RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-231	ENST00000489261	IGHV3-73	A0A0B4J1V6	119 aa		7.8	□□□□□ -1.16
ITSN1-231	ENST00000489261		A0A1B0GV90	55 aa		7.8	□□□□□ -1.16
ITSN1-231	ENST00000489261	NMU	P48645	174 aa		7.8	□□□□□ -1.16
ITSN1-231	ENST00000489261	HERVK_113	P61574	105 aa		7.8	□□□□□ -1.16
ITSN1-231	ENST00000489261	BATF	Q16520	125 aa		7.8	□□□□□ -1.16
ITSN1-231	ENST00000489261	KIR2DL5B	Q8NHK3	375 aa		7.8	□□□□□ -1.16
ITSN1-231	ENST00000489261	WIPF1	O43516	503 aa		7.79	□□□□□ -1.16
ITSN1-231	ENST00000489261	HINT1	P49773	126 aa	Predicted RBP	7.79	□□□□□ -1.16
ITSN1-231	ENST00000489261	RPL36A	P83881	106 aa	Known RBP	7.79	□□□□□ -1.16
ITSN1-231	ENST00000489261	COTL1	Q14019	142 aa		7.79	□□□□□ -1.16
ITSN1-231	ENST00000489261		Q6ZSN1	163 aa		7.79	□□□□□ -1.16
ITSN1-231	ENST00000489261	C2orf91	Q6ZV80	131 aa		7.79	□□□□□ -1.16
ITSN1-231	ENST00000489261	RPL36AL	Q969Q0	106 aa	Known RBP	7.79	□□□□□ -1.16
ITSN1-231	ENST00000489261	SPANXA1	Q9NS26	97 aa		7.79	□□□□□ -1.16
ITSN1-231	ENST00000489261	TRBV7-3	A0A075B6L6	115 aa		7.78	□□□□□ -1.16
ITSN1-231	ENST00000489261		E9PLD3	99 aa		7.78	□□□□□ -1.16
ITSN1-231	ENST00000489261	RPL39	P62891	51 aa	Known RBP	7.78	□□□□□ -1.16
ITSN1-231	ENST00000489261	SEC11A	P67812	179 aa		7.78	□□□□□ -1.16
ITSN1-231	ENST00000489261	HSD52	Q0P140	79 aa		7.78	□□□□□ -1.16
ITSN1-231	ENST00000489261	BVES-AS1	Q5T3Y7	98 aa		7.78	□□□□□ -1.16
ITSN1-231	ENST00000489261	DAZ4	Q86SG3	579 aa	Known RBP	7.78	□□□□□ -1.16
ITSN1-231	ENST00000489261	NFE4	Q86UQ8	179 aa		7.78	□□□□□ -1.16
ITSN1-231	ENST00000489261	TIMM21	Q9BVV7	248 aa		7.78	□□□□□ -1.16
ITSN1-231	ENST00000489261	VCX2	Q9H322	139 aa		7.78	□□□□□ -1.16
ITSN1-231	ENST00000489261	NOP10	Q9NPE3	64 aa	Known RBP	7.78	□□□□□ -1.16
ITSN1-231	ENST00000489261	DAZ3	Q9NR90	486 aa	Known RBP	7.78	□□□□□ -1.16
ITSN1-231	ENST00000489261	WNK1	Q9H4A3	2382 aa		7.77	□□□□□ -1.17
ITSN1-231	ENST00000489261	PKD1L1	Q8TDX9	2849 aa		7.77	□□□□□ -1.17
ITSN1-231	ENST00000489261	TRBV6-4	A0A1B0GX49	114 aa		7.77	□□□□□ -1.17
ITSN1-231	ENST00000489261	PLAC8L1	A1L4L8	177 aa		7.77	□□□□□ -1.17
ITSN1-231	ENST00000489261	C11orf86	A6NJI1	115 aa		7.77	□□□□□ -1.17
ITSN1-231	ENST00000489261		K7EQD1	137 aa		7.77	□□□□□ -1.17
ITSN1-231	ENST00000489261	APOC4	P55056	127 aa		7.77	□□□□□ -1.17
ITSN1-231	ENST00000489261	TAL2	Q16559	108 aa		7.77	□□□□□ -1.17
ITSN1-231	ENST00000489261	MPV17L2	Q567V2	206 aa		7.77	□□□□□ -1.17
ITSN1-231	ENST00000489261		Q6ZTI0	123 aa		7.77	□□□□□ -1.17
ITSN1-231	ENST00000489261	OR11H2	Q8NH07	326 aa		7.77	□□□□□ -1.17
ITSN1-231	ENST00000489261	WFDC10A	Q9H1F0	79 aa		7.77	□□□□□ -1.17
ITSN1-231	ENST00000489261	TRGV2	A0A075B6R0	118 aa		7.76	□□□□□ -1.17
ITSN1-231	ENST00000489261	PCP2	Q8IVA1	136 aa		7.76	□□□□□ -1.17
ITSN1-231	ENST00000489261	AMELX	Q99217	191 aa		7.76	□□□□□ -1.17
ITSN1-231	ENST00000489261	CHCHD7	Q9BUK0	85 aa		7.76	□□□□□ -1.17
ITSN1-231	ENST00000489261	ZMAT5	Q9UDW3	170 aa	Known RBP	7.76	□□□□□ -1.17
ITSN1-231	ENST00000489261	MGAM2	Q2M2H8	2515 aa		7.76	□□□□□ -1.17
ITSN1-231	ENST00000489261	IGLV4-69	A0A075B6H9	119 aa		7.75	□□□□□ -1.17
ITSN1-231	ENST00000489261	IGLV4-3	A0A075B6K6	122 aa		7.75	□□□□□ -1.17
ITSN1-231	ENST00000489261	IGKV2D-26	A0A0A0MRZ7	120 aa		7.75	□□□□□ -1.17
ITSN1-231	ENST00000489261		A6NDN8	102 aa		7.75	□□□□□ -1.17
ITSN1-231	ENST00000489261	MRPS36	P82909	103 aa	Known RBP	7.75	□□□□□ -1.17
ITSN1-231	ENST00000489261	LINC00612	Q8N6U2	182 aa		7.75	□□□□□ -1.17
ITSN1-231	ENST00000489261	ZNRF2	Q8NHG8	242 aa		7.75	□□□□□ -1.17
ITSN1-231	ENST00000489261	ORAOV1	Q8WV07	137 aa		7.75	□□□□□ -1.17
ITSN1-231	ENST00000489261	ZNF479	Q96JC4	524 aa		7.75	□□□□□ -1.17
ITSN1-231	ENST00000489261	GTSF1L	Q9H1H1	148 aa		7.75	□□□□□ -1.17
ITSN1-231	ENST00000489261	MYMX	A0A1B0GTQ4	84 aa		7.74	□□□□□ -1.17
ITSN1-231	ENST00000489261	GAGE12B	A1L429	117 aa		7.74	□□□□□ -1.17
ITSN1-231	ENST00000489261		H7C423	109 aa		7.74	□□□□□ -1.17
ITSN1-231	ENST00000489261	GAGE7	O76087	117 aa		7.74	□□□□□ -1.17
ITSN1-231	ENST00000489261	GAGE12F	P0CL80	117 aa		7.74	□□□□□ -1.17
ITSN1-231	ENST00000489261	GAGE12G	P0CL81	117 aa		7.74	□□□□□ -1.17
ITSN1-231	ENST00000489261	GAGE12I	P0CL82	117 aa		7.74	□□□□□ -1.17
ITSN1-231	ENST00000489261	UBE2D3	P61077	147 aa		7.74	□□□□□ -1.17
ITSN1-231	ENST00000489261	UBE2D2	P62837	147 aa		7.74	□□□□□ -1.17
ITSN1-231	ENST00000489261	PRADC1	Q9BSG0	188 aa		7.74	□□□□□ -1.17
ITSN1-231	ENST00000489261	CSDC2	Q9Y534	153 aa	Known RBP	7.74	□□□□□ -1.17
ITSN1-231	ENST00000489261	TRBV25-1	A0A075B6N4	114 aa		7.73	□□□□□ -1.17
ITSN1-231	ENST00000489261	TRAV8-6	A0A0B4J262	113 aa		7.73	□□□□□ -1.17
ITSN1-231	ENST00000489261	TRGV4	A0A0C4DH28	118 aa		7.73	□□□□□ -1.17
ITSN1-231	ENST00000489261	GAGE1	Q13065	139 aa		7.73	□□□□□ -1.17
ITSN1-231	ENST00000489261	UBE2D4	Q9Y2X8	147 aa		7.73	□□□□□ -1.17
ITSN1-231	ENST00000489261	CMYA5	Q8N3K9	4069 aa		7.72	□□□□□ -1.17
ITSN1-231	ENST00000489261	LYRM9	A8MSI8	78 aa		7.72	□□□□□ -1.17
ITSN1-231	ENST00000489261	SLC25A29	Q8N8R3	303 aa		7.72	□□□□□ -1.17
ITSN1-231	ENST00000489261	VWF	P04275	2813 aa		7.72	□□□□□ -1.17
ITSN1-231	ENST00000489261	TINCR	A0A1B0GVN0	87 aa		7.71	□□□□□ -1.18
ITSN1-231	ENST00000489261		H3BRM9	83 aa		7.71	□□□□□ -1.18
ITSN1-231	ENST00000489261	LEPROT	O15243	131 aa		7.71	□□□□□ -1.18
ITSN1-231	ENST00000489261	ZNF25	P17030	456 aa	Predicted RBP	7.71	□□□□□ -1.18
ITSN1-231	ENST00000489261	FHL2	Q14192	279 aa		7.71	□□□□□ -1.18
ITSN1-231	ENST00000489261	TMEM170B	Q5T4T1	132 aa		7.71	□□□□□ -1.18
ITSN1-231	ENST00000489261	DGAT2L7P	Q6IED9	249 aa		7.71	□□□□□ -1.18
ITSN1-231	ENST00000489261	MAPKAPK5-AS1	Q8N8E1	139 aa		7.71	□□□□□ -1.18
ITSN1-231	ENST00000489261	DEFB104A	Q8WTQ1	72 aa		7.71	□□□□□ -1.18
ITSN1-231	ENST00000489261	PHLDA1	Q8WV24	401 aa	Predicted RBP	7.71	□□□□□ -1.18
ITSN1-231	ENST00000489261	PLEKHB2	Q96CS7	222 aa		7.71	□□□□□ -1.18
ITSN1-231	ENST00000489261	CHAC1	Q9BUX1	264 aa		7.71	□□□□□ -1.18
ITSN1-231	ENST00000489261	TM2D2	Q9BX73	214 aa		7.71	□□□□□ -1.18
ITSN1-231	ENST00000489261	COX11	Q9Y6N1	276 aa		7.71	□□□□□ -1.18
ITSN1-231	ENST00000489261		X6R8D5	127 aa		7.71	□□□□□ -1.18
ITSN1-231	ENST00000489261	TMEM223	A0PJW6	202 aa		7.7	□□□□□ -1.18
ITSN1-231	ENST00000489261	GAGE12J	A6NER3	117 aa		7.7	□□□□□ -1.18
ITSN1-231	ENST00000489261	TCTA	P57738	103 aa		7.7	□□□□□ -1.18
ITSN1-231	ENST00000489261	TIRAP	P58753	221 aa		7.7	□□□□□ -1.18
ITSN1-231	ENST00000489261	GAGE4	Q13068	117 aa		7.7	□□□□□ -1.18
ITSN1-231	ENST00000489261	GAGE5	Q13069	117 aa		7.7	□□□□□ -1.18
ITSN1-231	ENST00000489261	GAGE13	Q4V321	117 aa		7.7	□□□□□ -1.18
ITSN1-231	ENST00000489261	TP73-AS1	Q9UF72	201 aa		7.7	□□□□□ -1.18
ITSN1-231	ENST00000489261		Q9UF83	564 aa		7.7	□□□□□ -1.18
ITSN1-231	ENST00000489261	NACA	E9PAV3	2078 aa		7.69	□□□□□ -1.18
ITSN1-231	ENST00000489261	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms