RNA–Protein interactions for RNA: ENST00000489266.5

NSMCE4A-211, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best)

Gene NSMCE4A, Length 2,399 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-211ENST00000489266 ZNF292O60281 2723 aa15.66■□□□□ 0.1
NSMCE4A-211ENST00000489266 CUL9Q8IWT3 2517 aa15.66■□□□□ 0.1
NSMCE4A-211ENST00000489266 CD28P10747 220 aa15.65■□□□□ 0.1
NSMCE4A-211ENST00000489266 PYGO1Q9Y3Y4 419 aa15.65■□□□□ 0.1
NSMCE4A-211ENST00000489266 G3V318 75 aa15.64■□□□□ 0.09
NSMCE4A-211ENST00000489266 KLRB1Q12918 225 aa15.64■□□□□ 0.09
NSMCE4A-211ENST00000489266 NACAE9PAV3 2078 aa15.63■□□□□ 0.09
NSMCE4A-211ENST00000489266 RNF152Q8N8N0 203 aa15.62■□□□□ 0.09
NSMCE4A-211ENST00000489266 MGAQ8IWI9 3026 aa15.62■□□□□ 0.09
NSMCE4A-211ENST00000489266 KLLNB2CW77 178 aa15.61■□□□□ 0.09
NSMCE4A-211ENST00000489266 TINCRA0A1B0GVN0 87 aa15.61■□□□□ 0.09
NSMCE4A-211ENST00000489266 Q8N2B8 174 aa15.6■□□□□ 0.09
NSMCE4A-211ENST00000489266 LINC00308Q8TCZ7 52 aa15.6■□□□□ 0.09
NSMCE4A-211ENST00000489266 MAP1BP46821 2468 aaKnown RBP15.59■□□□□ 0.09
NSMCE4A-211ENST00000489266 ZFHX2Q9C0A1 2572 aaPredicted RBP15.58■□□□□ 0.08
NSMCE4A-211ENST00000489266 Q6JHZ5 121 aa15.58■□□□□ 0.08
NSMCE4A-211ENST00000489266 C9orf85Q96MD7 179 aa15.58■□□□□ 0.08
NSMCE4A-211ENST00000489266 NDUFA1O15239 70 aa15.57■□□□□ 0.08
NSMCE4A-211ENST00000489266 RNASE13Q5GAN3 156 aaKnown RBP15.57■□□□□ 0.08
NSMCE4A-211ENST00000489266 FAM218AQ96MZ4 157 aa15.57■□□□□ 0.08
NSMCE4A-211ENST00000489266 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.57■□□□□ 0.08
NSMCE4A-211ENST00000489266 K7ENP7 123 aa15.57■□□□□ 0.08
NSMCE4A-211ENST00000489266 RS1O15537 224 aa15.57■□□□□ 0.08
NSMCE4A-211ENST00000489266 AKAP13Q12802 2813 aa15.57■□□□□ 0.08
NSMCE4A-211ENST00000489266 UCNP55089 124 aa15.56■□□□□ 0.08
NSMCE4A-211ENST00000489266 CIRBPQ14011 172 aaKnown RBP15.56■□□□□ 0.08
NSMCE4A-211ENST00000489266 IGKV3D-7A0A0C4DH55 119 aa15.56■□□□□ 0.08
NSMCE4A-211ENST00000489266 UNQ9165/PRO28630Q6UXU0 137 aa15.56■□□□□ 0.08
NSMCE4A-211ENST00000489266 IGHV3-16A0A0C4DH30 117 aa15.55■□□□□ 0.08
NSMCE4A-211ENST00000489266 USP17L23D6RBM5 183 aa15.55■□□□□ 0.08
NSMCE4A-211ENST00000489266 MALP21145 153 aa15.55■□□□□ 0.08
NSMCE4A-211ENST00000489266 SYNJ2BPP57105 145 aa15.55■□□□□ 0.08
NSMCE4A-211ENST00000489266 LINC01561Q8N1V8 128 aa15.54■□□□□ 0.08
NSMCE4A-211ENST00000489266 A0A087WVE0 104 aa15.54■□□□□ 0.08
NSMCE4A-211ENST00000489266 NDUFA4O00483 81 aa15.54■□□□□ 0.08
NSMCE4A-211ENST00000489266 PRIMA1Q86XR5 153 aa15.54■□□□□ 0.08
NSMCE4A-211ENST00000489266 FAM223BA6NKX1 122 aa15.53■□□□□ 0.08
NSMCE4A-211ENST00000489266 DNAL4O96015 105 aa15.53■□□□□ 0.08
NSMCE4A-211ENST00000489266 FAM223AQ8IWN6 122 aa15.53■□□□□ 0.08
NSMCE4A-211ENST00000489266 LY6HO94772 140 aa15.52■□□□□ 0.08
NSMCE4A-211ENST00000489266 ZNF415Q09FC8 603 aa15.51■□□□□ 0.07
NSMCE4A-211ENST00000489266 SOSTDC1Q6X4U4 206 aa15.51■□□□□ 0.07
NSMCE4A-211ENST00000489266 GVINP1Q7Z2Y8 2422 aa15.51■□□□□ 0.07
NSMCE4A-211ENST00000489266 PCNX1Q96RV3 2341 aa15.51■□□□□ 0.07
NSMCE4A-211ENST00000489266 NBL1P41271 181 aa15.5■□□□□ 0.07
NSMCE4A-211ENST00000489266 C10orf105Q8TEF2 133 aa15.5■□□□□ 0.07
NSMCE4A-211ENST00000489266 FHL2Q14192 279 aa15.5■□□□□ 0.07
NSMCE4A-211ENST00000489266 Q9HAA7 133 aa15.5■□□□□ 0.07
NSMCE4A-211ENST00000489266 LINC00846Q9NV44 126 aa15.49■□□□□ 0.07
NSMCE4A-211ENST00000489266 ACACAQ13085 2346 aa15.49■□□□□ 0.07
NSMCE4A-211ENST00000489266 IGKV3-7A0A075B6H7 116 aa15.49■□□□□ 0.07
NSMCE4A-211ENST00000489266 IGHG2P01859 326 aa15.49■□□□□ 0.07
NSMCE4A-211ENST00000489266 COPS9Q8WXC6 57 aa15.49■□□□□ 0.07
NSMCE4A-211ENST00000489266 ADGRG4Q8IZF6 3080 aa15.48■□□□□ 0.07
NSMCE4A-211ENST00000489266 ANKRD11Q6UB99 2663 aaPredicted RBP15.48■□□□□ 0.07
NSMCE4A-211ENST00000489266 NDUFC2-KCTD14E9PQ53 114 aa15.48■□□□□ 0.07
NSMCE4A-211ENST00000489266 CDKN2A-AS1Q9UH64 79 aa15.48■□□□□ 0.07
NSMCE4A-211ENST00000489266 BSNQ9UPA5 3926 aa15.48■□□□□ 0.07
NSMCE4A-211ENST00000489266 CACNA1BQ00975 2339 aa15.47■□□□□ 0.07
NSMCE4A-211ENST00000489266 SPTBN2O15020 2390 aa15.47■□□□□ 0.07
NSMCE4A-211ENST00000489266 TRBV12-3P01733 135 aa15.47■□□□□ 0.07
NSMCE4A-211ENST00000489266 C19orf54Q5BKX5 351 aa15.47■□□□□ 0.07
NSMCE4A-211ENST00000489266 SIRPDQ9H106 197 aa15.47■□□□□ 0.07
NSMCE4A-211ENST00000489266 Q9H8V8 135 aa15.47■□□□□ 0.07
NSMCE4A-211ENST00000489266 MUC6Q6W4X9 2439 aa15.46■□□□□ 0.07
NSMCE4A-211ENST00000489266 PRO0628Q9UI54 55 aa15.46■□□□□ 0.07
NSMCE4A-211ENST00000489266 UBE2D4Q9Y2X8 147 aa15.46■□□□□ 0.07
NSMCE4A-211ENST00000489266 A0A0U1RRA0 63 aa15.46■□□□□ 0.06
NSMCE4A-211ENST00000489266 NDUFC2O95298 119 aa15.46■□□□□ 0.06
NSMCE4A-211ENST00000489266 C5orf56Q8N8D9 126 aa15.46■□□□□ 0.06
NSMCE4A-211ENST00000489266 C14orf132Q9NPU4 83 aa15.46■□□□□ 0.06
NSMCE4A-211ENST00000489266 PTPRZ1P23471 2315 aaPredicted RBP15.45■□□□□ 0.06
NSMCE4A-211ENST00000489266 ATMQ13315 3056 aa15.45■□□□□ 0.06
NSMCE4A-211ENST00000489266 MED13LQ71F56 2210 aa15.45■□□□□ 0.06
NSMCE4A-211ENST00000489266 C9orf129Q5T035 196 aaKnown RBP15.45■□□□□ 0.06
NSMCE4A-211ENST00000489266 IGLV5-45A0A087WSX0 123 aa15.44■□□□□ 0.06
NSMCE4A-211ENST00000489266 PFN2P35080 140 aa15.44■□□□□ 0.06
NSMCE4A-211ENST00000489266 ZFP36P26651 326 aaKnown RBP15.44■□□□□ 0.06
NSMCE4A-211ENST00000489266 ZNF625Q96I27 306 aaPredicted RBP15.44■□□□□ 0.06
NSMCE4A-211ENST00000489266 APC2O95996 2303 aa15.44■□□□□ 0.06
NSMCE4A-211ENST00000489266 OBSCN-AS1Q96MR7 158 aa15.43■□□□□ 0.06
NSMCE4A-211ENST00000489266 RHPN1-AS1Q9BWJ2 59 aa15.43■□□□□ 0.06
NSMCE4A-211ENST00000489266 HOXD3P31249 432 aaPredicted RBP15.42■□□□□ 0.06
NSMCE4A-211ENST00000489266 HIST2H2BCQ6DN03 193 aa15.42■□□□□ 0.06
NSMCE4A-211ENST00000489266 HIST2H2BDQ6DRA6 164 aa15.42■□□□□ 0.06
NSMCE4A-211ENST00000489266 LINC01560Q8TB33 94 aa15.42■□□□□ 0.06
NSMCE4A-211ENST00000489266 CHCHD7Q9BUK0 85 aa15.42■□□□□ 0.06
NSMCE4A-211ENST00000489266 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.42■□□□□ 0.06
NSMCE4A-211ENST00000489266 SAA4P35542 130 aa15.41■□□□□ 0.06
NSMCE4A-211ENST00000489266 RPL28P46779 137 aaKnown RBP15.41■□□□□ 0.06
NSMCE4A-211ENST00000489266 PIEZO2Q9H5I5 2752 aa15.41■□□□□ 0.06
NSMCE4A-211ENST00000489266 IGLV5-39A0A0G2JS06 123 aa15.4■□□□□ 0.06
NSMCE4A-211ENST00000489266 EPM2AB3EWF7 344 aa15.4■□□□□ 0.06
NSMCE4A-211ENST00000489266 LINC00336Q6ZUF6 198 aa15.4■□□□□ 0.06
NSMCE4A-211ENST00000489266 IGHV1OR15-1A0A075B7D0 117 aa15.39■□□□□ 0.05
NSMCE4A-211ENST00000489266 J3QLI3 93 aa15.39■□□□□ 0.05
NSMCE4A-211ENST00000489266 OVOL2Q9BRP0 275 aa15.39■□□□□ 0.05
NSMCE4A-211ENST00000489266 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.38■□□□□ 0.05
NSMCE4A-211ENST00000489266 TRAV12-2A0A075B6T6 113 aa15.38■□□□□ 0.05
NSMCE4A-211ENST00000489266 IGKV2-29A2NJV5 120 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms