RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 TNFRSF6BO95407 300 aa9.93□□□□□ -0.82
CLDN11-209ENST00000489485 C15orf53Q8NAA6 179 aa9.93□□□□□ -0.82
CLDN11-209ENST00000489485 NEXN-AS1Q8NBZ9 246 aa9.93□□□□□ -0.82
CLDN11-209ENST00000489485 ICOSQ9Y6W8 199 aa9.93□□□□□ -0.82
CLDN11-209ENST00000489485 A0A096LPF7 62 aa9.92□□□□□ -0.82
CLDN11-209ENST00000489485 KRTDAPP60985 99 aa9.92□□□□□ -0.82
CLDN11-209ENST00000489485 ZNRF2Q8NHG8 242 aa9.92□□□□□ -0.82
CLDN11-209ENST00000489485 SNHG12Q9BXW3 62 aa9.92□□□□□ -0.82
CLDN11-209ENST00000489485 TNFRSF18Q9Y5U5 241 aa9.92□□□□□ -0.82
CLDN11-209ENST00000489485 TRBV10-1A0A0K0K1A3 114 aa9.91□□□□□ -0.82
CLDN11-209ENST00000489485 LOC389332A0A1B0GUA5 103 aa9.91□□□□□ -0.82
CLDN11-209ENST00000489485 GAGE12JA6NER3 117 aa9.91□□□□□ -0.82
CLDN11-209ENST00000489485 EREGO14944 169 aa9.91□□□□□ -0.82
CLDN11-209ENST00000489485 PPP1R17O96001 155 aa9.91□□□□□ -0.82
CLDN11-209ENST00000489485 PMCHP20382 165 aa9.91□□□□□ -0.82
CLDN11-209ENST00000489485 GAGE1Q13065 139 aa9.91□□□□□ -0.82
CLDN11-209ENST00000489485 GAGE4Q13068 117 aa9.91□□□□□ -0.82
CLDN11-209ENST00000489485 GAGE5Q13069 117 aa9.91□□□□□ -0.82
CLDN11-209ENST00000489485 MRPL23Q16540 153 aaKnown RBP9.91□□□□□ -0.82
CLDN11-209ENST00000489485 GAGE13Q4V321 117 aa9.91□□□□□ -0.82
CLDN11-209ENST00000489485 STARD9Q9P2P6 4700 aa9.91□□□□□ -0.82
CLDN11-209ENST00000489485 TRBV7-3A0A075B6L6 115 aa9.91□□□□□ -0.82
CLDN11-209ENST00000489485 HSBP1L1C9JCN9 74 aa9.91□□□□□ -0.82
CLDN11-209ENST00000489485 TCAPO15273 167 aa9.91□□□□□ -0.82
CLDN11-209ENST00000489485 SUMO2P61956 95 aaKnown RBP9.91□□□□□ -0.82
CLDN11-209ENST00000489485 ST20Q9HBF5 79 aa9.91□□□□□ -0.82
CLDN11-209ENST00000489485 APLNQ9ULZ1 77 aa9.91□□□□□ -0.82
CLDN11-209ENST00000489485 LAMTOR2Q9Y2Q5 125 aa9.91□□□□□ -0.82
CLDN11-209ENST00000489485 SDHAF1A6NFY7 115 aa9.9□□□□□ -0.82
CLDN11-209ENST00000489485 TCTAP57738 103 aa9.9□□□□□ -0.82
CLDN11-209ENST00000489485 RPL36AP83881 106 aaKnown RBP9.9□□□□□ -0.82
CLDN11-209ENST00000489485 PMCHL1Q16048 86 aa9.9□□□□□ -0.82
CLDN11-209ENST00000489485 C18orf32Q8TCD1 76 aa9.9□□□□□ -0.82
CLDN11-209ENST00000489485 DEFB104AQ8WTQ1 72 aa9.9□□□□□ -0.82
CLDN11-209ENST00000489485 RPL36ALQ969Q0 106 aaKnown RBP9.9□□□□□ -0.82
CLDN11-209ENST00000489485 PAM16Q9Y3D7 125 aa9.9□□□□□ -0.82
CLDN11-209ENST00000489485 HSBP1O75506 76 aa9.89□□□□□ -0.83
CLDN11-209ENST00000489485 DNAJC30Q96LL9 226 aa9.89□□□□□ -0.83
CLDN11-209ENST00000489485 TRBV6-5A0A0K0K1A5 114 aa9.89□□□□□ -0.83
CLDN11-209ENST00000489485 NEGR1Q7Z3B1 354 aa9.89□□□□□ -0.83
CLDN11-209ENST00000489485 C20orf78Q9BR46 151 aa9.89□□□□□ -0.83
CLDN11-209ENST00000489485 TMEM70Q9BUB7 260 aa9.89□□□□□ -0.83
CLDN11-209ENST00000489485 MAP1LC3AQ9H492 121 aa9.89□□□□□ -0.83
CLDN11-209ENST00000489485 IGHV3-38A0A0C4DH36 116 aa9.88□□□□□ -0.83
CLDN11-209ENST00000489485 UQCR10Q9UDW1 63 aa9.88□□□□□ -0.83
CLDN11-209ENST00000489485 C20orf202A1L168 122 aa9.87□□□□□ -0.83
CLDN11-209ENST00000489485 IFI27P40305 119 aaPredicted RBP9.87□□□□□ -0.83
CLDN11-209ENST00000489485 POLR2KP53803 58 aaKnown RBP9.87□□□□□ -0.83
CLDN11-209ENST00000489485 SPATA45Q537H7 98 aa9.87□□□□□ -0.83
CLDN11-209ENST00000489485 NIT1Q86X76 327 aa9.87□□□□□ -0.83
CLDN11-209ENST00000489485 ATP6V0E2Q8NHE4 81 aa9.87□□□□□ -0.83
CLDN11-209ENST00000489485 DYNC2H1Q8NCM8 4307 aaKnown RBP9.87□□□□□ -0.83
CLDN11-209ENST00000489485 C3orf79P0CE67 100 aa9.87□□□□□ -0.83
CLDN11-209ENST00000489485 UBE2D3P61077 147 aa9.87□□□□□ -0.83
CLDN11-209ENST00000489485 UBE2D2P62837 147 aa9.87□□□□□ -0.83
CLDN11-209ENST00000489485 Q8N976 141 aa9.87□□□□□ -0.83
CLDN11-209ENST00000489485 PRSS3P2Q8NHM4 247 aa9.87□□□□□ -0.83
CLDN11-209ENST00000489485 SH2D6Q7Z4S9 175 aa9.86□□□□□ -0.83
CLDN11-209ENST00000489485 CHCHD1Q96BP2 118 aaKnown RBP9.86□□□□□ -0.83
CLDN11-209ENST00000489485 SMIM2Q9BVW6 85 aa9.86□□□□□ -0.83
CLDN11-209ENST00000489485 PLECQ15149 4684 aaKnown RBP9.86□□□□□ -0.83
CLDN11-209ENST00000489485 LYSTQ99698 3801 aa9.86□□□□□ -0.83
CLDN11-209ENST00000489485 TRBV27A0A0K0K1C4 114 aa9.85□□□□□ -0.83
CLDN11-209ENST00000489485 VCYO14598 125 aa9.85□□□□□ -0.83
CLDN11-209ENST00000489485 I3L3M4 83 aa9.85□□□□□ -0.83
CLDN11-209ENST00000489485 LINC00694P0DN24 101 aa9.85□□□□□ -0.83
CLDN11-209ENST00000489485 CCL18P55774 89 aa9.85□□□□□ -0.83
CLDN11-209ENST00000489485 ESRGQ1W209 222 aa9.85□□□□□ -0.83
CLDN11-209ENST00000489485 RNASEKQ6P5S7 137 aaKnown RBP9.85□□□□□ -0.83
CLDN11-209ENST00000489485 DAZ4Q86SG3 579 aaKnown RBP9.85□□□□□ -0.83
CLDN11-209ENST00000489485 DAZ3Q9NR90 486 aaKnown RBP9.85□□□□□ -0.83
CLDN11-209ENST00000489485 IGLV2-18A0A075B6J9 118 aa9.84□□□□□ -0.83
CLDN11-209ENST00000489485 LYPD5Q6UWN5 251 aa9.84□□□□□ -0.83
CLDN11-209ENST00000489485 FAM19A2Q8N3H0 131 aa9.84□□□□□ -0.83
CLDN11-209ENST00000489485 Q8N8P6 123 aa9.84□□□□□ -0.83
CLDN11-209ENST00000489485 KIR2DL4Q99706 377 aa9.84□□□□□ -0.83
CLDN11-209ENST00000489485 COL5A1-AS1Q5SY13 56 aa9.83□□□□□ -0.84
CLDN11-209ENST00000489485 UBE2DNLQ8IWF7 75 aa9.83□□□□□ -0.84
CLDN11-209ENST00000489485 GTSF1LQ9H1H1 148 aa9.83□□□□□ -0.84
CLDN11-209ENST00000489485 NXT2Q9NPJ8 142 aaKnown RBP9.83□□□□□ -0.84
CLDN11-209ENST00000489485 LINC00614P0C842 121 aa9.83□□□□□ -0.84
CLDN11-209ENST00000489485 RPL32P62910 135 aaKnown RBP9.83□□□□□ -0.84
CLDN11-209ENST00000489485 URB1-AS1Q96HZ7 61 aa9.83□□□□□ -0.84
CLDN11-209ENST00000489485 IGLC3P0DOY3 106 aa9.82□□□□□ -0.84
CLDN11-209ENST00000489485 HNRNPA3P51991 378 aaKnown RBP9.82□□□□□ -0.84
CLDN11-209ENST00000489485 FA2HQ7L5A8 372 aa9.82□□□□□ -0.84
CLDN11-209ENST00000489485 TRAV9-2A0A087WT02 112 aa9.81□□□□□ -0.84
CLDN11-209ENST00000489485 TSHBP01222 138 aa9.81□□□□□ -0.84
CLDN11-209ENST00000489485 FCER1GP30273 86 aa9.81□□□□□ -0.84
CLDN11-209ENST00000489485 LINC00588Q9Y4M8 146 aa9.81□□□□□ -0.84
CLDN11-209ENST00000489485 ODF1Q14990 250 aa9.81□□□□□ -0.84
CLDN11-209ENST00000489485 Q6ZN92 141 aa9.81□□□□□ -0.84
CLDN11-209ENST00000489485 NTM-AS1Q6ZSK4 140 aa9.81□□□□□ -0.84
CLDN11-209ENST00000489485 AP5S1Q9NUS5 200 aa9.81□□□□□ -0.84
CLDN11-209ENST00000489485 ZNF25P17030 456 aaPredicted RBP9.8□□□□□ -0.84
CLDN11-209ENST00000489485 MRPS16Q9Y3D3 137 aaKnown RBP9.8□□□□□ -0.84
CLDN11-209ENST00000489485 LY6G6CO95867 125 aa9.79□□□□□ -0.84
CLDN11-209ENST00000489485 LAGE3Q14657 143 aa9.79□□□□□ -0.84
CLDN11-209ENST00000489485 LGALS9CQ6DKI2 356 aa9.79□□□□□ -0.84
CLDN11-209ENST00000489485 TRBV6-8A0A0A6YYG3 113 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms