RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.52□□□□□ -1.05
LINC00173-204ENST00000489452 A0A1B0GUV1 79 aa8.52□□□□□ -1.05
LINC00173-204ENST00000489452 XKRY2A2RUG3 117 aa8.52□□□□□ -1.05
LINC00173-204ENST00000489452 F2Z2F3 143 aa8.52□□□□□ -1.05
LINC00173-204ENST00000489452 TRGC1P0CF51 173 aa8.52□□□□□ -1.05
LINC00173-204ENST00000489452 SULT1A2P50226 295 aa8.52□□□□□ -1.05
LINC00173-204ENST00000489452 MED9Q9NWA0 146 aa8.52□□□□□ -1.05
LINC00173-204ENST00000489452 TRAV1-1A0A0B4J248 108 aa8.51□□□□□ -1.05
LINC00173-204ENST00000489452 GAGE12HA6NDE8 117 aa8.51□□□□□ -1.05
LINC00173-204ENST00000489452 AMTP48728 403 aa8.51□□□□□ -1.05
LINC00173-204ENST00000489452 COTL1Q14019 142 aa8.51□□□□□ -1.05
LINC00173-204ENST00000489452 DPH3P1Q9H4G8 78 aa8.51□□□□□ -1.05
LINC00173-204ENST00000489452 TEX46H3BTG2 121 aa8.5□□□□□ -1.05
LINC00173-204ENST00000489452 MT1HL1P0DM35 61 aa8.5□□□□□ -1.05
LINC00173-204ENST00000489452 TWIST1Q15672 202 aa8.5□□□□□ -1.05
LINC00173-204ENST00000489452 WDR73Q6P4I2 378 aa8.5□□□□□ -1.05
LINC00173-204ENST00000489452 NUDT10Q8NFP7 164 aa8.5□□□□□ -1.05
LINC00173-204ENST00000489452 NUDT11Q96G61 164 aa8.5□□□□□ -1.05
LINC00173-204ENST00000489452 TRBV20OR9-2A0A075B6H5 130 aa8.49□□□□□ -1.05
LINC00173-204ENST00000489452 TRAV26-2A0A0B4J265 109 aa8.49□□□□□ -1.05
LINC00173-204ENST00000489452 MEF2BQ02080 365 aaPredicted RBP8.49□□□□□ -1.05
LINC00173-204ENST00000489452 CIRBPQ14011 172 aaKnown RBP8.49□□□□□ -1.05
LINC00173-204ENST00000489452 HIGD2BQ4VC39 106 aa8.49□□□□□ -1.05
LINC00173-204ENST00000489452 C9orf62Q8N4C0 152 aa8.49□□□□□ -1.05
LINC00173-204ENST00000489452 PGLYRP4Q96LB8 373 aa8.49□□□□□ -1.05
LINC00173-204ENST00000489452 PDE6DO43924 150 aa8.48□□□□□ -1.05
LINC00173-204ENST00000489452 COX6A2Q02221 97 aa8.48□□□□□ -1.05
LINC00173-204ENST00000489452 CFAP161Q6P656 301 aa8.48□□□□□ -1.05
LINC00173-204ENST00000489452 Q6ZRU5 148 aa8.48□□□□□ -1.05
LINC00173-204ENST00000489452 C15orf56Q8N910 161 aa8.48□□□□□ -1.05
LINC00173-204ENST00000489452 GATD1Q8NB37 220 aa8.48□□□□□ -1.05
LINC00173-204ENST00000489452 FOXA3P55318 350 aaPredicted RBP8.47□□□□□ -1.05
LINC00173-204ENST00000489452 AMMECR1LQ6DCA0 310 aa8.47□□□□□ -1.05
LINC00173-204ENST00000489452 EIF5AL1Q6IS14 154 aaKnown RBP8.47□□□□□ -1.05
LINC00173-204ENST00000489452 RNASEKQ6P5S7 137 aaKnown RBP8.47□□□□□ -1.05
LINC00173-204ENST00000489452 SPACA4Q8TDM5 124 aa8.47□□□□□ -1.05
LINC00173-204ENST00000489452 GTSF1Q8WW33 167 aa8.47□□□□□ -1.05
LINC00173-204ENST00000489452 RPL39LQ96EH5 51 aaKnown RBP8.47□□□□□ -1.05
LINC00173-204ENST00000489452 SMIM12Q96EX1 92 aa8.47□□□□□ -1.05
LINC00173-204ENST00000489452 RNF185Q96GF1 192 aa8.47□□□□□ -1.05
LINC00173-204ENST00000489452 RNASE7Q9H1E1 156 aaKnown RBP8.47□□□□□ -1.05
LINC00173-204ENST00000489452 BIN3Q9NQY0 253 aa8.47□□□□□ -1.05
LINC00173-204ENST00000489452 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.46□□□□□ -1.06
LINC00173-204ENST00000489452 IGKV2-24A0A0C4DH68 120 aa8.46□□□□□ -1.06
LINC00173-204ENST00000489452 IGKV2-29A2NJV5 120 aaPredicted RBP8.46□□□□□ -1.06
LINC00173-204ENST00000489452 PHOX2AO14813 284 aa8.46□□□□□ -1.06
LINC00173-204ENST00000489452 RPS10P46783 165 aaKnown RBP8.46□□□□□ -1.06
LINC00173-204ENST00000489452 MAJINQ3KP22 176 aa8.46□□□□□ -1.06
LINC00173-204ENST00000489452 Q6ZNX1 250 aa8.46□□□□□ -1.06
LINC00173-204ENST00000489452 PRSS3P2Q8NHM4 247 aa8.46□□□□□ -1.06
LINC00173-204ENST00000489452 LYPD6BQ8NI32 183 aa8.46□□□□□ -1.06
LINC00173-204ENST00000489452 BCL2P10415 239 aa8.45□□□□□ -1.06
LINC00173-204ENST00000489452 CTRLP40313 264 aa8.45□□□□□ -1.06
LINC00173-204ENST00000489452 OCC1Q8TAD7 63 aa8.45□□□□□ -1.06
LINC00173-204ENST00000489452 C7orf33Q8WU49 177 aa8.45□□□□□ -1.06
LINC00173-204ENST00000489452 CHCHD10Q8WYQ3 142 aaPredicted RBP8.45□□□□□ -1.06
LINC00173-204ENST00000489452 RPP21Q9H633 154 aaKnown RBP8.45□□□□□ -1.06
LINC00173-204ENST00000489452 PLAC8Q9NZF1 115 aa8.45□□□□□ -1.06
LINC00173-204ENST00000489452 LRP2P98164 4655 aa8.44□□□□□ -1.06
LINC00173-204ENST00000489452 TNXBP22105 4242 aa8.43□□□□□ -1.06
LINC00173-204ENST00000489452 K7EN84 100 aa8.43□□□□□ -1.06
LINC00173-204ENST00000489452 FGF6P10767 208 aa8.43□□□□□ -1.06
LINC00173-204ENST00000489452 SMIM15Q7Z3B0 74 aa8.43□□□□□ -1.06
LINC00173-204ENST00000489452 STPG4Q8N801 248 aa8.43□□□□□ -1.06
LINC00173-204ENST00000489452 NDUFS6O75380 124 aaKnown RBP8.42□□□□□ -1.06
LINC00173-204ENST00000489452 APCSP02743 223 aa8.42□□□□□ -1.06
LINC00173-204ENST00000489452 PMCHP20382 165 aa8.42□□□□□ -1.06
LINC00173-204ENST00000489452 XCL1P47992 114 aa8.42□□□□□ -1.06
LINC00173-204ENST00000489452 LINC00526Q96FQ7 95 aa8.42□□□□□ -1.06
LINC00173-204ENST00000489452 CNFNQ9BYD5 112 aa8.42□□□□□ -1.06
LINC00173-204ENST00000489452 SDHAF1A6NFY7 115 aa8.41□□□□□ -1.06
LINC00173-204ENST00000489452 GATCO43716 136 aaKnown RBP8.4□□□□□ -1.06
LINC00173-204ENST00000489452 NCR2O95944 276 aa8.4□□□□□ -1.06
LINC00173-204ENST00000489452 FOXI1Q12951 378 aa8.4□□□□□ -1.06
LINC00173-204ENST00000489452 ODF1Q14990 250 aa8.4□□□□□ -1.06
LINC00173-204ENST00000489452 A0A096LNI7 61 aa8.39□□□□□ -1.07
LINC00173-204ENST00000489452 GVQW2A0A096LPI5 108 aaPredicted RBP8.39□□□□□ -1.07
LINC00173-204ENST00000489452 FAM231BA6NCW3 169 aa8.39□□□□□ -1.07
LINC00173-204ENST00000489452 CCL25O15444 150 aa8.39□□□□□ -1.07
LINC00173-204ENST00000489452 GAS8-AS1O95177 125 aa8.39□□□□□ -1.07
LINC00173-204ENST00000489452 CEBPGP53567 150 aa8.39□□□□□ -1.07
LINC00173-204ENST00000489452 TEX261Q6UWH6 196 aa8.39□□□□□ -1.07
LINC00173-204ENST00000489452 SLC51BQ86UW2 128 aa8.39□□□□□ -1.07
LINC00173-204ENST00000489452 TMEM101Q96IK0 257 aa8.39□□□□□ -1.07
LINC00173-204ENST00000489452 BTF3L4Q96K17 158 aa8.39□□□□□ -1.07
LINC00173-204ENST00000489452 LINC00959A0A1B0GUT2 108 aa8.38□□□□□ -1.07
LINC00173-204ENST00000489452 H7C423 109 aa8.38□□□□□ -1.07
LINC00173-204ENST00000489452 I3L3M4 83 aa8.38□□□□□ -1.07
LINC00173-204ENST00000489452 TAGLN2P37802 199 aaKnown RBP8.38□□□□□ -1.07
LINC00173-204ENST00000489452 PRR3P79522 188 aaKnown RBP8.38□□□□□ -1.07
LINC00173-204ENST00000489452 OR5A1Q8NGJ0 315 aa8.38□□□□□ -1.07
LINC00173-204ENST00000489452 RNF213Q63HN8 5207 aa8.37□□□□□ -1.07
LINC00173-204ENST00000489452 A8MWL6 223 aa8.37□□□□□ -1.07
LINC00173-204ENST00000489452 ST20Q9HBF5 79 aa8.37□□□□□ -1.07
LINC00173-204ENST00000489452 TMEM242Q9NWH2 141 aa8.37□□□□□ -1.07
LINC00173-204ENST00000489452 IGHV1-58A0A0C4DH39 117 aa8.36□□□□□ -1.07
LINC00173-204ENST00000489452 TSHBP01222 138 aa8.36□□□□□ -1.07
LINC00173-204ENST00000489452 ZNF25P17030 456 aaPredicted RBP8.36□□□□□ -1.07
LINC00173-204ENST00000489452 LINC01600Q96MT4 127 aa8.36□□□□□ -1.07
LINC00173-204ENST00000489452 ESDP10768 282 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms