RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 AMTP48728 403 aa11.55□□□□□ -0.56
MDC1-206ENST00000489540 Q8N976 141 aa11.55□□□□□ -0.56
MDC1-206ENST00000489540 TMEM218A2RU14 115 aa11.54□□□□□ -0.56
MDC1-206ENST00000489540 PPP1R17O96001 155 aa11.54□□□□□ -0.56
MDC1-206ENST00000489540 APOC3P02656 99 aa11.54□□□□□ -0.56
MDC1-206ENST00000489540 CRPP02741 224 aa11.54□□□□□ -0.56
MDC1-206ENST00000489540 MT-ND4LP03901 98 aa11.54□□□□□ -0.56
MDC1-206ENST00000489540 S100A8P05109 93 aa11.54□□□□□ -0.56
MDC1-206ENST00000489540 SVBPQ8N300 66 aa11.54□□□□□ -0.56
MDC1-206ENST00000489540 ANAPC16Q96DE5 110 aa11.54□□□□□ -0.56
MDC1-206ENST00000489540 ST20Q9HBF5 79 aa11.54□□□□□ -0.56
MDC1-206ENST00000489540 IGKV2D-24A0A075B6R9 120 aa11.53□□□□□ -0.56
MDC1-206ENST00000489540 A0A1B0GUV1 79 aa11.53□□□□□ -0.56
MDC1-206ENST00000489540 UBE2L6O14933 153 aa11.53□□□□□ -0.56
MDC1-206ENST00000489540 PMCHP20382 165 aa11.53□□□□□ -0.56
MDC1-206ENST00000489540 CAMPP49913 170 aa11.53□□□□□ -0.56
MDC1-206ENST00000489540 FAM104BQ5XKR9 115 aa11.53□□□□□ -0.56
MDC1-206ENST00000489540 ENHOQ6UWT2 76 aa11.53□□□□□ -0.56
MDC1-206ENST00000489540 I3L3M4 83 aa11.52□□□□□ -0.56
MDC1-206ENST00000489540 HBBP68871 147 aa11.52□□□□□ -0.56
MDC1-206ENST00000489540 DEFB104AQ8WTQ1 72 aa11.52□□□□□ -0.56
MDC1-206ENST00000489540 SEC11CQ9BY50 192 aa11.52□□□□□ -0.56
MDC1-206ENST00000489540 CARHSP1Q9Y2V2 147 aaKnown RBP11.52□□□□□ -0.56
MDC1-206ENST00000489540 F8W036 122 aa11.52□□□□□ -0.57
MDC1-206ENST00000489540 GAS8-AS1O95177 125 aa11.52□□□□□ -0.57
MDC1-206ENST00000489540 MIAQ16674 131 aa11.52□□□□□ -0.57
MDC1-206ENST00000489540 Q8N814 137 aa11.52□□□□□ -0.57
MDC1-206ENST00000489540 NTN5Q8WTR8 489 aaPredicted RBP11.52□□□□□ -0.57
MDC1-206ENST00000489540 C1orf43Q9BWL3 253 aa11.52□□□□□ -0.57
MDC1-206ENST00000489540 PRR34Q9NV39 138 aa11.52□□□□□ -0.57
MDC1-206ENST00000489540 SNAPINO95295 136 aa11.51□□□□□ -0.57
MDC1-206ENST00000489540 C10orf91Q5T1B1 145 aa11.51□□□□□ -0.57
MDC1-206ENST00000489540 MRPL54Q6P161 138 aaKnown RBP11.51□□□□□ -0.57
MDC1-206ENST00000489540 ATP5L2Q7Z4Y8 100 aa11.51□□□□□ -0.57
MDC1-206ENST00000489540 LINC00269Q8N2A0 174 aa11.51□□□□□ -0.57
MDC1-206ENST00000489540 MAPKAPK5-AS1Q8N8E1 139 aa11.51□□□□□ -0.57
MDC1-206ENST00000489540 TMEM70Q9BUB7 260 aa11.51□□□□□ -0.57
MDC1-206ENST00000489540 TMA7Q9Y2S6 64 aaKnown RBP11.51□□□□□ -0.57
MDC1-206ENST00000489540 LRP1BQ9NZR2 4599 aa11.51□□□□□ -0.57
MDC1-206ENST00000489540 KIAA1109Q2LD37 5005 aa11.5□□□□□ -0.57
MDC1-206ENST00000489540 A0A1B0GXF2 115 aa11.5□□□□□ -0.57
MDC1-206ENST00000489540 H7C423 109 aa11.5□□□□□ -0.57
MDC1-206ENST00000489540 APCSP02743 223 aa11.5□□□□□ -0.57
MDC1-206ENST00000489540 RPS10P46783 165 aaKnown RBP11.5□□□□□ -0.57
MDC1-206ENST00000489540 POLR2KP53803 58 aaKnown RBP11.5□□□□□ -0.57
MDC1-206ENST00000489540 TRBV27A0A0K0K1C4 114 aa11.49□□□□□ -0.57
MDC1-206ENST00000489540 VCYO14598 125 aa11.49□□□□□ -0.57
MDC1-206ENST00000489540 SCO1O75880 301 aa11.49□□□□□ -0.57
MDC1-206ENST00000489540 MRPL51Q4U2R6 128 aaKnown RBP11.49□□□□□ -0.57
MDC1-206ENST00000489540 C20orf203Q8NBC4 194 aa11.49□□□□□ -0.57
MDC1-206ENST00000489540 BAALCQ8WXS3 180 aa11.49□□□□□ -0.57
MDC1-206ENST00000489540 SMKR1H3BMG3 65 aa11.48□□□□□ -0.57
MDC1-206ENST00000489540 CDK2AP2O75956 126 aa11.48□□□□□ -0.57
MDC1-206ENST00000489540 CKS2P33552 79 aa11.48□□□□□ -0.57
MDC1-206ENST00000489540 FUSP35637 526 aaKnown RBP eCLIP11.48□□□□□ -0.57
MDC1-206ENST00000489540 DNAH5Q8TE73 4624 aa11.47□□□□□ -0.57
MDC1-206ENST00000489540 HERC2O95714 4834 aa11.47□□□□□ -0.57
MDC1-206ENST00000489540 IGLV4-60A0A075B6I1 120 aa11.47□□□□□ -0.57
MDC1-206ENST00000489540 IGLV5-52A0A0A0MRZ9 124 aa11.47□□□□□ -0.57
MDC1-206ENST00000489540 SUMO2P61956 95 aaKnown RBP11.47□□□□□ -0.57
MDC1-206ENST00000489540 REG3AQ06141 175 aa11.47□□□□□ -0.57
MDC1-206ENST00000489540 NRACQ8N912 160 aa11.47□□□□□ -0.57
MDC1-206ENST00000489540 TSHBP01222 138 aa11.46□□□□□ -0.57
MDC1-206ENST00000489540 ADCYAP1P18509 176 aa11.46□□□□□ -0.57
MDC1-206ENST00000489540 WFDC2Q14508 124 aa11.46□□□□□ -0.57
MDC1-206ENST00000489540 AMMECR1LQ6DCA0 310 aa11.46□□□□□ -0.57
MDC1-206ENST00000489540 C20orf78Q9BR46 151 aa11.46□□□□□ -0.57
MDC1-206ENST00000489540 TRBV24-1A0A075B6N3 115 aa11.45□□□□□ -0.58
MDC1-206ENST00000489540 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.45□□□□□ -0.58
MDC1-206ENST00000489540 TRAV8-4A0A0B4J246 113 aa11.45□□□□□ -0.58
MDC1-206ENST00000489540 IGKV2-29A2NJV5 120 aaPredicted RBP11.45□□□□□ -0.58
MDC1-206ENST00000489540 LECT2O14960 151 aa11.45□□□□□ -0.58
MDC1-206ENST00000489540 PPBPP02775 128 aa11.45□□□□□ -0.58
MDC1-206ENST00000489540 GCSHP23434 173 aa11.45□□□□□ -0.58
MDC1-206ENST00000489540 CLPSL2Q6UWE3 100 aa11.45□□□□□ -0.58
MDC1-206ENST00000489540 TMEM242Q9NWH2 141 aa11.45□□□□□ -0.58
MDC1-206ENST00000489540 ESDP10768 282 aa11.44□□□□□ -0.58
MDC1-206ENST00000489540 RNASEKQ6P5S7 137 aaKnown RBP11.44□□□□□ -0.58
MDC1-206ENST00000489540 BTF3L4Q96K17 158 aa11.44□□□□□ -0.58
MDC1-206ENST00000489540 IMMP2LQ96T52 175 aa11.44□□□□□ -0.58
MDC1-206ENST00000489540 KIR2DL4Q99706 377 aa11.44□□□□□ -0.58
MDC1-206ENST00000489540 CTDSP1Q9GZU7 261 aa11.44□□□□□ -0.58
MDC1-206ENST00000489540 FGF6P10767 208 aa11.43□□□□□ -0.58
MDC1-206ENST00000489540 ZNF25P17030 456 aaPredicted RBP11.43□□□□□ -0.58
MDC1-206ENST00000489540 FCER1GP30273 86 aa11.43□□□□□ -0.58
MDC1-206ENST00000489540 D6R8Y8 96 aa11.43□□□□□ -0.58
MDC1-206ENST00000489540 RPL32P62910 135 aaKnown RBP11.43□□□□□ -0.58
MDC1-206ENST00000489540 C14orf177Q52M58 125 aa11.43□□□□□ -0.58
MDC1-206ENST00000489540 TMEM101Q96IK0 257 aa11.43□□□□□ -0.58
MDC1-206ENST00000489540 RYR1P21817 5038 aa11.42□□□□□ -0.58
MDC1-206ENST00000489540 PHOX2AO14813 284 aa11.42□□□□□ -0.58
MDC1-206ENST00000489540 TNFRSF6BO95407 300 aa11.42□□□□□ -0.58
MDC1-206ENST00000489540 KRTAP10-1P60331 282 aa11.42□□□□□ -0.58
MDC1-206ENST00000489540 KRTAP26-1Q6PEX3 210 aa11.42□□□□□ -0.58
MDC1-206ENST00000489540 C7orf77A4D0Y5 90 aa11.41□□□□□ -0.58
MDC1-206ENST00000489540 TCAPO15273 167 aa11.41□□□□□ -0.58
MDC1-206ENST00000489540 HLA-DQA1P01909 254 aa11.41□□□□□ -0.58
MDC1-206ENST00000489540 TMEM136Q6ZRR5 245 aa11.41□□□□□ -0.58
MDC1-206ENST00000489540 ORMDL3Q8N138 153 aa11.41□□□□□ -0.58
MDC1-206ENST00000489540 IGLV10-54A0A075B6I4 117 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms