RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 TP53TG3Q9ULZ0 132 aa5.65□□□□□ -1.5
TRAPPC12-221ENST00000489032 GNRH2O43555 120 aa5.64□□□□□ -1.51
TRAPPC12-221ENST00000489032 SPINK4O60575 86 aa5.64□□□□□ -1.51
TRAPPC12-221ENST00000489032 SH2D1AO60880 128 aa5.64□□□□□ -1.51
TRAPPC12-221ENST00000489032 TCTAP57738 103 aa5.64□□□□□ -1.51
TRAPPC12-221ENST00000489032 C11orf72Q8NBR9 251 aa5.64□□□□□ -1.51
TRAPPC12-221ENST00000489032 PGLYRP4Q96LB8 373 aa5.64□□□□□ -1.51
TRAPPC12-221ENST00000489032 DNAH10Q8IVF4 4471 aa5.64□□□□□ -1.51
TRAPPC12-221ENST00000489032 IGHV3-16A0A0C4DH30 117 aa5.63□□□□□ -1.51
TRAPPC12-221ENST00000489032 A0A1B0GUT8 65 aa5.63□□□□□ -1.51
TRAPPC12-221ENST00000489032 A0A1B0GXF2 115 aa5.63□□□□□ -1.51
TRAPPC12-221ENST00000489032 IGLL5B9A064 214 aa5.63□□□□□ -1.51
TRAPPC12-221ENST00000489032 F5H768 121 aa5.63□□□□□ -1.51
TRAPPC12-221ENST00000489032 M0R2P5 195 aa5.63□□□□□ -1.51
TRAPPC12-221ENST00000489032 CFC1BP0CG36 223 aa5.63□□□□□ -1.51
TRAPPC12-221ENST00000489032 CFC1P0CG37 223 aa5.63□□□□□ -1.51
TRAPPC12-221ENST00000489032 SMIM6P0DI80 62 aa5.63□□□□□ -1.51
TRAPPC12-221ENST00000489032 ASIPP42127 132 aa5.63□□□□□ -1.51
TRAPPC12-221ENST00000489032 Q0VG73 95 aa5.63□□□□□ -1.51
TRAPPC12-221ENST00000489032 OR10J3Q5JRS4 329 aa5.63□□□□□ -1.51
TRAPPC12-221ENST00000489032 HIST3H2BBQ8N257 126 aa5.63□□□□□ -1.51
TRAPPC12-221ENST00000489032 MDFICQ9P1T7 246 aa5.63□□□□□ -1.51
TRAPPC12-221ENST00000489032 IGKV3D-20A0A0C4DH25 116 aa5.62□□□□□ -1.51
TRAPPC12-221ENST00000489032 F2Z2F3 143 aa5.62□□□□□ -1.51
TRAPPC12-221ENST00000489032 CRIP1P50238 77 aa5.62□□□□□ -1.51
TRAPPC12-221ENST00000489032 KRTAP5-3Q6L8H2 238 aa5.62□□□□□ -1.51
TRAPPC12-221ENST00000489032 Q6ZTI0 123 aa5.62□□□□□ -1.51
TRAPPC12-221ENST00000489032 BAGE3Q86Y29 109 aa5.62□□□□□ -1.51
TRAPPC12-221ENST00000489032 LINC00518Q8N0U6 118 aa5.62□□□□□ -1.51
TRAPPC12-221ENST00000489032 LINC00612Q8N6U2 182 aa5.62□□□□□ -1.51
TRAPPC12-221ENST00000489032 GTSF1Q8WW33 167 aa5.62□□□□□ -1.51
TRAPPC12-221ENST00000489032 NDUFAF3Q9BU61 184 aa5.62□□□□□ -1.51
TRAPPC12-221ENST00000489032 MRPL16Q9NX20 251 aaKnown RBP5.62□□□□□ -1.51
TRAPPC12-221ENST00000489032 TMSB15BA0A087X1C1 80 aa5.61□□□□□ -1.51
TRAPPC12-221ENST00000489032 SLAQ13239 276 aa5.61□□□□□ -1.51
TRAPPC12-221ENST00000489032 LGALS9CQ6DKI2 356 aa5.61□□□□□ -1.51
TRAPPC12-221ENST00000489032 FER1L6-AS1Q8NA97 138 aa5.61□□□□□ -1.51
TRAPPC12-221ENST00000489032 RASL10AQ92737 203 aa5.61□□□□□ -1.51
TRAPPC12-221ENST00000489032 PRAC1Q96KF2 57 aa5.61□□□□□ -1.51
TRAPPC12-221ENST00000489032 C18orf15Q96N68 181 aa5.61□□□□□ -1.51
TRAPPC12-221ENST00000489032 LITAFQ99732 161 aa5.61□□□□□ -1.51
TRAPPC12-221ENST00000489032 PHLDA3Q9Y5J5 127 aa5.61□□□□□ -1.51
TRAPPC12-221ENST00000489032 GRIFINA4D1Z8 144 aa5.6□□□□□ -1.51
TRAPPC12-221ENST00000489032 H3BVH4 76 aa5.6□□□□□ -1.51
TRAPPC12-221ENST00000489032 GZMBP10144 247 aa5.6□□□□□ -1.51
TRAPPC12-221ENST00000489032 ESDP10768 282 aa5.6□□□□□ -1.51
TRAPPC12-221ENST00000489032 FABP4P15090 132 aa5.6□□□□□ -1.51
TRAPPC12-221ENST00000489032 CTRLP40313 264 aa5.6□□□□□ -1.51
TRAPPC12-221ENST00000489032 DNLZQ5SXM8 178 aa5.6□□□□□ -1.51
TRAPPC12-221ENST00000489032 LINC00336Q6ZUF6 198 aa5.6□□□□□ -1.51
TRAPPC12-221ENST00000489032 C15orf53Q8NAA6 179 aa5.6□□□□□ -1.51
TRAPPC12-221ENST00000489032 GATD1Q8NB37 220 aa5.6□□□□□ -1.51
TRAPPC12-221ENST00000489032 OR4C5Q8NGB2 326 aa5.6□□□□□ -1.51
TRAPPC12-221ENST00000489032 OR10D4PQ8NGN7 298 aa5.6□□□□□ -1.51
TRAPPC12-221ENST00000489032 PACRGQ96M98 296 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC12-221ENST00000489032 C9orf85Q96MD7 179 aa5.6□□□□□ -1.51
TRAPPC12-221ENST00000489032 HIST1H2BLQ99880 126 aa5.6□□□□□ -1.51
TRAPPC12-221ENST00000489032 TPPP3Q9BW30 176 aa5.6□□□□□ -1.51
TRAPPC12-221ENST00000489032 HERC1Q15751 4861 aa5.6□□□□□ -1.51
TRAPPC12-221ENST00000489032 TRAV4A0A0B4J268 109 aa5.59□□□□□ -1.51
TRAPPC12-221ENST00000489032 TRGV4A0A0C4DH28 118 aa5.59□□□□□ -1.51
TRAPPC12-221ENST00000489032 IGHV3-53P01767 116 aa5.59□□□□□ -1.51
TRAPPC12-221ENST00000489032 ARMS2P0C7Q2 107 aa5.59□□□□□ -1.51
TRAPPC12-221ENST00000489032 IGLC6P0CF74 106 aa5.59□□□□□ -1.51
TRAPPC12-221ENST00000489032 RNASE3P12724 160 aaKnown RBP5.59□□□□□ -1.51
TRAPPC12-221ENST00000489032 SRIP30626 198 aa5.59□□□□□ -1.51
TRAPPC12-221ENST00000489032 PDZD11Q5EBL8 140 aa5.59□□□□□ -1.51
TRAPPC12-221ENST00000489032 LYZL1Q6UWQ5 148 aa5.59□□□□□ -1.51
TRAPPC12-221ENST00000489032 PTH2Q96A98 100 aa5.59□□□□□ -1.51
TRAPPC12-221ENST00000489032 C12orf57Q99622 126 aa5.59□□□□□ -1.51
TRAPPC12-221ENST00000489032 TRAV26-1A0A087WT03 109 aa5.58□□□□□ -1.52
TRAPPC12-221ENST00000489032 A8MWV9 139 aa5.58□□□□□ -1.52
TRAPPC12-221ENST00000489032 M0R381 172 aa5.58□□□□□ -1.52
TRAPPC12-221ENST00000489032 CACNG7P62955 275 aa5.58□□□□□ -1.52
TRAPPC12-221ENST00000489032 SPANXN1Q5VSR9 72 aa5.58□□□□□ -1.52
TRAPPC12-221ENST00000489032 SMIM15Q7Z3B0 74 aa5.58□□□□□ -1.52
TRAPPC12-221ENST00000489032 ALKBH7Q9BT30 221 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC12-221ENST00000489032 SAMD10Q9BYL1 202 aa5.58□□□□□ -1.52
TRAPPC12-221ENST00000489032 PRO0255Q9UI72 69 aa5.58□□□□□ -1.52
TRAPPC12-221ENST00000489032 APLNQ9ULZ1 77 aa5.58□□□□□ -1.52
TRAPPC12-221ENST00000489032 HHLA3Q9XRX5 114 aa5.58□□□□□ -1.52
TRAPPC12-221ENST00000489032 A0A0J9YY99 117 aa5.57□□□□□ -1.52
TRAPPC12-221ENST00000489032 A0A1B0GVY2 172 aa5.57□□□□□ -1.52
TRAPPC12-221ENST00000489032 RS1O15537 224 aa5.57□□□□□ -1.52
TRAPPC12-221ENST00000489032 SERF1AO75920 110 aa5.57□□□□□ -1.52
TRAPPC12-221ENST00000489032 OR5AL1P0C617 328 aa5.57□□□□□ -1.52
TRAPPC12-221ENST00000489032 P0DMU3 169 aa5.57□□□□□ -1.52
TRAPPC12-221ENST00000489032 FAM231AP0DMU4 169 aa5.57□□□□□ -1.52
TRAPPC12-221ENST00000489032 FAM231CP0DMU5 169 aa5.57□□□□□ -1.52
TRAPPC12-221ENST00000489032 UBE2DNLQ8IWF7 75 aa5.57□□□□□ -1.52
TRAPPC12-221ENST00000489032 CNFNQ9BYD5 112 aa5.57□□□□□ -1.52
TRAPPC12-221ENST00000489032 PKHD1P08F94 4074 aa5.57□□□□□ -1.52
TRAPPC12-221ENST00000489032 H3BNG1 76 aa5.56□□□□□ -1.52
TRAPPC12-221ENST00000489032 PPBPP02775 128 aa5.56□□□□□ -1.52
TRAPPC12-221ENST00000489032 SMIM17P0DL12 118 aa5.56□□□□□ -1.52
TRAPPC12-221ENST00000489032 NTF3P20783 257 aa5.56□□□□□ -1.52
TRAPPC12-221ENST00000489032 LBHQ53QV2 105 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC12-221ENST00000489032 ADAMTSL4-AS1Q5T5F5 129 aa5.56□□□□□ -1.52
TRAPPC12-221ENST00000489032 CFAP126Q5VTH2 177 aa5.56□□□□□ -1.52
TRAPPC12-221ENST00000489032 FAM104BQ5XKR9 115 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms