RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 D6R8Y8 96 aa10.52□□□□□ -0.73
SMIM11A-206ENST00000489469 SMKR1H3BMG3 65 aa10.52□□□□□ -0.73
SMIM11A-206ENST00000489469 GAS8-AS1O95177 125 aa10.52□□□□□ -0.73
SMIM11A-206ENST00000489469 PMCHP20382 165 aa10.52□□□□□ -0.73
SMIM11A-206ENST00000489469 RPS10P46783 165 aaKnown RBP10.52□□□□□ -0.73
SMIM11A-206ENST00000489469 SUMO2P61956 95 aaKnown RBP10.52□□□□□ -0.73
SMIM11A-206ENST00000489469 NTM-AS1Q6ZSK4 140 aa10.52□□□□□ -0.73
SMIM11A-206ENST00000489469 C6orf223Q8N319 242 aa10.52□□□□□ -0.73
SMIM11A-206ENST00000489469 NRACQ8N912 160 aa10.52□□□□□ -0.73
SMIM11A-206ENST00000489469 C20orf78Q9BR46 151 aa10.52□□□□□ -0.73
SMIM11A-206ENST00000489469 CHCHD5Q9BSY4 110 aa10.52□□□□□ -0.73
SMIM11A-206ENST00000489469 TMEM70Q9BUB7 260 aa10.52□□□□□ -0.73
SMIM11A-206ENST00000489469 TRBV27A0A0K0K1C4 114 aa10.51□□□□□ -0.73
SMIM11A-206ENST00000489469 HLA-DQA1P01909 254 aa10.51□□□□□ -0.73
SMIM11A-206ENST00000489469 AMTP48728 403 aa10.51□□□□□ -0.73
SMIM11A-206ENST00000489469 POLR2KP53803 58 aaKnown RBP10.51□□□□□ -0.73
SMIM11A-206ENST00000489469 ELOBQ15370 118 aa10.51□□□□□ -0.73
SMIM11A-206ENST00000489469 TMEM136Q6ZRR5 245 aa10.51□□□□□ -0.73
SMIM11A-206ENST00000489469 TMEM243Q9BU79 118 aa10.51□□□□□ -0.73
SMIM11A-206ENST00000489469 KRTAP1-5Q9BYS1 174 aa10.51□□□□□ -0.73
SMIM11A-206ENST00000489469 LAMTOR2Q9Y2Q5 125 aa10.51□□□□□ -0.73
SMIM11A-206ENST00000489469 RYR3Q15413 4870 aa10.5□□□□□ -0.73
SMIM11A-206ENST00000489469 VCYO14598 125 aa10.5□□□□□ -0.73
SMIM11A-206ENST00000489469 IGHV3-30P01768 117 aa10.5□□□□□ -0.73
SMIM11A-206ENST00000489469 IGHV3-33P01772 117 aa10.5□□□□□ -0.73
SMIM11A-206ENST00000489469 APCSP02743 223 aa10.5□□□□□ -0.73
SMIM11A-206ENST00000489469 IGHV3-30-3P0DP02 117 aa10.5□□□□□ -0.73
SMIM11A-206ENST00000489469 IGHV3-30-5P0DP03 117 aa10.5□□□□□ -0.73
SMIM11A-206ENST00000489469 RPL32P62910 135 aaKnown RBP10.5□□□□□ -0.73
SMIM11A-206ENST00000489469 LAGE3Q14657 143 aa10.5□□□□□ -0.73
SMIM11A-206ENST00000489469 NFE4Q86UQ8 179 aa10.5□□□□□ -0.73
SMIM11A-206ENST00000489469 GNB1LQ9BYB4 327 aa10.5□□□□□ -0.73
SMIM11A-206ENST00000489469 TMEM262E9PQX1 116 aa10.49□□□□□ -0.73
SMIM11A-206ENST00000489469 UBE2L6O14933 153 aa10.49□□□□□ -0.73
SMIM11A-206ENST00000489469 TCAPO15273 167 aa10.49□□□□□ -0.73
SMIM11A-206ENST00000489469 TNFRSF6BO95407 300 aa10.49□□□□□ -0.73
SMIM11A-206ENST00000489469 MT-ND6P03923 174 aa10.49□□□□□ -0.73
SMIM11A-206ENST00000489469 LINC00336Q6ZUF6 198 aa10.49□□□□□ -0.73
SMIM11A-206ENST00000489469 PRELID3AQ96N28 172 aa10.49□□□□□ -0.73
SMIM11A-206ENST00000489469 KIR2DL4Q99706 377 aa10.49□□□□□ -0.73
SMIM11A-206ENST00000489469 IBA57-AS1B1ANH7 110 aa10.48□□□□□ -0.73
SMIM11A-206ENST00000489469 H7C423 109 aa10.48□□□□□ -0.73
SMIM11A-206ENST00000489469 TRAV8-3A0A0A6YYJ7 113 aa10.46□□□□□ -0.73
SMIM11A-206ENST00000489469 NPYP01303 97 aa10.46□□□□□ -0.73
SMIM11A-206ENST00000489469 FCER1GP30273 86 aa10.46□□□□□ -0.73
SMIM11A-206ENST00000489469 GAGE6Q13070 117 aa10.46□□□□□ -0.73
SMIM11A-206ENST00000489469 SMIM2Q9BVW6 85 aa10.46□□□□□ -0.73
SMIM11A-206ENST00000489469 SMCO4Q9NRQ5 59 aa10.46□□□□□ -0.73
SMIM11A-206ENST00000489469 A0A1B0GUV1 79 aa10.45□□□□□ -0.74
SMIM11A-206ENST00000489469 RTL8CO15255 209 aa10.45□□□□□ -0.74
SMIM11A-206ENST00000489469 TSHBP01222 138 aa10.45□□□□□ -0.74
SMIM11A-206ENST00000489469 MPV17L2Q567V2 206 aa10.45□□□□□ -0.74
SMIM11A-206ENST00000489469 ATRAIDQ6UW56 229 aa10.45□□□□□ -0.74
SMIM11A-206ENST00000489469 MAP1LC3AQ9H492 121 aa10.45□□□□□ -0.74
SMIM11A-206ENST00000489469 TGIF2-C20orf24A0A0A6YYL0 155 aa10.44□□□□□ -0.74
SMIM11A-206ENST00000489469 PRSS47A8MTI9 375 aa10.44□□□□□ -0.74
SMIM11A-206ENST00000489469 RBX1P62877 108 aa10.44□□□□□ -0.74
SMIM11A-206ENST00000489469 SMAGPQ0VAQ4 97 aa10.44□□□□□ -0.74
SMIM11A-206ENST00000489469 Q8N3U1 123 aa10.44□□□□□ -0.74
SMIM11A-206ENST00000489469 DEFB104AQ8WTQ1 72 aa10.44□□□□□ -0.74
SMIM11A-206ENST00000489469 KLK12Q9UKR0 248 aa10.44□□□□□ -0.74
SMIM11A-206ENST00000489469 ANGP03950 147 aaKnown RBP10.43□□□□□ -0.74
SMIM11A-206ENST00000489469 ESDP10768 282 aa10.43□□□□□ -0.74
SMIM11A-206ENST00000489469 Q0VG73 95 aa10.43□□□□□ -0.74
SMIM11A-206ENST00000489469 AMMECR1LQ6DCA0 310 aa10.43□□□□□ -0.74
SMIM11A-206ENST00000489469 RMI2Q96E14 147 aa10.43□□□□□ -0.74
SMIM11A-206ENST00000489469 CRPP02741 224 aa10.42□□□□□ -0.74
SMIM11A-206ENST00000489469 ZNF25P17030 456 aaPredicted RBP10.42□□□□□ -0.74
SMIM11A-206ENST00000489469 Q8N976 141 aa10.42□□□□□ -0.74
SMIM11A-206ENST00000489469 TMEM18Q96B42 140 aa10.42□□□□□ -0.74
SMIM11A-206ENST00000489469 TM2D2Q9BX73 214 aa10.42□□□□□ -0.74
SMIM11A-206ENST00000489469 COX11Q9Y6N1 276 aa10.42□□□□□ -0.74
SMIM11A-206ENST00000489469 PRSS29PA6NIE9 313 aa10.41□□□□□ -0.74
SMIM11A-206ENST00000489469 RAB5AP20339 215 aa10.41□□□□□ -0.74
SMIM11A-206ENST00000489469 FABP9Q0Z7S8 132 aa10.41□□□□□ -0.74
SMIM11A-206ENST00000489469 Q9HAA7 133 aa10.41□□□□□ -0.74
SMIM11A-206ENST00000489469 TRAPPC1Q9Y5R8 145 aa10.41□□□□□ -0.74
SMIM11A-206ENST00000489469 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.4□□□□□ -0.74
SMIM11A-206ENST00000489469 IGKV2-29A2NJV5 120 aaPredicted RBP10.4□□□□□ -0.74
SMIM11A-206ENST00000489469 K7EMI3 77 aa10.4□□□□□ -0.74
SMIM11A-206ENST00000489469 FGF6P10767 208 aa10.4□□□□□ -0.74
SMIM11A-206ENST00000489469 KIAA1644Q3SXP7 199 aa10.4□□□□□ -0.74
SMIM11A-206ENST00000489469 Q6ZRN7 208 aaPredicted RBP10.4□□□□□ -0.74
SMIM11A-206ENST00000489469 Q8N8P6 123 aa10.4□□□□□ -0.74
SMIM11A-206ENST00000489469 UBE2WQ96B02 151 aa10.4□□□□□ -0.74
SMIM11A-206ENST00000489469 TMEM101Q96IK0 257 aa10.4□□□□□ -0.74
SMIM11A-206ENST00000489469 YPEL4Q96NS1 127 aa10.4□□□□□ -0.74
SMIM11A-206ENST00000489469 NXT2Q9NPJ8 142 aaKnown RBP10.4□□□□□ -0.74
SMIM11A-206ENST00000489469 FRAS1Q86XX4 4008 aa10.4□□□□□ -0.75
SMIM11A-206ENST00000489469 PSCAO43653 123 aa10.39□□□□□ -0.75
SMIM11A-206ENST00000489469 MIAQ16674 131 aa10.39□□□□□ -0.75
SMIM11A-206ENST00000489469 RNASEKQ6P5S7 137 aaKnown RBP10.39□□□□□ -0.75
SMIM11A-206ENST00000489469 MRPL52Q86TS9 123 aaKnown RBP10.39□□□□□ -0.75
SMIM11A-206ENST00000489469 CBLN2Q8IUK8 224 aa10.39□□□□□ -0.75
SMIM11A-206ENST00000489469 C20orf203Q8NBC4 194 aa10.39□□□□□ -0.75
SMIM11A-206ENST00000489469 PRR34Q9NV39 138 aa10.39□□□□□ -0.75
SMIM11A-206ENST00000489469 DNAH10Q8IVF4 4471 aa10.38□□□□□ -0.75
SMIM11A-206ENST00000489469 LOC389332A0A1B0GUA5 103 aa10.38□□□□□ -0.75
SMIM11A-206ENST00000489469 ALKBH7Q9BT30 221 aaPredicted RBP10.38□□□□□ -0.75
SMIM11A-206ENST00000489469 IGLV4-60A0A075B6I1 120 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms