132 A8MWL6 223 aa11.86□□□□□ -0.51
COL9A2-209ENST00000490132 CIRBP-AS1Q8TBR5 109 aa11.86□□□□□ -0.51
COL9A2-209ENST00000490132 FAM210AQ96ND0 272 aa11.86□□□□□ -0.51
COL9A2-209ENST00000490132 SMIM7Q9BQ49 75 aa11.86□□□□□ -0.51
COL9A2-209ENST00000490132 EIF5A2Q9GZV4 153 aaKnown RBP11.86□□□□□ -0.51
COL9A2-209ENST00000490132 PLA2G1BP04054 148 aaKnown RBP11.85□□□□□ -0.51
COL9A2-209ENST00000490132 CT83Q5H943 113 aa11.85□□□□□ -0.51
COL9A2-209ENST00000490132 LINC01551Q86U37 167 aa11.85□□□□□ -0.51
COL9A2-209ENST00000490132 UBE2L6O14933 153 aa11.84□□□□□ -0.51
COL9A2-209ENST00000490132 NDUFS6O75380 124 aaKnown RBP11.84□□□□□ -0.51
COL9A2-209ENST00000490132 SRP19P09132 144 aaKnown RBP11.84□□□□□ -0.51
COL9A2-209ENST00000490132 SMIM15Q7Z3B0 74 aa11.84□□□□□ -0.51
COL9A2-209ENST00000490132 TRAV8-4A0A0B4J246 113 aa11.83□□□□□ -0.52
COL9A2-209ENST00000490132 DGAT2L7PQ6IED9 249 aa11.83□□□□□ -0.52
COL9A2-209ENST00000490132 ZNF727A8MUV8 499 aa11.82□□□□□ -0.52
COL9A2-209ENST00000490132 GAS8-AS1O95177 125 aa11.82□□□□□ -0.52
COL9A2-209ENST00000490132 KRTAP10-4P60372 401 aaPredicted RBP11.82□□□□□ -0.52
COL9A2-209ENST00000490132 C9orf163Q8N9P6 203 aa11.82□□□□□ -0.52
COL9A2-209ENST00000490132 TSKUQ8WUA8 353 aa11.81□□□□□ -0.52
COL9A2-209ENST00000490132 PKHD1L1Q86WI1 4243 aa11.81□□□□□ -0.52
COL9A2-209ENST00000490132 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.8□□□□□ -0.52
COL9A2-209ENST00000490132 IGKV2-29A2NJV5 120 aaPredicted RBP11.8□□□□□ -0.52
COL9A2-209ENST00000490132 SDHAF1A6NFY7 115 aa11.8□□□□□ -0.52
COL9A2-209ENST00000490132 HIGD1CA8MV81 97 aa11.8□□□□□ -0.52
COL9A2-209ENST00000490132 NCR2O95944 276 aa11.8□□□□□ -0.52
COL9A2-209ENST00000490132 TEX261Q6UWH6 196 aa11.8□□□□□ -0.52
COL9A2-209ENST00000490132 CLRN3Q8NCR9 226 aa11.8□□□□□ -0.52
COL9A2-209ENST00000490132 OSTCQ9NRP0 149 aa11.8□□□□□ -0.52
COL9A2-209ENST00000490132 TRBV6-5A0A0K0K1A5 114 aa11.79□□□□□ -0.52
COL9A2-209ENST00000490132 APCSP02743 223 aa11.79□□□□□ -0.52
COL9A2-209ENST00000490132 BORCS7Q96B45 105 aa11.79□□□□□ -0.52
COL9A2-209ENST00000490132 RNF185Q96GF1 192 aa11.79□□□□□ -0.52
COL9A2-209ENST00000490132 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.79□□□□□ -0.52
COL9A2-209ENST00000490132 IGKV3OR2-268A0A0C4DH90 116 aa11.78□□□□□ -0.52
COL9A2-209ENST00000490132 A0A1B0GUT8 65 aa11.78□□□□□ -0.52
COL9A2-209ENST00000490132 hDV102S1A0JD36 115 aa11.78□□□□□ -0.52
COL9A2-209ENST00000490132 PANO1I0J062 215 aa11.78□□□□□ -0.52
COL9A2-209ENST00000490132 V9GYV3 84 aa11.78□□□□□ -0.52
COL9A2-209ENST00000490132 FAM231BA6NCW3 169 aa11.77□□□□□ -0.53
COL9A2-209ENST00000490132 SLPIP03973 132 aa11.77□□□□□ -0.53
COL9A2-209ENST00000490132 CNBPP62633 177 aaKnown RBP11.77□□□□□ -0.53
COL9A2-209ENST00000490132 AMMECR1LQ6DCA0 310 aa11.77□□□□□ -0.53
COL9A2-209ENST00000490132 SDIM1Q6ZPB5 146 aa11.77□□□□□ -0.53
COL9A2-209ENST00000490132 TMEM191AQ9H0A3 160 aa11.77□□□□□ -0.53
COL9A2-209ENST00000490132 GAGE12HA6NDE8 117 aa11.76□□□□□ -0.53
COL9A2-209ENST00000490132 C9JQL5 133 aa11.76□□□□□ -0.53
COL9A2-209ENST00000490132 I3L3M4 83 aa11.76□□□□□ -0.53
COL9A2-209ENST00000490132 FGF6P10767 208 aa11.76□□□□□ -0.53
COL9A2-209ENST00000490132 RPS10P46783 165 aaKnown RBP11.76□□□□□ -0.53
COL9A2-209ENST00000490132 ISOC2Q96AB3 205 aa11.76□□□□□ -0.53
COL9A2-209ENST00000490132 H7C423 109 aa11.75□□□□□ -0.53
COL9A2-209ENST00000490132 TSHBP01222 138 aa11.75□□□□□ -0.53
COL9A2-209ENST00000490132 RAB4AP20338 218 aa11.75□□□□□ -0.53
COL9A2-209ENST00000490132 PMCHP20382 165 aa11.75□□□□□ -0.53
COL9A2-209ENST00000490132 RNASEKQ6P5S7 137 aaKnown RBP11.75□□□□□ -0.53
COL9A2-209ENST00000490132 AMN1Q8IY45 258 aa11.75□□□□□ -0.53
COL9A2-209ENST00000490132 C15orf56Q8N910 161 aa11.75□□□□□ -0.53
COL9A2-209ENST00000490132 TMEM242Q9NWH2 141 aa11.75□□□□□ -0.53
COL9A2-209ENST00000490132 FAT3Q8TDW7 4589 aa11.75□□□□□ -0.53
COL9A2-209ENST00000490132 LRP1Q07954 4544 aaKnown RBP11.74□□□□□ -0.53
COL9A2-209ENST00000490132 ESDP10768 282 aa11.74□□□□□ -0.53
COL9A2-209ENST00000490132 RPL23P62829 140 aaKnown RBP11.74□□□□□ -0.53
COL9A2-209ENST00000490132 NUP35Q8NFH5 326 aa11.74□□□□□ -0.53
COL9A2-209ENST00000490132 ST20Q9HBF5 79 aa11.74□□□□□ -0.53
COL9A2-209ENST00000490132 SRSF3P84103 164 aaKnown RBP11.73□□□□□ -0.53
COL9A2-209ENST00000490132 TMEM241Q24JQ0 296 aa11.73□□□□□ -0.53
COL9A2-209ENST00000490132 FAM74A3Q4VXF1 159 aa11.73□□□□□ -0.53
COL9A2-209ENST00000490132 CHCHD10Q8WYQ3 142 aaPredicted RBP11.73□□□□□ -0.53
COL9A2-209ENST00000490132 MRAP2Q96G30 205 aa11.73□□□□□ -0.53
COL9A2-209ENST00000490132 SMKR1H3BMG3 65 aa11.72□□□□□ -0.53
COL9A2-209ENST00000490132 POLR2KP53803 58 aaKnown RBP11.72□□□□□ -0.53
COL9A2-209ENST00000490132 AP5S1Q9NUS5 200 aa11.72□□□□□ -0.53
COL9A2-209ENST00000490132 KRTAP29-1A8MX34 341 aaPredicted RBP11.71□□□□□ -0.53
COL9A2-209ENST00000490132 J3QL48 77 aa11.71□□□□□ -0.53
COL9A2-209ENST00000490132 ZNF25P17030 456 aaPredicted RBP11.71□□□□□ -0.53
COL9A2-209ENST00000490132 RIGQ13278 110 aa11.71□□□□□ -0.53
COL9A2-209ENST00000490132 CIRBPQ14011 172 aaKnown RBP11.71□□□□□ -0.53
COL9A2-209ENST00000490132 ADIRFQ15847 76 aa11.71□□□□□ -0.53
COL9A2-209ENST00000490132 IGHV3-64A0A075B6Q5 118 aa11.7□□□□□ -0.54
COL9A2-209ENST00000490132 TRBV27A0A0K0K1C4 114 aa11.7□□□□□ -0.54
COL9A2-209ENST00000490132 RPL37AP61513 92 aaKnown RBP11.7□□□□□ -0.54
COL9A2-209ENST00000490132 HIGD2BQ4VC39 106 aa11.7□□□□□ -0.54
COL9A2-209ENST00000490132 OR5A1Q8NGJ0 315 aa11.7□□□□□ -0.54
COL9A2-209ENST00000490132 NAT8Q9UHE5 227 aa11.7□□□□□ -0.54
COL9A2-209ENST00000490132 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.69□□□□□ -0.54
COL9A2-209ENST00000490132 CHTF8P0CG12 524 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms