RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 ZMAT4Q9H898 229 aa12.78□□□□□ -0.36
CD40-206ENST00000489304 NOTCH1P46531 2555 aa12.78□□□□□ -0.36
CD40-206ENST00000489304 IGIPA6NJ69 53 aa12.77□□□□□ -0.36
CD40-206ENST00000489304 RPL39P62891 51 aaKnown RBP12.77□□□□□ -0.36
CD40-206ENST00000489304 ODF1Q14990 250 aa12.77□□□□□ -0.36
CD40-206ENST00000489304 Q6ZN92 141 aa12.77□□□□□ -0.36
CD40-206ENST00000489304 DKK2Q9UBU2 259 aa12.77□□□□□ -0.36
CD40-206ENST00000489304 MAJINQ3KP22 176 aa12.76□□□□□ -0.37
CD40-206ENST00000489304 SPATA45Q537H7 98 aa12.76□□□□□ -0.37
CD40-206ENST00000489304 NBEAL1Q6ZS30 2694 aa12.76□□□□□ -0.37
CD40-206ENST00000489304 DNHD1Q96M86 4753 aa12.76□□□□□ -0.37
CD40-206ENST00000489304 TRAV12-1A0A0B4J245 112 aa12.76□□□□□ -0.37
CD40-206ENST00000489304 UBE2D3P61077 147 aa12.76□□□□□ -0.37
CD40-206ENST00000489304 UBE2D2P62837 147 aa12.76□□□□□ -0.37
CD40-206ENST00000489304 SBSPONQ8IVN8 264 aa12.76□□□□□ -0.37
CD40-206ENST00000489304 TMEM141Q96I45 108 aa12.76□□□□□ -0.37
CD40-206ENST00000489304 TIMM17AQ99595 171 aa12.76□□□□□ -0.37
CD40-206ENST00000489304 DEFB121Q5J5C9 76 aa12.75□□□□□ -0.37
CD40-206ENST00000489304 PHLDA1Q8WV24 401 aaPredicted RBP12.75□□□□□ -0.37
CD40-206ENST00000489304 A0A087WX48 190 aa12.74□□□□□ -0.37
CD40-206ENST00000489304 COTL1Q14019 142 aa12.74□□□□□ -0.37
CD40-206ENST00000489304 IGHV3-38A0A0C4DH36 116 aa12.74□□□□□ -0.37
CD40-206ENST00000489304 DAZ4Q86SG3 579 aaKnown RBP12.74□□□□□ -0.37
CD40-206ENST00000489304 BAALCQ8WXS3 180 aa12.74□□□□□ -0.37
CD40-206ENST00000489304 CHCHD7Q9BUK0 85 aa12.74□□□□□ -0.37
CD40-206ENST00000489304 DAZ3Q9NR90 486 aaKnown RBP12.74□□□□□ -0.37
CD40-206ENST00000489304 CELA1Q9UNI1 258 aa12.74□□□□□ -0.37
CD40-206ENST00000489304 hDV102S1A0JD36 115 aa12.73□□□□□ -0.37
CD40-206ENST00000489304 GAGE12JA6NER3 117 aa12.73□□□□□ -0.37
CD40-206ENST00000489304 GAGE1Q13065 139 aa12.73□□□□□ -0.37
CD40-206ENST00000489304 GAGE4Q13068 117 aa12.73□□□□□ -0.37
CD40-206ENST00000489304 GAGE5Q13069 117 aa12.73□□□□□ -0.37
CD40-206ENST00000489304 GAGE13Q4V321 117 aa12.73□□□□□ -0.37
CD40-206ENST00000489304 PRADC1Q9BSG0 188 aa12.73□□□□□ -0.37
CD40-206ENST00000489304 KRTAP21-3Q3LHN1 58 aa12.72□□□□□ -0.37
CD40-206ENST00000489304 MRAPQ8TCY5 172 aa12.72□□□□□ -0.37
CD40-206ENST00000489304 HHLA3Q9XRX5 114 aa12.72□□□□□ -0.37
CD40-206ENST00000489304 HSBP1L1C9JCN9 74 aa12.71□□□□□ -0.37
CD40-206ENST00000489304 SPART-AS1P0CW21 52 aa12.71□□□□□ -0.37
CD40-206ENST00000489304 DAD1P61803 113 aa12.71□□□□□ -0.37
CD40-206ENST00000489304 PYGO1Q9Y3Y4 419 aa12.71□□□□□ -0.37
CD40-206ENST00000489304 LOC100131303A0A0U1RQF7 123 aa12.71□□□□□ -0.38
CD40-206ENST00000489304 LINC00694P0DN24 101 aa12.71□□□□□ -0.38
CD40-206ENST00000489304 DDTP30046 118 aa12.71□□□□□ -0.38
CD40-206ENST00000489304 MRPL35Q9NZE8 188 aaKnown RBP12.71□□□□□ -0.38
CD40-206ENST00000489304 DPM2O94777 84 aa12.7□□□□□ -0.38
CD40-206ENST00000489304 CRYBA4P53673 196 aa12.7□□□□□ -0.38
CD40-206ENST00000489304 MGAM2Q2M2H8 2515 aa12.69□□□□□ -0.38
CD40-206ENST00000489304 TEX48A0A1B0GUV7 120 aa12.69□□□□□ -0.38
CD40-206ENST00000489304 PRSS29PA6NIE9 313 aa12.69□□□□□ -0.38
CD40-206ENST00000489304 F8VRH5 84 aa12.69□□□□□ -0.38
CD40-206ENST00000489304 IGKCP01834 107 aa12.69□□□□□ -0.38
CD40-206ENST00000489304 PRO0255Q9UI72 69 aa12.69□□□□□ -0.38
CD40-206ENST00000489304 LINC00587B1AMM8 73 aa12.68□□□□□ -0.38
CD40-206ENST00000489304 NPSP0C0P6 89 aa12.68□□□□□ -0.38
CD40-206ENST00000489304 IGLC3P0DOY3 106 aa12.68□□□□□ -0.38
CD40-206ENST00000489304 PMVKQ15126 192 aa12.68□□□□□ -0.38
CD40-206ENST00000489304 MIEN1Q9BRT3 115 aa12.68□□□□□ -0.38
CD40-206ENST00000489304 GTSF1LQ9H1H1 148 aa12.68□□□□□ -0.38
CD40-206ENST00000489304 CHTOPQ9Y3Y2 248 aaKnown RBP12.68□□□□□ -0.38
CD40-206ENST00000489304 PLNP26678 52 aa12.68□□□□□ -0.38
CD40-206ENST00000489304 NTM-AS1Q6ZSK4 140 aa12.68□□□□□ -0.38
CD40-206ENST00000489304 IGLV4-3A0A075B6K6 122 aa12.67□□□□□ -0.38
CD40-206ENST00000489304 ATP5G1P05496 136 aa12.67□□□□□ -0.38
CD40-206ENST00000489304 CST9LQ9H4G1 147 aa12.67□□□□□ -0.38
CD40-206ENST00000489304 SPANXA1Q9NS26 97 aa12.67□□□□□ -0.38
CD40-206ENST00000489304 OPRPNQ99935 248 aaPredicted RBP12.66□□□□□ -0.38
CD40-206ENST00000489304 C11orf68Q9H3H3 251 aaKnown RBP12.66□□□□□ -0.38
CD40-206ENST00000489304 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.65□□□□□ -0.38
CD40-206ENST00000489304 IGKV2-29A2NJV5 120 aaPredicted RBP12.65□□□□□ -0.38
CD40-206ENST00000489304 PAPPA-AS1Q5QFB9 102 aa12.65□□□□□ -0.38
CD40-206ENST00000489304 FAM104AQ969W3 186 aa12.65□□□□□ -0.38
CD40-206ENST00000489304 TIMM21Q9BVV7 248 aa12.65□□□□□ -0.38
CD40-206ENST00000489304 UBE2D4Q9Y2X8 147 aa12.65□□□□□ -0.38
CD40-206ENST00000489304 GYPEP15421 78 aa12.65□□□□□ -0.38
CD40-206ENST00000489304 ANKRD39Q53RE8 183 aa12.65□□□□□ -0.38
CD40-206ENST00000489304 STPG4Q8N801 248 aa12.65□□□□□ -0.38
CD40-206ENST00000489304 TM2D3Q9BRN9 247 aa12.65□□□□□ -0.38
CD40-206ENST00000489304 UQCR10Q9UDW1 63 aa12.65□□□□□ -0.38
CD40-206ENST00000489304 PAX4O43316 350 aa12.64□□□□□ -0.39
CD40-206ENST00000489304 ZC2HC1BQ5TFG8 222 aa12.64□□□□□ -0.39
CD40-206ENST00000489304 C14orf144Q96I85 54 aa12.64□□□□□ -0.39
CD40-206ENST00000489304 AMELXQ99217 191 aa12.63□□□□□ -0.39
CD40-206ENST00000489304 HUWE1Q7Z6Z7 4374 aaKnown RBP12.63□□□□□ -0.39
CD40-206ENST00000489304 A0A0J9YWU9 116 aa12.62□□□□□ -0.39
CD40-206ENST00000489304 TMEM97Q5BJF2 176 aa12.62□□□□□ -0.39
CD40-206ENST00000489304 CEMP1Q6PRD7 247 aaPredicted RBP12.62□□□□□ -0.39
CD40-206ENST00000489304 VSIG2Q96IQ7 327 aa12.62□□□□□ -0.39
CD40-206ENST00000489304 SPATA25Q9BR10 227 aa12.62□□□□□ -0.39
CD40-206ENST00000489304 VCX2Q9H322 139 aa12.62□□□□□ -0.39
CD40-206ENST00000489304 TENM3Q9P273 2699 aa12.62□□□□□ -0.39
CD40-206ENST00000489304 IGLV4-69A0A075B6H9 119 aa12.62□□□□□ -0.39
CD40-206ENST00000489304 C12orf74Q32Q52 190 aa12.62□□□□□ -0.39
CD40-206ENST00000489304 MRPL52Q86TS9 123 aaKnown RBP12.62□□□□□ -0.39
CD40-206ENST00000489304 MRPS36P82909 103 aaKnown RBP12.61□□□□□ -0.39
CD40-206ENST00000489304 ATP6V0E2Q8NHE4 81 aa12.61□□□□□ -0.39
CD40-206ENST00000489304 TMEM243Q9BU79 118 aa12.61□□□□□ -0.39
CD40-206ENST00000489304 TRBV25-1A0A075B6N4 114 aa12.6□□□□□ -0.39
CD40-206ENST00000489304 H7C423 109 aa12.6□□□□□ -0.39
CD40-206ENST00000489304 SMAGPQ0VAQ4 97 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms