RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 BOLA2Q9H3K6 86 aa-0.87□□□□□ -2.55
CCDC93-209ENST00000488908 SPCS1Q9Y6A9 102 aa-0.87□□□□□ -2.55
CCDC93-209ENST00000488908 SPENQ96T58 3664 aaKnown RBP-0.87□□□□□ -2.55
CCDC93-209ENST00000488908 DNAH5Q8TE73 4624 aa-0.87□□□□□ -2.55
CCDC93-209ENST00000488908 EIF3AQ14152 1382 aaKnown RBP-0.87□□□□□ -2.55
CCDC93-209ENST00000488908 ANKRD50Q9ULJ7 1429 aa-0.88□□□□□ -2.55
CCDC93-209ENST00000488908 DNAH17Q9UFH2 4485 aa-0.88□□□□□ -2.55
CCDC93-209ENST00000488908 E7EQ34 232 aa-0.88□□□□□ -2.55
CCDC93-209ENST00000488908 CCDC179H3BU77 68 aa-0.88□□□□□ -2.55
CCDC93-209ENST00000488908 M0R2P5 195 aa-0.88□□□□□ -2.55
CCDC93-209ENST00000488908 YPEL1O60688 119 aa-0.88□□□□□ -2.55
CCDC93-209ENST00000488908 SLC25A5P05141 298 aaKnown RBP-0.88□□□□□ -2.55
CCDC93-209ENST00000488908 SLC25A6P12236 298 aa-0.88□□□□□ -2.55
CCDC93-209ENST00000488908 PSPHP78330 225 aa-0.88□□□□□ -2.55
CCDC93-209ENST00000488908 DCDP81605 110 aaKnown RBP-0.88□□□□□ -2.55
CCDC93-209ENST00000488908 C20orf197Q8N268 126 aa-0.88□□□□□ -2.55
CCDC93-209ENST00000488908 DYNLRB2Q8TF09 96 aa-0.88□□□□□ -2.55
CCDC93-209ENST00000488908 SLC35B3Q9H1N7 401 aa-0.88□□□□□ -2.55
CCDC93-209ENST00000488908 PHIPQ8WWQ0 1821 aa-0.88□□□□□ -2.55
CCDC93-209ENST00000488908 SPTAN1Q13813 2472 aaKnown RBP-0.88□□□□□ -2.55
CCDC93-209ENST00000488908 GOLGA3Q08378 1498 aa-0.88□□□□□ -2.55
CCDC93-209ENST00000488908 ARAP1Q96P48 1450 aa-0.88□□□□□ -2.55
CCDC93-209ENST00000488908 KNDC1Q76NI1 1749 aa-0.89□□□□□ -2.55
CCDC93-209ENST00000488908 A0A1B0GW64 132 aa-0.89□□□□□ -2.55
CCDC93-209ENST00000488908 G3V318 75 aa-0.89□□□□□ -2.55
CCDC93-209ENST00000488908 NCR2O95944 276 aa-0.89□□□□□ -2.55
CCDC93-209ENST00000488908 ALX1Q15699 326 aa-0.89□□□□□ -2.55
CCDC93-209ENST00000488908 TMEM78Q5T7P6 136 aa-0.89□□□□□ -2.55
CCDC93-209ENST00000488908 HRCT1Q6UXD1 115 aa-0.89□□□□□ -2.55
CCDC93-209ENST00000488908 STX12Q86Y82 276 aa-0.89□□□□□ -2.55
CCDC93-209ENST00000488908 MT1MQ8N339 61 aa-0.89□□□□□ -2.55
CCDC93-209ENST00000488908 CHMP6Q96FZ7 201 aa-0.89□□□□□ -2.55
CCDC93-209ENST00000488908 LINC00472Q9H8W2 130 aa-0.89□□□□□ -2.55
CCDC93-209ENST00000488908 SPEGQ15772 3267 aa-0.89□□□□□ -2.55
CCDC93-209ENST00000488908 CENPEQ02224 2701 aa-0.89□□□□□ -2.55
CCDC93-209ENST00000488908 CASZ1Q86V15 1759 aa-0.9□□□□□ -2.55
CCDC93-209ENST00000488908 SYNMO15061 1565 aa-0.9□□□□□ -2.55
CCDC93-209ENST00000488908 UHRF1BP1LA0JNW5 1464 aa-0.9□□□□□ -2.55
CCDC93-209ENST00000488908 MED23Q9ULK4 1368 aa-0.9□□□□□ -2.55
CCDC93-209ENST00000488908 C9orf92A6NGG3 77 aa-0.9□□□□□ -2.55
CCDC93-209ENST00000488908 MT2AP02795 61 aa-0.9□□□□□ -2.55
CCDC93-209ENST00000488908 S100A3P33764 101 aa-0.9□□□□□ -2.55
CCDC93-209ENST00000488908 POLR2HP52434 150 aaKnown RBP-0.9□□□□□ -2.55
CCDC93-209ENST00000488908 NPC2P61916 151 aa-0.9□□□□□ -2.55
CCDC93-209ENST00000488908 SPCS2Q15005 226 aa-0.9□□□□□ -2.55
CCDC93-209ENST00000488908 Q5VV11 94 aa-0.9□□□□□ -2.55
CCDC93-209ENST00000488908 ATP6V0E2Q8NHE4 81 aa-0.9□□□□□ -2.55
CCDC93-209ENST00000488908 THEM6Q8WUY1 208 aa-0.9□□□□□ -2.55
CCDC93-209ENST00000488908 MAFIPQ8WZ33 124 aa-0.9□□□□□ -2.55
CCDC93-209ENST00000488908 TRAPPC2LQ9UL33 140 aa-0.9□□□□□ -2.55
CCDC93-209ENST00000488908 PARP14Q460N5 1801 aa-0.9□□□□□ -2.55
CCDC93-209ENST00000488908 C10orf71Q711Q0 1435 aa-0.9□□□□□ -2.55
CCDC93-209ENST00000488908 NRXN2Q9P2S2 1712 aa-0.91□□□□□ -2.55
CCDC93-209ENST00000488908 BORCS7-ASMTA0A0B4J1R7 106 aa-0.91□□□□□ -2.56
CCDC93-209ENST00000488908 A0A1W2PRE2 83 aa-0.91□□□□□ -2.56
CCDC93-209ENST00000488908 NPFFO15130 113 aa-0.91□□□□□ -2.56
CCDC93-209ENST00000488908 TCRAP04437 139 aa-0.91□□□□□ -2.56
CCDC93-209ENST00000488908 H1FX-AS1Q4G0G2 97 aa-0.91□□□□□ -2.56
CCDC93-209ENST00000488908 SNX29P2Q8IUI4 249 aa-0.91□□□□□ -2.56
CCDC93-209ENST00000488908 ATPIF1Q9UII2 106 aa-0.91□□□□□ -2.56
CCDC93-209ENST00000488908 NOP16Q9Y3C1 178 aaKnown RBP-0.91□□□□□ -2.56
CCDC93-209ENST00000488908 CASKIN1Q8WXD9 1431 aa-0.91□□□□□ -2.56
CCDC93-209ENST00000488908 ZFHX4Q86UP3 3567 aa-0.91□□□□□ -2.56
CCDC93-209ENST00000488908 WDR7Q9Y4E6 1490 aa-0.92□□□□□ -2.56
CCDC93-209ENST00000488908 ROCK1Q13464 1354 aa-0.92□□□□□ -2.56
CCDC93-209ENST00000488908 CEP350Q5VT06 3117 aa-0.92□□□□□ -2.56
CCDC93-209ENST00000488908 TRAV12-3A0A0B4J271 114 aa-0.92□□□□□ -2.56
CCDC93-209ENST00000488908 MT1GP13640 62 aa-0.92□□□□□ -2.56
CCDC93-209ENST00000488908 COX6B1P14854 86 aa-0.92□□□□□ -2.56
CCDC93-209ENST00000488908 SPRR1BP22528 89 aa-0.92□□□□□ -2.56
CCDC93-209ENST00000488908 PIGYQ3MUY2 71 aa-0.92□□□□□ -2.56
CCDC93-209ENST00000488908 DEFB105AQ8NG35 78 aa-0.92□□□□□ -2.56
CCDC93-209ENST00000488908 WFDC6Q9BQY6 131 aa-0.92□□□□□ -2.56
CCDC93-209ENST00000488908 DNAH8Q96JB1 4490 aa-0.92□□□□□ -2.56
CCDC93-209ENST00000488908 CFAP54Q96N23 3096 aa-0.92□□□□□ -2.56
CCDC93-209ENST00000488908 PTPRMP28827 1452 aa-0.92□□□□□ -2.56
CCDC93-209ENST00000488908 WNK3Q9BYP7 1800 aa-0.93□□□□□ -2.56
CCDC93-209ENST00000488908 TRAV1-2A0A0B4J238 106 aa-0.93□□□□□ -2.56
CCDC93-209ENST00000488908 SSSCA1O60232 199 aa-0.93□□□□□ -2.56
CCDC93-209ENST00000488908 RBP4P02753 201 aa-0.93□□□□□ -2.56
CCDC93-209ENST00000488908 SMIM6P0DI80 62 aa-0.93□□□□□ -2.56
CCDC93-209ENST00000488908 EDDM3BP56851 147 aa-0.93□□□□□ -2.56
CCDC93-209ENST00000488908 TRIQKQ629K1 86 aa-0.93□□□□□ -2.56
CCDC93-209ENST00000488908 TMEM91Q6ZNR0 172 aa-0.93□□□□□ -2.56
CCDC93-209ENST00000488908 ATP11AUNQ6ZP68 121 aa-0.93□□□□□ -2.56
CCDC93-209ENST00000488908 C9orf62Q8N4C0 152 aa-0.93□□□□□ -2.56
CCDC93-209ENST00000488908 OR9Q1Q8NGQ5 310 aa-0.93□□□□□ -2.56
CCDC93-209ENST00000488908 CCDC115Q96NT0 180 aa-0.93□□□□□ -2.56
CCDC93-209ENST00000488908 AMELXQ99217 191 aa-0.93□□□□□ -2.56
CCDC93-209ENST00000488908 ZNF609O15014 1411 aa-0.93□□□□□ -2.56
CCDC93-209ENST00000488908 TROQ12816 1431 aaPredicted RBP-0.93□□□□□ -2.56
CCDC93-209ENST00000488908 TSC2P49815 1807 aa-0.94□□□□□ -2.56
CCDC93-209ENST00000488908 TRRAPQ9Y4A5 3859 aa-0.94□□□□□ -2.56
CCDC93-209ENST00000488908 CSMD2Q7Z408 3487 aa-0.94□□□□□ -2.56
CCDC93-209ENST00000488908 J3QLW9 94 aa-0.94□□□□□ -2.56
CCDC93-209ENST00000488908 SMIM24O75264 130 aa-0.94□□□□□ -2.56
CCDC93-209ENST00000488908 IFNGP01579 166 aa-0.94□□□□□ -2.56
CCDC93-209ENST00000488908 DEFB110Q30KQ9 67 aa-0.94□□□□□ -2.56
CCDC93-209ENST00000488908 HOPXQ9BPY8 73 aaPredicted RBP-0.94□□□□□ -2.56
CCDC93-209ENST00000488908 TP53AIP1Q9HCN2 124 aa-0.94□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms