RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 MRPS16Q9Y3D3 137 aaKnown RBP8.47□□□□□ -1.05
TRAIP-209ENST00000488860 VPS13DQ5THJ4 4388 aa8.46□□□□□ -1.06
TRAIP-209ENST00000488860 LY6G6CO95867 125 aa8.46□□□□□ -1.06
TRAIP-209ENST00000488860 FA2HQ7L5A8 372 aa8.46□□□□□ -1.06
TRAIP-209ENST00000488860 Q8N8P6 123 aa8.46□□□□□ -1.06
TRAIP-209ENST00000488860 CHCHD5Q9BSY4 110 aa8.46□□□□□ -1.06
TRAIP-209ENST00000488860 TMEM243Q9BU79 118 aa8.46□□□□□ -1.06
TRAIP-209ENST00000488860 NXT2Q9NPJ8 142 aaKnown RBP8.46□□□□□ -1.06
TRAIP-209ENST00000488860 DNAH1Q9P2D7 4330 aa8.45□□□□□ -1.06
TRAIP-209ENST00000488860 IGLV2-18A0A075B6J9 118 aa8.45□□□□□ -1.06
TRAIP-209ENST00000488860 PRSS47A8MTI9 375 aa8.45□□□□□ -1.06
TRAIP-209ENST00000488860 UBE2L6O14933 153 aa8.45□□□□□ -1.06
TRAIP-209ENST00000488860 LINC00476Q8WZB0 136 aa8.45□□□□□ -1.06
TRAIP-209ENST00000488860 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.44□□□□□ -1.06
TRAIP-209ENST00000488860 IGKV2-29A2NJV5 120 aaPredicted RBP8.44□□□□□ -1.06
TRAIP-209ENST00000488860 GAGE6Q13070 117 aa8.44□□□□□ -1.06
TRAIP-209ENST00000488860 LGALS9CQ6DKI2 356 aa8.44□□□□□ -1.06
TRAIP-209ENST00000488860 RNASEKQ6P5S7 137 aaKnown RBP8.44□□□□□ -1.06
TRAIP-209ENST00000488860 CHCHD7Q9BUK0 85 aa8.44□□□□□ -1.06
TRAIP-209ENST00000488860 C1orf196B1AJZ1 125 aa8.43□□□□□ -1.06
TRAIP-209ENST00000488860 TMEM262E9PQX1 116 aa8.43□□□□□ -1.06
TRAIP-209ENST00000488860 IGHV3-30P01768 117 aa8.43□□□□□ -1.06
TRAIP-209ENST00000488860 IGHV3-33P01772 117 aa8.43□□□□□ -1.06
TRAIP-209ENST00000488860 IGHV3-30-3P0DP02 117 aa8.43□□□□□ -1.06
TRAIP-209ENST00000488860 IGHV3-30-5P0DP03 117 aa8.43□□□□□ -1.06
TRAIP-209ENST00000488860 BAGE3Q86Y29 109 aa8.43□□□□□ -1.06
TRAIP-209ENST00000488860 UPK3BQ9BT76 320 aa8.43□□□□□ -1.06
TRAIP-209ENST00000488860 SIVA1O15304 175 aa8.42□□□□□ -1.06
TRAIP-209ENST00000488860 LAGE3Q14657 143 aa8.42□□□□□ -1.06
TRAIP-209ENST00000488860 A0A087WX48 190 aa8.41□□□□□ -1.06
TRAIP-209ENST00000488860 HIST1H2BKO60814 126 aa8.41□□□□□ -1.06
TRAIP-209ENST00000488860 HIST1H2BJP06899 126 aa8.41□□□□□ -1.06
TRAIP-209ENST00000488860 BTF3P20290 206 aaKnown RBP8.41□□□□□ -1.06
TRAIP-209ENST00000488860 HIST1H2BOP23527 126 aa8.41□□□□□ -1.06
TRAIP-209ENST00000488860 HIST1H2BBP33778 126 aa8.41□□□□□ -1.06
TRAIP-209ENST00000488860 HIST1H2BDP58876 126 aa8.41□□□□□ -1.06
TRAIP-209ENST00000488860 RAB5BP61020 215 aa8.41□□□□□ -1.06
TRAIP-209ENST00000488860 HIST1H2BCP62807 126 aa8.41□□□□□ -1.06
TRAIP-209ENST00000488860 HIST2H2BEQ16778 126 aa8.41□□□□□ -1.06
TRAIP-209ENST00000488860 ORMDL2Q53FV1 153 aa8.41□□□□□ -1.06
TRAIP-209ENST00000488860 MPV17L2Q567V2 206 aa8.41□□□□□ -1.06
TRAIP-209ENST00000488860 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.41□□□□□ -1.06
TRAIP-209ENST00000488860 AMMECR1LQ6DCA0 310 aa8.41□□□□□ -1.06
TRAIP-209ENST00000488860 NIT1Q86X76 327 aa8.41□□□□□ -1.06
TRAIP-209ENST00000488860 Q8N3U1 123 aa8.41□□□□□ -1.06
TRAIP-209ENST00000488860 HIST1H2BHQ93079 126 aa8.41□□□□□ -1.06
TRAIP-209ENST00000488860 HIST1H2BNQ99877 126 aa8.41□□□□□ -1.06
TRAIP-209ENST00000488860 HIST1H2BMQ99879 126 aa8.41□□□□□ -1.06
TRAIP-209ENST00000488860 Q9H8V8 135 aa8.41□□□□□ -1.06
TRAIP-209ENST00000488860 AP5S1Q9NUS5 200 aa8.41□□□□□ -1.06
TRAIP-209ENST00000488860 DNAH6Q9C0G6 4158 aa8.4□□□□□ -1.06
TRAIP-209ENST00000488860 K7EMI3 77 aa8.4□□□□□ -1.06
TRAIP-209ENST00000488860 LINC00614P0C842 121 aa8.4□□□□□ -1.06
TRAIP-209ENST00000488860 ESDP10768 282 aa8.4□□□□□ -1.06
TRAIP-209ENST00000488860 PKIAP61925 76 aa8.4□□□□□ -1.06
TRAIP-209ENST00000488860 RPL39P62891 51 aaKnown RBP8.4□□□□□ -1.06
TRAIP-209ENST00000488860 TMEM18Q96B42 140 aa8.4□□□□□ -1.06
TRAIP-209ENST00000488860 URB1-AS1Q96HZ7 61 aa8.4□□□□□ -1.06
TRAIP-209ENST00000488860 FGF6P10767 208 aa8.39□□□□□ -1.07
TRAIP-209ENST00000488860 Q0VG73 95 aa8.39□□□□□ -1.07
TRAIP-209ENST00000488860 PMCHL1Q16048 86 aa8.39□□□□□ -1.07
TRAIP-209ENST00000488860 Q8N976 141 aa8.39□□□□□ -1.07
TRAIP-209ENST00000488860 C20orf203Q8NBC4 194 aa8.39□□□□□ -1.07
TRAIP-209ENST00000488860 SERF1AO75920 110 aa8.38□□□□□ -1.07
TRAIP-209ENST00000488860 ANGP03950 147 aaKnown RBP8.38□□□□□ -1.07
TRAIP-209ENST00000488860 DNAH10OSP0CZ25 163 aa8.38□□□□□ -1.07
TRAIP-209ENST00000488860 RBX1P62877 108 aa8.38□□□□□ -1.07
TRAIP-209ENST00000488860 LINC01556Q5JQF7 62 aa8.38□□□□□ -1.07
TRAIP-209ENST00000488860 C2orf66Q6UXQ4 117 aa8.38□□□□□ -1.07
TRAIP-209ENST00000488860 CHCHD1Q96BP2 118 aaKnown RBP8.38□□□□□ -1.07
TRAIP-209ENST00000488860 TMEM101Q96IK0 257 aa8.38□□□□□ -1.07
TRAIP-209ENST00000488860 CYSLTR1Q9Y271 337 aa8.38□□□□□ -1.07
TRAIP-209ENST00000488860 LCE6AA0A183 80 aa8.37□□□□□ -1.07
TRAIP-209ENST00000488860 LINC01546A6NGU7 62 aa8.37□□□□□ -1.07
TRAIP-209ENST00000488860 H7C423 109 aa8.37□□□□□ -1.07
TRAIP-209ENST00000488860 M0R2N4 97 aa8.37□□□□□ -1.07
TRAIP-209ENST00000488860 HSBP1O75506 76 aa8.37□□□□□ -1.07
TRAIP-209ENST00000488860 NDUFA6P56556 154 aa8.37□□□□□ -1.07
TRAIP-209ENST00000488860 SMAGPQ0VAQ4 97 aa8.37□□□□□ -1.07
TRAIP-209ENST00000488860 CLPSL2Q6UWE3 100 aa8.37□□□□□ -1.07
TRAIP-209ENST00000488860 OR5A1Q8NGJ0 315 aa8.37□□□□□ -1.07
TRAIP-209ENST00000488860 UBE2D4Q9Y2X8 147 aa8.37□□□□□ -1.07
TRAIP-209ENST00000488860 SACSQ9NZJ4 4579 aa8.36□□□□□ -1.07
TRAIP-209ENST00000488860 IGLV4-60A0A075B6I1 120 aa8.36□□□□□ -1.07
TRAIP-209ENST00000488860 HBDP02042 147 aa8.36□□□□□ -1.07
TRAIP-209ENST00000488860 G0S2P27469 103 aa8.36□□□□□ -1.07
TRAIP-209ENST00000488860 LINC00310P59036 64 aa8.36□□□□□ -1.07
TRAIP-209ENST00000488860 DGAT2L7PQ6IED9 249 aa8.36□□□□□ -1.07
TRAIP-209ENST00000488860 KLK12Q9UKR0 248 aa8.36□□□□□ -1.07
TRAIP-209ENST00000488860 TRAV9-2A0A087WT02 112 aa8.35□□□□□ -1.07
TRAIP-209ENST00000488860 IGKV3OR2-268A0A0C4DH90 116 aa8.35□□□□□ -1.07
TRAIP-209ENST00000488860 NBDYA0A0U1RRE5 68 aa8.35□□□□□ -1.07
TRAIP-209ENST00000488860 CRPP02741 224 aa8.35□□□□□ -1.07
TRAIP-209ENST00000488860 ZNF25P17030 456 aaPredicted RBP8.35□□□□□ -1.07
TRAIP-209ENST00000488860 RNASE13Q5GAN3 156 aaKnown RBP8.35□□□□□ -1.07
TRAIP-209ENST00000488860 TTC32Q5I0X7 151 aa8.35□□□□□ -1.07
TRAIP-209ENST00000488860 Q6ZUT4 128 aa8.35□□□□□ -1.07
TRAIP-209ENST00000488860 MRPL52Q86TS9 123 aaKnown RBP8.35□□□□□ -1.07
TRAIP-209ENST00000488860 TOMM6Q96B49 74 aa8.35□□□□□ -1.07
TRAIP-209ENST00000488860 SPANXA1Q9NS26 97 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms